Loading...
The University of Chicago Header Logo
Keywords
Last Name
Institution

Justin Borevitz

TitleResearch Associate (Associate Professor)
InstitutionUniversity of Chicago
DepartmentEcology & Evolution
AddressChicago IL 60637
vCardDownload vCard

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    List All   |   Timeline
    1. Murray KD, Janes JK, Jones A, Bothwell HM, Andrew RL, Borevitz JO. Landscape drivers of genomic diversity and divergence in woodland Eucalyptus. Mol Ecol. 2019 Oct 24. PMID: 31647597.
      View in: PubMed
    2. Rungrat T, Almonte AA, Cheng R, Gollan PJ, Stuart T, Aro EM, Borevitz JO, Pogson B, Wilson PB. A Genome-Wide Association Study of Non-Photochemical Quenching in response to local seasonal climates in Arabidopsis thaliana. Plant Direct. 2019 May; 3(5):e00138. PMID: 31276082.
      View in: PubMed
    3. Srivastava A, Karpievitch YV, Eichten SR, Borevitz JO, Lister R. HOME: a histogram based machine learning approach for effective identification of differentially methylated regions. BMC Bioinformatics. 2019 May 16; 20(1):253. PMID: 31096906.
      View in: PubMed
    4. von Takach Dukai B, Jack C, Borevitz J, Lindenmayer DB, Banks SC. Pervasive admixture between eucalypt species has consequences for conservation and assisted migration. Evol Appl. 2019 Apr; 12(4):845-860. PMID: 30976314.
      View in: PubMed
    5. Wilson PB, Streich JC, Murray KD, Eichten SR, Cheng R, Aitken NC, Spokas K, Warthmann N, Gordon SP. Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate. Genetics. 2019 01; 211(1):317-331. PMID: 30446522.
      View in: PubMed
    6. Murray KD, Borevitz JO. Axe: rapid, competitive sequence read demultiplexing using a trie. Bioinformatics. 2018 11 15; 34(22):3924-3925. PMID: 29868827.
      View in: PubMed
    7. Taghavi Namin S, Esmaeilzadeh M, Najafi M, Brown TB, Borevitz JO. Deep phenotyping: deep learning for temporal phenotype/genotype classification. Plant Methods. 2018; 14:66. PMID: 30087695.
      View in: PubMed
    8. Almonte AA, Borevitz JO. Adaptation genomics: The angel is in the details. Plant Cell Environ. 2018 10; 41(10):2244-2246. PMID: 29777598.
      View in: PubMed
    9. Supple MA, Bragg JG, Broadhurst LM, Nicotra AB, Byrne M, Andrew RL, Widdup A, Aitken NC, Borevitz JO. Landscape genomic prediction for restoration of a Eucalyptus foundation species under climate change. Elife. 2018 04 24; 7. PMID: 29685183.
      View in: PubMed
    10. Murray KD, Webers C, Ong CS, Borevitz J, Warthmann N. kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity. PLoS Comput Biol. 2017 Sep; 13(9):e1005727. PMID: 28873405.
      View in: PubMed
    11. Crisp PA, Ganguly DR, Smith AB, Murray KD, Estavillo GM, Searle I, Ford E, Bogdanovic O, Lister R, Borevitz JO, Eichten SR, Pogson BJ. Rapid Recovery Gene Downregulation during Excess-Light Stress and Recovery in Arabidopsis. Plant Cell. 2017 Aug; 29(8):1836-1863. PMID: 28705956.
      View in: PubMed
    12. Ahrens CW, Supple MA, Aitken NC, Cantrill DJ, Borevitz JO, James EA. Genomic diversity guides conservation strategies among rare terrestrial orchid species when taxonomy remains uncertain. Ann Bot. 2017 06 01; 119(8):1267-1277. PMID: 28334284.
      View in: PubMed
    13. Prunier R, Akman M, Kremer CT, Aitken N, Chuah A, Borevitz J, Holsinger KE. Isolation by distance and isolation by environment contribute to population differentiation in Protea repens (Proteaceae L.), a widespread South African species. Am J Bot. 2017 May; 104(5):674-684. PMID: 28500229.
