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Andrew Hipp

TitleCurator
InstitutionThe Morton Arboretum
DepartmentComm: Evolutionary Biology
AddressChicago IL 60637
Email
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    Collapse Overview 
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    Research: Plant systematics and population genetics, chromosome evolution, phylogenetic and comparative analysis


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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. McCormack ML, Kaproth MA, Cavender-Bares J, Carlson E, Hipp AL, Han Y, Kennedy PG. Climate and phylogenetic history structure morphological and architectural trait variation among fine-root orders. New Phytol. 2020 12; 228(6):1824-1834. PMID: 32654151.
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    2. Hoban S, Callicrate T, Clark J, Deans S, Dosmann M, Fant J, Gailing O, Havens K, Hipp AL, Kadav P, Kramer AT, Lobdell M, Magellan T, Meerow AW, Meyer A, Pooler M, Sanchez V, Spence E, Thompson P, Toppila R, Walsh S, Westwood M, Wood J, Griffith MP. Taxonomic similarity does not predict necessary sample size for ex situ conservation: a comparison among five genera. Proc Biol Sci. 2020 05 13; 287(1926):20200102. PMID: 32345167.
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    3. Larridon I, Villaverde T, Zuntini AR, Pokorny L, Brewer GE, Epitawalage N, Fairlie I, Hahn M, Kim J, Maguilla E, Maurin O, Xanthos M, Hipp AL, Forest F, Baker WJ. Tackling Rapid Radiations With Targeted Sequencing. Front Plant Sci. 2019; 10:1655. PMID: 31998342.
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    4. Kattge J, Bönisch G, Díaz S, Lavorel S, Prentice IC, Leadley P, Tautenhahn S, Werner GDA, Aakala T, Abedi M, Acosta ATR, Adamidis GC, Adamson K, Aiba M, Albert CH, Alcántara JM, Alcázar C C, Aleixo I, Ali H, Amiaud B, Ammer C, Amoroso MM, Anand M, Anderson C, Anten N, Antos J, Apgaua DMG, Ashman TL, Asmara DH, Asner GP, Aspinwall M, Atkin O, Aubin I, Baastrup-Spohr L, Bahalkeh K, Bahn M, Baker T, Baker WJ, Bakker JP, Baldocchi D, Baltzer J, Banerjee A, Baranger A, Barlow J, Barneche DR, Baruch Z, Bastianelli D, Battles J, Bauerle W, Bauters M, Bazzato E, Beckmann M, Beeckman H, Beierkuhnlein C, Bekker R, Belfry G, Belluau M, Beloiu M, Benavides R, Benomar L, Berdugo-Lattke ML, Berenguer E, Bergamin R, Bergmann J, Bergmann Carlucci M, Berner L, Bernhardt-Römermann M, Bigler C, Bjorkman AD, Blackman C, Blanco C, Blonder B, Blumenthal D, Bocanegra-González KT, Boeckx P, Bohlman S, Böhning-Gaese K, Boisvert-Marsh L, Bond W, Bond-Lamberty B, Boom A, Boonman CCF, Bordin K, Boughton EH, Boukili V, Bowman DMJS, Bravo S, Brendel MR, Broadley MR, Brown KA, Bruelheide H, Brumnich F, Bruun HH, Bruy D, Buchanan SW, Bucher SF, Buchmann N, Buitenwerf R, Bunker DE, Bürger J, Burrascano S, Burslem DFRP, Butterfield BJ, Byun C, Marques M, Scalon MC, Caccianiga M, Cadotte M, Cailleret M, Camac J, Camarero JJ, Campany C, Campetella G, Campos JA, Cano-Arboleda