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Bohdan Khomtchouk

TitleInstructor
InstitutionUniversity of Chicago
DepartmentMedicine-Computational Biomedicine and Biomedical Data Science
AddressChicago IL 60637
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Khomtchouk KM, Joseph LI, Khomtchouk BB, Kouhi A, Massa S, Xia A, Koliesnik I, Pletzer D, Bollyky PL, Santa Maria PL. Treatment with a neutrophil elastase inhibitor and ofloxacin reduces P. aeruginosa burden in a mouse model of chronic suppurative otitis media. NPJ Biofilms Microbiomes. 2021 04 06; 7(1):31. PMID: 33824337.
      View in: PubMed
    2. Khomtchouk BB, Nelson CS, Vand KA, Palmisano S, Grossman RL. HeartBioPortal2.0: new developments and updates for genetic ancestry and cardiometabolic quantitative traits in diverse human populations. Database (Oxford). 2020 12 31; 2020. PMID: 33382884.
      View in: PubMed
    3. Khomtchouk BB, Tran DT, Vand KA, Might M, Gozani O, Assimes TL. Cardioinformatics: the nexus of bioinformatics and precision cardiology. Brief Bioinform. 2020 12 01; 21(6):2031-2051. PMID: 31802103.
      View in: PubMed
    4. Johnstone AL, Andrade NS, Barbier E, Khomtchouk BB, Rienas CA, Lowe K, Van Booven DJ, Domi E, Esanov R, Vilca S, Tapocik JD, Rodriguez K, Maryanski D, Keogh MC, Meinhardt MW, Sommer WH, Heilig M, Zeier Z, Wahlestedt C. Dysregulation of the histone demethylase KDM6B in alcohol dependence is associated with epigenetic regulation of inflammatory signaling pathways. Addict Biol. 2021 01; 26(1):e12816. PMID: 31373129.
      View in: PubMed
    5. Khomtchouk BB, Nonner W. Gaussian-Distributed Codon Frequencies of Genomes. G3 (Bethesda). 2019 05 07; 9(5):1449-1456. PMID: 30808691.
      View in: PubMed
    6. Khomtchouk BB, Vand KA, Koehler WC, Tran DT, Middlebrook K, Sudhakaran S, Nelson CS, Gozani O, Assimes TL. HeartBioPortal. Circ Genom Precis Med. 2019 04; 12(4):e002426. PMID: 31294639.
      View in: PubMed
    7. Khomtchouk BB, Weitz E, Karp PD, Wahlestedt C. How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications. Brief Bioinform. 2018 05 01; 19(3):537-543. PMID: 28040748.
      View in: PubMed
    8. Khomtchouk BB, Weitz E, Karp PD, Wahlestedt C. How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications. Brief Bioinform. 2017 09 01; 18(5):905. PMID: 28334156.
      View in: PubMed
    9. Khomtchouk BB, Hennessy JR, Wahlestedt C. shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics. PLoS One. 2017; 12(5):e0176334. PMID: 28493881.
      View in: PubMed
    10. Gidlöf O, Johnstone AL, Bader K, Khomtchouk BB, O'Reilly JJ, Celik S, Van Booven DJ, Wahlestedt C, Metzler B, Erlinge D. Ischemic Preconditioning Confers Epigenetic Repression of Mtor and Induction of Autophagy Through G9a-Dependent H3K9 Dimethylation. J Am Heart Assoc. 2016 12 22; 5(12). PMID: 28007739.
      View in: PubMed
    11. Khomtchouk BB, Hennessy JR, Wahlestedt C. MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps. BMC Bioinformatics. 2016 Sep 22; 17(1):390. PMID: 27659774.
      View in: PubMed
    12. Barbier E, Johnstone AL, Khomtchouk BB, Tapocik JD, Pitcairn C, Rehman F, Augier E, Borich A, Schank JR, Rienas CA, Van Booven DJ, Sun H, Nätt D, Wahlestedt C, Heilig M. Dependence-induced increase of alcohol self-administration and compulsive drinking mediated by the histone methyltransferase PRDM2. Mol Psychiatry. 2017 Dec; 22(12):1746-1758. PMID: 27573876.
      View in: PubMed
    13. Khomtchouk BB, Van Booven DJ, Wahlestedt C. HeatmapGenerator: high performance RNAseq and microarray visualization software suite to examine differential gene expression levels using an R and C++ hybrid computational pipeline. Source Code Biol Med. 2014; 9(1):30. PMID: 25550709.
      View in: PubMed
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