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Lixing Yang to Humans

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This is a "connection" page, showing publications Lixing Yang has written about Humans.
Lixing Yang
Connection Strength
0.697
Humans
  1. Transcription and DNA replication collisions lead to large tandem duplications and expose targetable therapeutic vulnerabilities in cancer. Nat Cancer. 2024 Dec; 5(12):1885-1901.
    View in: PubMed
    Score: 0.029
  2. HYENA detects oncogenes activated by distal enhancers in cancer. Nucleic Acids Res. 2024 Sep 09; 52(16):e77.
    View in: PubMed
    Score: 0.028
  3. Somatic structural variation signatures in pediatric brain tumors. Cell Rep. 2023 10 31; 42(10):113276.
    View in: PubMed
    Score: 0.027
  4. SFyNCS detects oncogenic fusions involving non-coding sequences in cancer. Nucleic Acids Res. 2023 10 13; 51(18):e96.
    View in: PubMed
    Score: 0.027
  5. Starfish infers signatures of complex genomic rearrangements across human cancers. Nat Cancer. 2022 10; 3(10):1247-1259.
    View in: PubMed
    Score: 0.024
  6. Meerkat: An Algorithm to Reliably Identify Structural Variations and Predict Their Forming Mechanisms. Methods Mol Biol. 2022; 2493:107-135.
    View in: PubMed
    Score: 0.024
  7. A Practical Guide for Structural Variation Detection in the Human Genome. Curr Protoc Hum Genet. 2020 09; 107(1):e103.
    View in: PubMed
    Score: 0.021
  8. Butler enables rapid cloud-based analysis of thousands of human genomes. Nat Biotechnol. 2020 03; 38(3):288-292.
    View in: PubMed
    Score: 0.021
  9. Pan-cancer analysis of whole genomes. Nature. 2020 02; 578(7793):82-93.
    View in: PubMed
    Score: 0.021
  10. An enhanced genetic model of colorectal cancer progression history. Genome Biol. 2019 08 15; 20(1):168.
    View in: PubMed
    Score: 0.020
  11. Analyzing Somatic Genome Rearrangements in Human Cancers by Using Whole-Exome Sequencing. Am J Hum Genet. 2016 05 05; 98(5):843-856.
    View in: PubMed
    Score: 0.016
  12. The Molecular Taxonomy of Primary Prostate Cancer. Cell. 2015 Nov 05; 163(4):1011-25.
    View in: PubMed
    Score: 0.015
  13. Genomic Classification of Cutaneous Melanoma. Cell. 2015 Jun 18; 161(7):1681-96.
    View in: PubMed
    Score: 0.015
  14. Comprehensive genomic characterization of head and neck squamous cell carcinomas. Nature. 2015 Jan 29; 517(7536):576-82.
    View in: PubMed
    Score: 0.015
  15. Integrated genomic characterization of papillary thyroid carcinoma. Cell. 2014 Oct 23; 159(3):676-90.
    View in: PubMed
    Score: 0.014
  16. Comprehensive molecular characterization of gastric adenocarcinoma. Nature. 2014 Sep 11; 513(7517):202-9.
    View in: PubMed
    Score: 0.014
  17. Comprehensive molecular profiling of lung adenocarcinoma. Nature. 2014 Jul 31; 511(7511):543-50.
    View in: PubMed
    Score: 0.014
  18. Comprehensive molecular characterization of urothelial bladder carcinoma. Nature. 2014 Mar 20; 507(7492):315-22.
    View in: PubMed
    Score: 0.014
  19. Diverse mechanisms of somatic structural variations in human cancer genomes. Cell. 2013 May 09; 153(4):919-29.
    View in: PubMed
    Score: 0.013
  20. Comprehensive genomic characterization of squamous cell lung cancers. Nature. 2012 Sep 27; 489(7417):519-25.
    View in: PubMed
    Score: 0.012
  21. Comprehensive molecular characterization of human colon and rectal cancer. Nature. 2012 Jul 18; 487(7407):330-7.
    View in: PubMed
    Score: 0.012
  22. Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples. Nat Commun. 2020 09 21; 11(1):4748.
    View in: PubMed
    Score: 0.011
  23. Genomic footprints of activated telomere maintenance mechanisms in cancer. Nat Commun. 2020 02 05; 11(1):733.
    View in: PubMed
    Score: 0.010
  24. Combined burden and functional impact tests for cancer driver discovery using DriverPower. Nat Commun. 2020 02 05; 11(1):734.
    View in: PubMed
    Score: 0.010
  25. Divergent mutational processes distinguish hypoxic and normoxic tumours. Nat Commun. 2020 02 05; 11(1):737.
    View in: PubMed
    Score: 0.010
  26. High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations. Nat Commun. 2020 02 05; 11(1):736.
    View in: PubMed
    Score: 0.010
  27. Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig. Nat Commun. 2020 02 05; 11(1):731.
    View in: PubMed
    Score: 0.010
  28. Integrative pathway enrichment analysis of multivariate omics data. Nat Commun. 2020 02 05; 11(1):735.
    View in: PubMed
    Score: 0.010
  29. A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns. Nat Commun. 2020 02 05; 11(1):728.
    View in: PubMed
    Score: 0.010
  30. Pathway and network analysis of more than 2500 whole cancer genomes. Nat Commun. 2020 02 05; 11(1):729.
    View in: PubMed
    Score: 0.010
  31. Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis. Commun Biol. 2020 02 05; 3(1):56.