L, Canullo R, Carbognani M, Carvalho F, Casanoves F, Castagneyrol B, Catford JA, Cavender-Bares J, Cerabolini BEL, Cervellini M, Chacón-Madrigal E, Chapin K, Chapin FS, Chelli S, Chen SC, Chen A, Cherubini P, Chianucci F, Choat B, Chung KS, Chytrý M, Ciccarelli D, Coll L, Collins CG, Conti L, Coomes D, Cornelissen JHC, Cornwell WK, Corona P, Coyea M, Craine J, Craven D, Cromsigt JPGM, Csecserits A, Cufar K, Cuntz M, da Silva AC, Dahlin KM, Dainese M, Dalke I, Dalle Fratte M, Dang-Le AT, Danihelka J, Dannoura M, Dawson S, de Beer AJ, De Frutos A, De Long JR, Dechant B, Delagrange S, Delpierre N, Derroire G, Dias AS, Diaz-Toribio MH, Dimitrakopoulos PG, Dobrowolski M, Doktor D, Drevojan P, Dong N, Dransfield J, Dressler S, Duarte L, Ducouret E, Dullinger S, Durka W, Duursma R, Dymova O, E-Vojtkó A, Eckstein RL, Ejtehadi H, Elser J, Emilio T, Engemann K, Erfanian MB, Erfmeier A, Esquivel-Muelbert A, Esser G, Estiarte M, Domingues TF, Fagan WF, Fagúndez J, Falster DS, Fan Y, Fang J, Farris E, Fazlioglu F, Feng Y, Fernandez-Mendez F, Ferrara C, Ferreira J, Fidelis A, Finegan B, Firn J, Flowers TJ, Flynn DFB, Fontana V, Forey E, Forgiarini C, François L, Frangipani M, Frank D, Frenette-Dussault C, Freschet GT, Fry EL, Fyllas NM, Mazzochini GG, Gachet S, Gallagher R, Ganade G, Ganga F, García-Palacios P, Gargaglione V, Garnier E, Garrido JL, de Gasper AL, Gea-Izquierdo G, Gibson D, Gillison AN, Giroldo A, Glasenhardt MC, Gleason S, Gliesch M, Goldberg E, Göldel B, Gonzalez-Akre E, Gonzalez-Andujar JL, González-Melo A, González-Robles A, Graae BJ, Granda E, Graves S, Green WA, Gregor T, Gross N, Guerin GR, Günther A, Gutiérrez AG, Haddock L, Haines A, Hall J, Hambuckers A, Han W, Harrison SP, Hattingh W, Hawes JE, He T, He P, Heberling JM, Helm A, Hempel S, Hentschel J, Hérault B, Heres AM, Herz K, Heuertz M, Hickler T, Hietz P, Higuchi P, Hipp AL, Hirons A, Hock M, Hogan JA, Holl K, Honnay O, Hornstein D, Hou E, Hough-Snee N, Hovstad KA, Ichie T, Igic B, Illa E, Isaac M, Ishihara M, Ivanov L, Ivanova L, Iversen CM, Izquierdo J, Jackson RB, Jackson B, Jactel H, Jagodzinski AM, Jandt U, Jansen S, Jenkins T, Jentsch A, Jespersen JRP, Jiang GF, Johansen JL, Johnson D, Jokela EJ, Joly CA, Jordan GJ, Joseph GS, Junaedi D, Junker RR, Justes E, Kabzems R, Kane J, Kaplan Z, Kattenborn T, Kavelenova L, Kearsley E, Kempel A, Kenzo T, Kerkhoff A, Khalil MI, Kinlock NL, Kissling WD, Kitajima K, Kitzberger T, Kjøller R, Klein T, Kleyer M, Klimešová J, Klipel J, Kloeppel B, Klotz S, Knops JMH, Kohyama T, Koike F, Kollmann J, Komac B, Komatsu K, König C, Kraft NJB, Kramer K, Kreft H, Kühn I, et al. TRY plant trait database - enhanced coverage and open access. Glob Chang Biol. 2020 01; 26(1):119-188. PMID: 31891233.
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    5. Yan M, Liu R, Li Y, Hipp AL, Deng M, Xiong Y. Ancient events and climate adaptive capacity shaped distinct chloroplast genetic structure in the oak lineages. BMC Evol Biol. 2019 11 04; 19(1):202. PMID: 31684859.