      View in: PubMed
    14. Cheng R, Doerge RW, Borevitz J. Novel Resampling Improves Statistical Power for Multiple-Trait QTL Mapping. G3 (Bethesda). 2017 03 10; 7(3):813-822. PMID: 28064191.
      View in: PubMed
    15. Stuart T, Eichten SR, Cahn J, Karpievitch YV, Borevitz JO, Lister R. Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation. Elife. 2016 12 02; 5. PMID: 27911260.
      View in: PubMed
    16. Kantarski T, Larson S, Zhang X, DeHaan L, Borevitz J, Anderson J, Poland J. Development of the first consensus genetic map of intermediate wheatgrass (Thinopyrum intermedium) using genotyping-by-sequencing. Theor Appl Genet. 2017 Jan; 130(1):137-150. PMID: 27738715.
      View in: PubMed
    17. Eichten SR, Stuart T, Srivastava A, Lister R, Borevitz JO. DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity. Genome Res. 2016 11; 26(11):1520-1531. PMID: 27613611.
      View in: PubMed
    18. Rungrat T, Awlia M, Brown T, Cheng R, Sirault X, Fajkus J, Trtilek M, Furbank B, Badger M, Tester M, Pogson BJ, Borevitz JO, Wilson P. Using Phenomic Analysis of Photosynthetic Function for Abiotic Stress Response Gene Discovery. Arabidopsis Book. 2016; 14:e0185. PMID: 27695390.
      View in: PubMed
    19. Nicotra AB, Chong C, Bragg JG, Ong CR, Aitken NC, Chuah A, Lepschi B, Borevitz JO. Population and phylogenomic decomposition via genotyping-by-sequencing in Australian Pelargonium. Mol Ecol. 2016 May; 25(9):2000-14. PMID: 26864117.
      View in: PubMed
    20. Crisp PA, Ganguly D, Eichten SR, Borevitz JO, Pogson BJ. Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics. Sci Adv. 2016 Feb; 2(2):e1501340. PMID: 26989783.
      View in: PubMed
    21. Morris GP, Hu Z, Grabowski PP, Borevitz JO, de Graaff MA, Miller RM, Jastrow JD. Genotypic diversity effects on biomass production in native perennial bioenergy cropping systems. Glob Change Biol Bioenergy. 2016 Sep; 8(5):1000-1014. PMID: 27668013.
      View in: PubMed
    22. Bragg JG, Supple MA, Andrew RL, Borevitz JO. Genomic variation across landscapes: insights and applications. New Phytol. 2015 Sep; 207(4):953-67. PMID: 25904408.
      View in: PubMed
    23. Noutsos C, Borevitz JO, Hodges SA. Gene flow between nascent species: geographic, genotypic and phenotypic differentiation within and between Aquilegia formosa and A. pubescens. Mol Ecol. 2014 11; 23(22):5589-98. PMID: 25314338.
      View in: PubMed
    24. Wilson AW, Wickett NJ, Grabowski P, Fant J, Borevitz J, Mueller GM. Examining the efficacy of a genotyping-by-sequencing technique for population genetic analysis of the mushroom Laccaria bicolor and evaluating whether a reference genome is necessary to assess homology. Mycologia. 2015 Jan-Feb; 107(1):217-26. PMID: 25361831.
      View in: PubMed
    25. Cazzonelli CI, Nisar N, Roberts AC, Murray KD, Borevitz JO, Pogson BJ. A chromatin modifying enzyme, SDG8, is involved in morphological, gene expression, and epigenetic responses to mechanical stimulation. Front Plant Sci. 2014; 5:533. PMID: 25374573.
      View in: PubMed
    26. Grabowski PP, Morris GP, Casler MD, Borevitz JO. Population genomic variation reveals roles of history, adaptation and ploidy in switchgrass. Mol Ecol. 2014 Aug; 23(16):4059-73. PMID: 24962137.