    View in: PubMed
    Score: 0.010
  32. Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition. Nat Genet. 2020 03; 52(3):306-319.
    View in: PubMed
    Score: 0.010
  33. Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer. Nat Genet. 2020 03; 52(3):294-305.
    View in: PubMed
    Score: 0.010
  34. The landscape of viral associations in human cancers. Nat Genet. 2020 03; 52(3):320-330.
    View in: PubMed
    Score: 0.010
  35. Patterns of somatic structural variation in human cancer genomes. Nature. 2020 02; 578(7793):112-121.
    View in: PubMed
    Score: 0.010
  36. The repertoire of mutational signatures in human cancer. Nature. 2020 02; 578(7793):94-101.
    View in: PubMed
    Score: 0.010
  37. Integrated genomic and molecular characterization of cervical cancer. Nature. 2017 03 16; 543(7645):378-384.
    View in: PubMed
    Score: 0.008
  38. Integrated genomic characterization of oesophageal carcinoma. Nature. 2017 01 12; 541(7636):169-175.
    View in: PubMed
    Score: 0.008
  39. Synthetic Lethal Targeting of CDK12-Deficient Prostate Cancer with PARP Inhibitors. Clin Cancer Res. 2024 Dec 02; 30(23):5445-5458.
    View in: PubMed
    Score: 0.007
  40. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet. 2013 Oct; 45(10):1113-20.
    View in: PubMed
    Score: 0.007
  41. A functional genomic approach to actionable gene fusions for precision oncology. Sci Adv. 2022 02 11; 8(6):eabm2382.
    View in: PubMed
    Score: 0.006
  42. Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway. Cell Rep. 2021 02 02; 34(5):108707.
    View in: PubMed
    Score: 0.006
  43. Sex differences in oncogenic mutational processes. Nat Commun. 2020 08 28; 11(1):4330.
    View in: PubMed
    Score: 0.005
  44. Dysregulation of cancer genes by recurrent intergenic fusions. Genome Biol. 2020 07 06; 21(1):166.
    View in: PubMed
    Score: 0.005
  45. The evolutionary history of 2,658 cancers. Nature. 2020 02; 578(7793):122-128.
    View in: PubMed
    Score: 0.005
  46. Inferring structural variant cancer cell fraction. Nat Commun. 2020 02 05; 11(1):730.
    View in: PubMed
    Score: 0.005
  47. Comprehensive molecular characterization of mitochondrial genomes in human cancers. Nat Genet. 2020 03; 52(3):342-352.
    View in: PubMed
    Score: 0.005
  48. Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing. Nat Genet. 2020 03; 52(3):331-341.
    View in: PubMed
    Score: 0.005
  49. Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature. 2020 02; 578(7793):102-111.
    View in: PubMed
    Score: 0.005
  50. Genomic basis for RNA alterations in cancer. Nature. 2020 02; 578(7793):129-136.
    View in: PubMed
    Score: 0.005
  51. Global impact of somatic structural variation on the DNA methylome of human cancers. Genome Biol. 2019 10 15; 20(1):209.
    View in: PubMed
    Score: 0.005
  52. A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases. Cell Rep. 2018 07 10; 24(2):515-527.
    View in: PubMed
    Score: 0.005
  53. The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma. Cell Rep. 2018 04 03; 23(1):313-326.e5.
    View in: PubMed
    Score: 0.005
  54. Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma. Cancer Cell. 2017 08 14; 32(2):204-220.e15.
    View in: PubMed
    Score: 0.004
  55. A Pan-Cancer Proteogenomic Atlas of PI3K/AKT/mTOR Pathway Alterations. Cancer Cell. 2017 06 12; 31(6):820-832.e3.
    View in: PubMed
    Score: 0.004
  56. Engineering and Functional Characterization of Fusion Genes Identifies Novel Oncogenic Drivers of Cancer. Cancer Res. 2017 07 01; 77(13):3502-3512.
    View in: PubMed
    Score: 0.004
  57. Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma. Cell Rep. 2016 Mar 15; 14(10):2476-89.
    View in: PubMed
    Score: 0.004
  58. Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma. Cell. 2016 Jan 28; 164(3):550-63.
    View in: PubMed
    Score: 0.004
  59. Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas. N Engl J Med. 2015 Jun 25; 372(26):2481-98.
    View in: PubMed
    Score: 0.004
  60. Cell lineage analysis in human brain using endogenous retroelements. Neuron. 2015 Jan 07; 85(1):49-59.
    View in: PubMed
    Score: 0.004
  61. Characterization of HPV and host genome interactions in primary head and neck cancers. Proc Natl Acad Sci U S A. 2014 Oct 28; 111(43):15544-9.
    View in: PubMed
    Score: 0.004
  62. The somatic genomic landscape of chromophobe renal cell carcinoma. Cancer Cell. 2014 Sep 08; 26(3):319-330.
    View in: PubMed
    Score: 0.004
  63. Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin. Cell. 2014 Aug 14; 158(4):929-944.
    View in: PubMed
    Score: 0.004
  64. The somatic genomic landscape of glioblastoma. Cell. 2013 Oct 10; 155(2):462-77.
    View in: PubMed
    Score: 0.003
  65. Integrated genomic characterization of endometrial carcinoma. Nature. 2013 May 02; 497(7447):67-73.
    View in: PubMed
    Score: 0.003
  66. Landscape of somatic retrotransposition in human cancers. Science. 2012 Aug 24; 337(6097):967-71.
    View in: PubMed
    Score: 0.003
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.