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    6. Hipp AL, Manos PS, Hahn M, Avishai M, Bodénès C, Cavender-Bares J, Crowl AA, Deng M, Denk T, Fitz-Gibbon S, Gailing O, González-Elizondo MS, González-Rodríguez A, Grimm GW, Jiang XL, Kremer A, Lesur I, McVay JD, Plomion C, Rodríguez-Correa H, Schulze ED, Simeone MC, Sork VL, Valencia-Avalos S. Genomic landscape of the global oak phylogeny. . 2020 05; 226(4):1198-1212. PMID: 31609470.
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    7. Timing and ecological priority shaped the diversification of sedges in the Himalayas. PeerJ. 2019; 7:e6792. PMID: 31211007.
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    8. Crowl AA, Manos PS, McVay JD, Lemmon AR, Lemmon EM, Hipp AL. Uncovering the genomic signature of ancient introgression between white oak lineages (Quercus). . 2020 05; 226(4):1158-1170. PMID: 30963585.
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    9. Fitzek E, Delcamp A, Guichoux E, Hahn M, Lobdell M, Hipp AL. A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting. Ecol Evol. 2018 Jun; 8(11):5837-5851. PMID: 29938097.
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    10. Cannon CH, Brendel O, Deng M, Hipp AL, Kremer A, Kua CS, Plomion C, Romero-Severson J, Sork VL. Gaining a global perspective on Fagaceae genomic diversification and adaptation. . 2018 05; 218(3):894-897. PMID: 29658637.
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    11. Cavender-Bares J, Kothari S, Meireles JE, Kaproth MA, Manos PS, Hipp AL. The role of diversification in community assembly of the oaks (Quercus L.) across the continental U.S. Am J Bot. 2018 03; 105(3):565-586. PMID: 29689630.
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    12. Escudero M, Hahn M, Hipp AL. RAD-seq linkage mapping and patterns of segregation distortion in sedges: meiosis as a driver of karyotypic evolution in organisms with holocentric chromosomes. J Evol Biol. 2018 06; 31(6):833-843. PMID: 29573004.
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    13. Deng M, Jiang XL, Hipp AL, Manos PS, Hahn M. Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia. Mol Phylogenet Evol. 2018 02; 119:170-181. PMID: 29175095.
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    14. Hauser DA, Keuter A, McVay JD, Hipp AL, Manos PS. The evolution and diversification of the red oaks of the California Floristic Province (Quercus section Lobatae, series Agrifoliae). Am J Bot. 2017 10; 104(10):1581-1595. PMID: 29885216.
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    15. Maguilla E, Escudero M, Hipp AL, Luceño M. Allopatric speciation despite historical gene flow: Divergence and hybridization in Carex furva and C. lucennoiberica (Cyperaceae) inferred from plastid and nuclear RAD-seq data. Mol Ecol. 2017 Oct; 26(20):5646-5662. PMID: 28742230.
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    16. Hipp AL, Manos PS, González-Rodríguez A, Hahn M, Kaproth M, McVay JD, Avalos SV, Cavender-Bares J. Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity. . 2018 Jan; 217(1):439-452. PMID: 28921530.
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    17. Hipp AL, Gonzalez-Martinez SC, Jaramillo-Correa JP. The Evolution of Tree Diversity: Proceedings of the 2016 IUFRO Genomics and Forest Tree Genetics Conference, Phylogenetics and Genomic Evolution Session, Arcachon, France. Genome. 2017 09; 60(9):v-vi. PMID: 28885056.
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    18. Dolan RW, Aronson MFJ, Hipp AL. Floristic response to urbanization: Filtering of the bioregional flora in Indianapolis, Indiana, USA. Am J Bot. 2017 Aug; 104(8):1179-1187. PMID: 28794058.