      View in: PubMed
    27. Brown TB, Cheng R, Sirault XR, Rungrat T, Murray KD, Trtilek M, Furbank RT, Badger M, Pogson BJ, Borevitz JO. TraitCapture: genomic and environment modelling of plant phenomic data. Curr Opin Plant Biol. 2014 Apr; 18:73-9. PMID: 24646691.
      View in: PubMed
    28. Fitz Gerald JN, Carlson AL, Smith E, Maloof JN, Weigel D, Chory J, Borevitz JO, Swanson RJ. New Arabidopsis advanced intercross recombinant inbred lines reveal female control of nonrandom mating. Plant Physiol. 2014 May; 165(1):175-85. PMID: 24623850.
      View in: PubMed
    29. Li Y, Cheng R, Spokas KA, Palmer AA, Borevitz JO. Genetic variation for life history sensitivity to seasonal warming in Arabidopsis thaliana. Genetics. 2014 Feb; 196(2):569-77. PMID: 24281156.
      View in: PubMed
    30. Donoghue MT, Fort A, Clifton R, Zhang X, McKeown PC, Voigt-Zielinksi ML, Borevitz JO, Spillane C. C(m)CGG methylation-independent parent-of-origin effects on genome-wide transcript levels in isogenic reciprocal F1 triploid plants. DNA Res. 2014; 21(2):141-51. PMID: 24212467.
      View in: PubMed
    31. Cheng R, Borevitz J, Doerge RW. Selecting informative traits for multivariate quantitative trait locus mapping helps to gain optimal power. Genetics. 2013 Nov; 195(3):683-91. PMID: 23979571.
      View in: PubMed
    32. Eichten S, Borevitz J. Epigenomics: Methylation's mark on inheritance. Nature. 2013 Mar 14; 495(7440):181-2. PMID: 23467093.
      View in: PubMed
    33. He F, Zhang X, Hu J, Turck F, Dong X, Goebel U, Borevitz J, de Meaux J. Genome-wide analysis of cis-regulatory divergence between species in the Arabidopsis genus. Mol Biol Evol. 2012 Nov; 29(11):3385-95. PMID: 22641789.
      View in: PubMed
    34. Horton MW, Hancock AM, Huang YS, Toomajian C, Atwell S, Auton A, Muliyati NW, Platt A, Sperone FG, Vilhjálmsson BJ, Nordborg M, Borevitz JO, Bergelson J. Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel. Nat Genet. 2012 Jan 08; 44(2):212-6. PMID: 22231484.
      View in: PubMed
    35. Zhang X, Hause RJ, Borevitz JO. Natural Genetic Variation for Growth and Development Revealed by High-Throughput Phenotyping in Arabidopsis thaliana. G3 (Bethesda). 2012 Jan; 2(1):29-34. PMID: 22384379.
      View in: PubMed
    36. Brown T, Zimmermann C, Panneton W, Noah N, Borevitz J. High-resolution, time-lapse imaging for ecosystem-scale phenotyping in the field. Methods Mol Biol. 2012; 918:71-96. PMID: 22893287.
      View in: PubMed
    37. He F, Zhang X, Hu JY, Turck F, Dong X, Goebel U, Borevitz JO, de Meaux J. Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus. Mol Biol Evol. 2012 Mar; 29(3):1081-91. PMID: 22086904.
      View in: PubMed
    38. Morris GP, Grabowski PP, Borevitz JO. Genomic diversity in switchgrass (Panicum virgatum): from the continental scale to a dune landscape. Mol Ecol. 2011 Dec; 20(23):4938-52. PMID: 22060816.
      View in: PubMed
    39. Brachi B, Morris GP, Borevitz JO. Genome-wide association studies in plants: the missing heritability is in the field. Genome Biol. 2011 Oct 28; 12(10):232. PMID: 22035733.
      View in: PubMed
    40. Anastasio AE, Platt A, Horton M, Grotewold E, Scholl R, Borevitz JO, Nordborg M, Bergelson J. Source verification of mis-identified Arabidopsis thaliana accessions. Plant J. 2011 Aug; 67(3):554-66. PMID: 21481029.
