Benoit Roux to Thermodynamics
This is a "connection" page, showing publications Benoit Roux has written about Thermodynamics.
Connection Strength
0.947
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Transition path theory analysis of c-Src kinase activation. Proc Natl Acad Sci U S A. 2016 08 16; 113(33):9193-8.
Score: 0.115
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Ion binding sites and their representations by reduced models. J Phys Chem B. 2012 Jun 14; 116(23):6966-79.
Score: 0.086
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Assessing the accuracy of approximate treatments of ion hydration based on primitive quasichemical theory. J Chem Phys. 2010 Jun 21; 132(23):234101.
Score: 0.075
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Exploring the ion selectivity properties of a large number of simplified binding site models. Biophys J. 2010 Jun 16; 98(12):2877-85.
Score: 0.075
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The membrane potential and its representation by a constant electric field in computer simulations. Biophys J. 2008 Nov 01; 95(9):4205-16.
Score: 0.066
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Structure of gramicidin a in a lipid bilayer environment determined using molecular dynamics simulations and solid-state NMR data. J Am Chem Soc. 2003 Aug 13; 125(32):9868-77.
Score: 0.047
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What can be deduced about the structure of Shaker from available data? Novartis Found Symp. 2002; 245:84-101; discussion 101-8, 165-8.
Score: 0.042
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Energetics of ion conduction through the K+ channel. Nature. 2001 Nov 01; 414(6859):73-7.
Score: 0.041
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The cavity and pore helices in the KcsA K+ channel: electrostatic stabilization of monovalent cations. Science. 1999 Jul 02; 285(5424):100-2.
Score: 0.035
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Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules. Biophys J. 1998 Jul; 75(1):33-40.
Score: 0.033
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Influence of the membrane potential on the free energy of an intrinsic protein. Biophys J. 1997 Dec; 73(6):2980-9.
Score: 0.032
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Valence selectivity of the gramicidin channel: a molecular dynamics free energy perturbation study. Biophys J. 1996 Dec; 71(6):3177-85.
Score: 0.029
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Commentary: surface tension of biomembranes. Biophys J. 1996 Sep; 71(3):1346-7.
Score: 0.029
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Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel. Biophys J. 1996 Jul; 71(1):19-39.
Score: 0.029
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Ion transport in the gramicidin channel: molecular dynamics study of single and double occupancy. Biophys J. 1995 Mar; 68(3):876-92.
Score: 0.026
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Functional interactions in bacteriorhodopsin: a theoretical analysis of retinal hydrogen bonding with water. Biophys J. 1995 Jan; 68(1):25-39.
Score: 0.026
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A molecular dynamics study of gating in dioxolane-linked gramicidin A channels. Biophys J. 1994 Oct; 67(4):1370-86.
Score: 0.025
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Molecular dynamics simulations of the gramicidin channel. Annu Rev Biophys Biomol Struct. 1994; 23:731-61.
Score: 0.024
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Computer simulations of the flexibility of a series of synthetic cyclic peptide analogues. Biopolymers. 1993 Aug; 33(8):1249-70.
Score: 0.023
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Ion transport in a model gramicidin channel. Structure and thermodynamics. Biophys J. 1991 May; 59(5):961-81.
Score: 0.020
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The normal modes of the gramicidin-A dimer channel. Biophys J. 1988 Mar; 53(3):297-309.
Score: 0.016
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Lipid-mediated interactions between intrinsic membrane proteins: dependence on protein size and lipid composition. Biophys J. 2001 Jul; 81(1):276-84.
Score: 0.010
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Framework model for single proton conduction through gramicidin. Biophys J. 2001 Jan; 80(1):12-30.
Score: 0.010
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Anchoring of a monotopic membrane protein: the binding of prostaglandin H2 synthase-1 to the surface of a phospholipid bilayer. Eur Biophys J. 2000; 29(6):439-54.
Score: 0.009
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Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin. Biophys J. 1999 Apr; 76(4):1909-17.
Score: 0.009
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Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study. Biophys J. 1997 Dec; 73(6):3039-55.
Score: 0.008
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Thermodynamic stability of water molecules in the bacteriorhodopsin proton channel: a molecular dynamics free energy perturbation study. Biophys J. 1996 Aug; 71(2):670-81.
Score: 0.007