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    19. McVay JD, Hauser D, Hipp AL, Manos PS. Phylogenomics reveals a complex evolutionary history of lobed-leaf white oaks in western North America. Genome. 2017 Sep; 60(9):733-742. PMID: 28727934.
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    20. McVay JD, Hipp AL, Manos PS. A genetic legacy of introgression confounds phylogeny and biogeography in oaks. Proc Biol Sci. 2017 May 17; 284(1854). PMID: 28515204.
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    21. Pham KK, Hipp AL, Manos PS, Cronn RC. A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny. Genome. 2017 Sep; 60(9):720-732. PMID: 28445658.
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    22. Fitz-Gibbon S, Hipp AL, Pham KK, Manos PS, Sork VL. Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus). Genome. 2017 Sep; 60(9):743-755. PMID: 28355490.
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    23. Escudero M, Hahn M, Brown BH, Lueders K, Hipp AL. Chromosomal rearrangements in holocentric organisms lead to reproductive isolation by hybrid dysfunction: The correlation between karyotype rearrangements and germination rates in sedges. Am J Bot. 2016 08; 103(8):1529-36. PMID: 27558707.
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    24. Larkin DJ, Jacobi SK, Hipp AL, Kramer AT. Keeping All the PIECES: Phylogenetically Informed Ex Situ Conservation of Endangered Species. PLoS One. 2016; 11(6):e0156973. PMID: 27257671.
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    25. Eaton DA, Hipp AL, González-Rodríguez A, Cavender-Bares J. Historical introgression among the American live oaks and the comparative nature of tests for introgression. Evolution. 2015 Oct; 69(10):2587-601. PMID: 26299374.
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    26. Maguilla E, Escudero M, Waterway MJ, Hipp AL, Luceño M. Phylogeny, systematics, and trait evolution of Carex section Glareosae. Am J Bot. 2015 Jul; 102(7):1128-44. PMID: 26199369.
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    27. Hipp AL, Larkin DJ, Barak RS, Bowles ML, Cadotte MW, Jacobi SK, Lonsdorf E, Scharenbroch BC, Williams E, Weiher E. Phylogeny in the service of ecological restoration. Am J Bot. 2015 May; 102(5):647-8. PMID: 26022478.
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    28. Pearse IS, Hipp AL. Native plant diversity increases herbivory to non-natives. Proc Biol Sci. 2014 11 07; 281(1794):20141841. PMID: 25232143.
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    29. Escudero M, Eaton DA, Hahn M, Hipp AL. Genotyping-by-sequencing as a tool to infer phylogeny and ancestral hybridization: a case study in Carex (Cyperaceae). Mol Phylogenet Evol. 2014 Oct; 79:359-67. PMID: 25010772.
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    30. Begley-Miller DR, Hipp AL, Brown BH, Hahn M, Rooney TP. White-tailed deer are a biotic filter during community assembly, reducing species and phylogenetic diversity. AoB Plants. 2014 Jun 09; 6. PMID: 24916059.
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    31. Hipp AL, Eaton DA, Cavender-Bares J, Fitzek E, Nipper R, Manos PS. A framework phylogeny of the American oak clade based on sequenced RAD data. PLoS One. 2014; 9(4):e93975. PMID: 24705617.
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    32. Escudero M, Martín-Bravo S, Mayrose I, Fernández-Mazuecos M, Fiz-Palacios O, Hipp AL, Pimentel M, Jiménez-Mejías P, Valcárcel V, Vargas P, Luceño M. Karyotypic changes through dysploidy persist longer over evolutionary time than polyploid changes. PLoS One. 2014; 9(1):e85266. PMID: 24416374.
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    33. Escudero M, Hipp A. Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). Am J Bot. 2013 Dec; 100(12):2403-11. PMID: 24249788.
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    34. Escudero M, Weber JA, Hipp AL. Species coherence in the face of karyotype diversification in holocentric organisms: the case of a cytogenetically variable sedge (Carex scoparia, Cyperaceae). Ann Bot. 2013 Aug; 112(3):515-26. PMID: 23723260.