      View in: PubMed
    41. Huang YS, Horton M, Vilhjálmsson BJ, Seren U, Meng D, Meyer C, Ali Amer M, Borevitz JO, Bergelson J, Nordborg M. Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies. Database (Oxford). 2011; 2011:bar014. PMID: 21609965.
      View in: PubMed
    42. Zhang X, Cal AJ, Borevitz JO. Genetic architecture of regulatory variation in Arabidopsis thaliana. Genome Res. 2011 May; 21(5):725-33. PMID: 21467266.
      View in: PubMed
    43. Li Y, Huang Y, Bergelson J, Nordborg M, Borevitz JO. Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana. Proc Natl Acad Sci U S A. 2010 Dec 07; 107(49):21199-204. PMID: 21078970.
      View in: PubMed
    44. Baxter I, Brazelton JN, Yu D, Huang YS, Lahner B, Yakubova E, Li Y, Bergelson J, Borevitz JO, Nordborg M, Vitek O, Salt DE. A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1. PLoS Genet. 2010 Nov 11; 6(11):e1001193. PMID: 21085628.
      View in: PubMed
    45. Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG, Brown JW, Cerdán PD, Borevitz JO, Mas P, Ceriani MF, Kornblihtt AR, Yanovsky MJ. A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 2010 Nov 04; 468(7320):112-6. PMID: 20962777.
      View in: PubMed
    46. Glover JD, Reganold JP, Bell LW, Borevitz J, Brummer EC, Buckler ES, Cox CM, Cox TS, Crews TE, Culman SW, DeHaan LR, Eriksson D, Gill BS, Holland J, Hu F, Hulke BS, Ibrahim AM, Jackson W, Jones SS, Murray SC, Paterson AH, Ploschuk E, Sacks EJ, Snapp S, Tao D, Van Tassel DL, Wade LJ, Wyse DL, Xu Y. Agriculture. Increased food and ecosystem security via perennial grains. Science. 2010 Jun 25; 328(5986):1638-9. PMID: 20576874.
      View in: PubMed
    47. Todesco M, Balasubramanian S, Hu TT, Traw MB, Horton M, Epple P, Kuhns C, Sureshkumar S, Schwartz C, Lanz C, Laitinen RA, Huang Y, Chory J, Lipka V, Borevitz JO, Dangl JL, Bergelson J, Nordborg M, Weigel D. Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana. Nature. 2010 Jun 03; 465(7298):632-6. PMID: 20520716.
      View in: PubMed
    48. Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 2010 Jun 03; 465(7298):627-31. PMID: 20336072.
      View in: PubMed
    49. Voelckel C, Borevitz JO, Kramer EM, Hodges SA. Within and between whorls: comparative transcriptional profiling of Aquilegia and Arabidopsis. PLoS One. 2010 Mar 23; 5(3):e9735. PMID: 20352114.
      View in: PubMed
    50. Platt A, Horton M, Huang YS, Li Y, Anastasio AE, Mulyati NW, Agren J, Bossdorf O, Byers D, Donohue K, Dunning M, Holub EB, Hudson A, Le Corre V, Loudet O, Roux F, Warthmann N, Weigel D, Rivero L, Scholl R, Nordborg M, Bergelson J, Borevitz JO. The scale of population structure in Arabidopsis thaliana. PLoS Genet. 2010 Feb 12; 6(2):e1000843. PMID: 20169178.
      View in: PubMed
    51. Schwartz C, Balasubramanian S, Warthmann N, Michael TP, Lempe J, Sureshkumar S, Kobayashi Y, Maloof JN, Borevitz JO, Chory J, Weigel D. Cis-regulatory changes at FLOWERING LOCUS T mediate natural variation in flowering responses of Arabidopsis thaliana. Genetics. 2009 Oct; 183(2):723-32, 1SI-7SI. PMID: 19652183.
      View in: PubMed
    52. Zhang X, Borevitz JO. Global analysis of allele-specific expression in Arabidopsis thaliana. Genetics. 2009 Aug; 182(4):943-54. PMID: 19474198.