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    35. Escudero M, Hipp AL, Hansen TF, Voje KL, Luceño M. Selection and inertia in the evolution of holocentric chromosomes in sedges (Carex, Cyperaceae). . 2012 Jul; 195(1):237-47. PMID: 22489934.
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    36. Chung KS, Hipp AL, Roalson EH. Chromosome number evolves independently of genome size in a clade with nonlocalized centromeres (Carex: Cyperaceae). Evolution. 2012 Sep; 66(9):2708-22. PMID: 22946798.
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    37. Pearse IS, Hipp AL. Global patterns of leaf defenses in oak species. Evolution. 2012 Jul; 66(7):2272-86. PMID: 22759301.
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    38. Escudero M, Hipp AL, Waterway MJ, Valente LM. Diversification rates and chromosome evolution in the most diverse angiosperm genus of the temperate zone (Carex, Cyperaceae). Mol Phylogenet Evol. 2012 Jun; 63(3):650-5. PMID: 22366369.
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    39. Eastman JM, Alfaro ME, Joyce P, Hipp AL, Harmon LJ. A novel comparative method for identifying shifts in the rate of character evolution on trees. Evolution. 2011 Dec; 65(12):3578-89. PMID: 22133227.
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    40. Chung KS, Weber JA, Hipp AL. Dynamics of chromosome number and genome size variation in a cytogenetically variable sedge (Carex scoparia var. scoparia, Cyperaceae). Am J Bot. 2011 Jan; 98(1):122-9. PMID: 21613090.
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    41. Hipp AL, Rothrock PE, Whitkus R, Weber JA. Chromosomes tell half of the story: the correlation between karyotype rearrangements and genetic diversity in sedges, a group with holocentric chromosomes. Mol Ecol. 2010 Aug; 19(15):3124-38. PMID: 20618902.
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    42. Escudero M, Hipp AL, Luceño M. Karyotype stability and predictors of chromosome number variation in sedges: a study in Carex section Spirostachyae (Cyperaceae). Mol Phylogenet Evol. 2010 Oct; 57(1):353-63. PMID: 20655386.
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    43. Hipp AL, Escudero M. MATICCE: mapping transitions in continuous character evolution. Bioinformatics. 2010 Jan 01; 26(1):132-3. PMID: 19880368.
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    44. Hipp AL, Kettenring KM, Feldheim KA, Weber JA. Isolation of 11 polymorphic tri- and tetranucleotide microsatellite loci in a North American sedge (Carex scoparia: Cyperaceae) and cross-species amplification in three additional Carex species. Mol Ecol Resour. 2009 Mar; 9(2):625-7. PMID: 21564711.
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    45. Lumbsch HT, Hipp AL, Divakar PK, Blanco O, Crespo A. Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota). BMC Evol Biol. 2008 Sep 22; 8:257. PMID: 18808710.
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    46. Hipp AL. Nonuniform processes of chromosome evolution in sedges (Carex: Cyperaceae). Evolution. 2007 Sep; 61(9):2175-94. PMID: 17767589.
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    47. Luo R, Hipp AL, Larget B. A Bayesian model of AFLP marker evolution and phylogenetic inference. Stat Appl Genet Mol Biol. 2007; 6:Article11. PMID: 17474877.
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    48. van Ee BW, Jelinski N, Berry PE, Hipp AL. Phylogeny and biogeography of Croton alabamensis (Euphorbiaceae), a rare shrub from Texas and Alabama, using DNA sequence and AFLP data. Mol Ecol. 2006 Sep; 15(10):2735-51. PMID: 16911197.
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    49. Berry PE, Hipp AL, Wurdack KJ, Van Ee B, Riina R. Molecular phylogenetics of the giant genus Croton and tribe Crotoneae (Euphorbiaceae sensu stricto) using ITS and TRNL-TRNF DNA sequence data. Am J Bot. 2005 Sep; 92(9):1520-34. PMID: 21646170.
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