      View in: PubMed
    53. Baxter I, Hosmani PS, Rus A, Lahner B, Borevitz JO, Muthukumar B, Mickelbart MV, Schreiber L, Franke RB, Salt DE. Root suberin forms an extracellular barrier that affects water relations and mineral nutrition in Arabidopsis. PLoS Genet. 2009 May; 5(5):e1000492. PMID: 19461889.
      View in: PubMed
    54. Williams R, Lim JE, Harr B, Wing C, Walters R, Distler MG, Teschke M, Wu C, Wiltshire T, Su AI, Sokoloff G, Tarantino LM, Borevitz JO, Palmer AA. A common and unstable copy number variant is associated with differences in Glo1 expression and anxiety-like behavior. PLoS One. 2009; 4(3):e4649. PMID: 19266052.
      View in: PubMed
    55. Hazen SP, Naef F, Quisel T, Gendron JM, Chen H, Ecker JR, Borevitz JO, Kay SA. Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays. Genome Biol. 2009 Feb 11; 10(2):R17. PMID: 19210792.
      View in: PubMed
    56. Balasubramanian S, Schwartz C, Singh A, Warthmann N, Kim MC, Maloof JN, Loudet O, Trainer GT, Dabi T, Borevitz JO, Chory J, Weigel D. QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS One. 2009; 4(2):e4318. PMID: 19183806.
      View in: PubMed
    57. Zhang X, Byrnes JK, Gal TS, Li WH, Borevitz JO. Whole genome transcriptome polymorphisms in Arabidopsis thaliana. Genome Biol. 2008; 9(11):R165. PMID: 19025653.
      View in: PubMed
    58. Bender J, Benfey P, Bergmann D, Borevitz J, Coruzzi G, Dangl J, Dean C, Ecker J, Estelle M, Glazebrook J, Grant S, Guerinot ML, Gutierrez R, Long J, Nordborg M, Poethig S, Raikhel N, Schmitt J, Schnittger A, Vidal M. 2020 vision for biology: the role of plants in addressing grand challenges in biology. Mol Plant. 2008 Jul; 1(4):561-3. PMID: 19825561.
      View in: PubMed
    59. Emerson JJ, Cardoso-Moreira M, Borevitz JO, Long M. Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster. Science. 2008 Jun 20; 320(5883):1629-31. PMID: 18535209.
      View in: PubMed
    60. Zhang X, Shiu SH, Shiu S, Cal A, Borevitz JO. Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays. PLoS Genet. 2008 Mar 21; 4(3):e1000032. PMID: 18369451.
      View in: PubMed
    61. Borevitz J, Neff M. Phenotypic analysis of Arabidopsis mutants: hypocotyl length. CSH Protoc. 2008 Mar 01; 2008:pdb.prot4962. PMID: 21356787.
      View in: PubMed
    62. Filiault DL, Wessinger CA, Dinneny JR, Lutes J, Borevitz JO, Weigel D, Chory J, Maloof JN. Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light. Proc Natl Acad Sci U S A. 2008 Feb 26; 105(8):3157-62. PMID: 18287016.
      View in: PubMed
    63. Jones-Rhoades MW, Borevitz JO, Preuss D. Genome-wide expression profiling of the Arabidopsis female gametophyte identifies families of small, secreted proteins. PLoS Genet. 2007 Oct; 3(10):1848-61. PMID: 17937500.
      View in: PubMed
    64. Borevitz JO, Hazen SP, Michael TP, Morris GP, Baxter IR, Hu TT, Chen H, Werner JD, Nordborg M, Salt DE, Kay SA, Chory J, Weigel D, Jones JD, Ecker JR. Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana. Proc Natl Acad Sci U S A. 2007 Jul 17; 104(29):12057-62. PMID: 17626786.
      View in: PubMed
    65. Hanada K, Zhang X, Borevitz JO, Li WH, Shiu SH. A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection. Genome Res. 2007 May; 17(5):632-40. PMID: 17395691.
      View in: PubMed
    66. Smemo S, Borevitz JO. Redundancy in genotyping arrays. PLoS One. 2007 Mar 14; 2(3):e287. PMID: 17356697.
      View in: PubMed
    67. Zhang X, Richards EJ, Borevitz JO. Genetic and epigenetic dissection of cis regulatory variation. Curr Opin Plant Biol. 2007 Apr; 10(2):142-8. PMID: 17300985.
      View in: PubMed
    68. Li Y, Roycewicz P, Smith E, Borevitz JO. Genetics of local adaptation in the laboratory: flowering time quantitative trait loci under geographic and seasonal conditions in Arabidopsis. PLoS One. 2006 Dec 27; 1:e105. PMID: 17205109.
      View in: PubMed
    69. Shiu SH, Borevitz JO. The next generation of microarray research: applications in evolutionary and ecological genomics. Heredity (Edinb). 2008 Feb; 100(2):141-9. PMID: 17091126.
      View in: PubMed
    70. Gilad Y, Borevitz J. Using DNA microarrays to study natural variation. Curr Opin Genet Dev. 2006 Dec; 16(6):553-8. PMID: 17008090.
      View in: PubMed
    71. Baxter IR, Borevitz JO. Mapping a plant's chemical vocabulary. Nat Genet. 2006 Jul; 38(7):737-8. PMID: 16804534.
      View in: PubMed
    72. Kidgell C, Volkman SK, Daily J, Borevitz JO, Plouffe D, Zhou Y, Johnson JR, Le Roch K, Sarr O, Ndir O, Mboup S, Batalov S, Wirth DF, Winzeler EA. A systematic map of genetic variation in Plasmodium falciparum. PLoS Pathog. 2006 Jun; 2(6):e57. PMID: 16789840.
      View in: PubMed
    73. Jiang R, Marjoram P, Borevitz JO, Tavaré S. Inferring population parameters from single-feature polymorphism data. Genetics. 2006 Aug; 173(4):2257-67. PMID: 16702439.
      View in: PubMed
    74. Kim SK, Borevitz J. Mining the HapMap to dissect complex traits. Genome Biol. 2006; 7(3):310. PMID: 16569264.
      View in: PubMed
    75. Kim S, Zhao K, Jiang R, Molitor J, Borevitz JO, Nordborg M, Marjoram P. Association mapping with single-feature polymorphisms. Genetics. 2006 Jun; 173(2):1125-33. PMID: 16510789.
      View in: PubMed
    76. Borevitz J. Genotyping and mapping with high-density oligonucleotide arrays. Methods Mol Biol. 2006; 323:137-45. PMID: 16739574.
      View in: PubMed
    77. Hazen SP, Schultz TF, Pruneda-Paz JL, Borevitz JO, Ecker JR, Kay SA. LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms. Proc Natl Acad Sci U S A. 2005 Jul 19; 102(29):10387-92. PMID: 16006522.
      View in: PubMed
    78. Werner JD, Borevitz JO, Uhlenhaut NH, Ecker JR, Chory J, Weigel D. FRIGIDA-independent variation in flowering time of natural Arabidopsis thaliana accessions. Genetics. 2005 Jul; 170(3):1197-207. PMID: 15911588.
      View in: PubMed
    79. Hazen SP, Borevitz JO, Harmon FG, Pruneda-Paz JL, Schultz TF, Yanovsky MJ, Liljegren SJ, Ecker JR, Kay SA. Rapid array mapping of circadian clock and developmental mutations in Arabidopsis. Plant Physiol. 2005 Jun; 138(2):990-7. PMID: 15908595.
      View in: PubMed
    80. Rostoks N, Borevitz JO, Hedley PE, Russell J, Mudie S, Morris J, Cardle L, Marshall DF, Waugh R. Single-feature polymorphism discovery in the barley transcriptome. Genome Biol. 2005; 6(6):R54. PMID: 15960806.
      View in: PubMed
    81. Werner JD, Borevitz JO, Warthmann N, Trainer GT, Ecker JR, Chory J, Weigel D. Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural flowering-time variation. Proc Natl Acad Sci U S A. 2005 Feb 15; 102(7):2460-5. PMID: 15695584.
      View in: PubMed
    82. Wolyn DJ, Borevitz JO, Loudet O, Schwartz C, Maloof J, Ecker JR, Berry CC, Chory J. Light-response quantitative trait loci identified with composite interval and eXtreme array mapping in Arabidopsis thaliana. Genetics. 2004 Jun; 167(2):907-17. PMID: 15238539.
      View in: PubMed
    83. Borevitz JO, Chory J. Genomics tools for QTL analysis and gene discovery. Curr Opin Plant Biol. 2004 Apr; 7(2):132-6. PMID: 15003212.
      View in: PubMed
    84. Xia Y, Suzuki H, Borevitz J, Blount J, Guo Z, Patel K, Dixon RA, Lamb C. An extracellular aspartic protease functions in Arabidopsis disease resistance signaling. EMBO J. 2004 Feb 25; 23(4):980-8. PMID: 14765119.
      View in: PubMed
    85. Borevitz JO, Ecker JR. Plant genomics: the third wave. Annu Rev Genomics Hum Genet. 2004; 5:443-77. PMID: 15485356.
      View in: PubMed
    86. Borevitz JO, Nordborg M. The impact of genomics on the study of natural variation in Arabidopsis. Plant Physiol. 2003 Jun; 132(2):718-25. PMID: 12805600.
      View in: PubMed
    87. Borevitz JO, Liang D, Plouffe D, Chang HS, Zhu T, Weigel D, Berry CC, Winzeler E, Chory J. Large-scale identification of single-feature polymorphisms in complex genomes. Genome Res. 2003 Mar; 13(3):513-23. PMID: 12618383.
      View in: PubMed
    88. Borevitz JO, Maloof JN, Lutes J, Dabi T, Redfern JL, Trainer GT, Werner JD, Asami T, Berry CC, Weigel D, Chory J. Quantitative trait loci controlling light and hormone response in two accessions of Arabidopsis thaliana. Genetics. 2002 Feb; 160(2):683-96. PMID: 11861571.
      View in: PubMed
    89. Nordborg M, Borevitz JO, Bergelson J, Berry CC, Chory J, Hagenblad J, Kreitman M, Maloof JN, Noyes T, Oefner PJ, Stahl EA, Weigel D. The extent of linkage disequilibrium in Arabidopsis thaliana. Nat Genet. 2002 Feb; 30(2):190-3. PMID: 11780140.
      View in: PubMed
    90. Maloof JN, Borevitz JO, Dabi T, Lutes J, Nehring RB, Redfern JL, Trainer GT, Wilson JM, Asami T, Berry CC, Weigel D, Chory J. Natural variation in light sensitivity of Arabidopsis. Nat Genet. 2001 Dec; 29(4):441-6. PMID: 11726931.
      View in: PubMed
    91. Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C. Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell. 2000 Dec; 12(12):2383-2394. PMID: 11148285.
      View in: PubMed
    92. Maloof JN, Borevitz JO, Weigel D, Chory J. Natural variation in phytochrome signaling. Semin Cell Dev Biol. 2000 Dec; 11(6):523-30. PMID: 11145882.
      View in: PubMed
    93. Weigel D, Ahn JH, Blázquez MA, Borevitz JO, Christensen SK, Fankhauser C, Ferrándiz C, Kardailsky I, Malancharuvil EJ, Neff MM, Nguyen JT, Sato S, Wang ZY, Xia Y, Dixon RA, Harrison MJ, Lamb CJ, Yanofsky MF, Chory J. Activation tagging in Arabidopsis. Plant Physiol. 2000 Apr; 122(4):1003-13. PMID: 10759496.
      View in: PubMed
    Borevitz's Networks
    Click the "See All" links for more information and interactive visualizations!
    Concepts Expand Description
    See all (276) concept(s)
    _
    Co-Authors Expand Description
    See all (7) people
    _
    Similar People Expand Description
    See all (60) people
    _
    Same Department Expand Description
    Search Department
    Physical Neighbors Expand Description
    _