SeppeKuehnSeppe Kuehn41.7886000000000087.598699999999993932Kuehn, SeppeAssistant Professorplugins:FeaturedVideosFeatured Videosplugins:TwitterTwitterprns:emailEncryptedemail addressFaculty Rankprns:fullNamefull nameprns:hasAuthorListauthor listprns:hasFacultyRankhas faculty rankprns:hasNetworkhas networkprns:hasPublicationVenuepublished inprns:informationResourceReferenceinformation resource referenceprns:isPrimaryPositionis primary positionprns:latitudelatitudeprns:longitudelongitudeprns:mainImagephotoprns:maxWeightmaximum weightprns:medlineTAjournal title abbreviationprns:meshDescriptorUIMeSH DescriptorUIprns:meshSemanticGroupNameMeSH semantic group nameprns:minWeightminimum weightprns:numberOfAuthorsnumber of authorsprns:numberOfConnectionsnumber of connectionsprns:numberOfPublicationsnumber of publicationsprns:personIdPerson IDprns:personInPrimaryPositionperson in primary positionprns:physicalNeighborOfphysical neighborprns:pluginSearchableDataProfilesRNS Plugin Searchable Dataprns:positionInDepartmentposition in departmentprns:predicateNodepredicate nodeprns:publicationDatepublication dateprns:similarTosimilar toprns:sortOrdersort orderprns:uniquenessWeightuniqueness weightprns:yearyearAcademic ArticleArticleDocumentbibo:pmidPubMed IdentifierAddressvivo:addressCitycityvivo:addressPostalCodepostal codevivo:addressStatestate or provincevivo:authorInAuthorshipselected publicationsvivo:authorRankauthor rank in publicationAuthorshipDepartmentvivo:hasResearchArearesearch areasvivo:hrJobTitleHR job titleInformation Resourcevivo:linkAnchorTextlink anchor textvivo:linkedAuthorlinked authorvivo:linkedInformationResourcelinked information resourcevivo:mailingAddressmailing addressvivo:personInPositionpositionsPositionvivo:positionInOrganizationposition in organizationvivo:preferredTitlepreferred titleURLLinkvivo:webpagewebpagerdf:predicatepredicaterdf:typetyperdfs:labellabelConceptAgentfoaf:firstNamefirst namefoaf:lastNamelast nameOrganizationPersonD001419Living Beings1644450.742386BacteriaLuisBettencourtLuis Bettencourt41.7886000000000087.598699999999993438Bettencourt, LuisProfessorD004463Occupations41740.946046EcologyEcology and EvolutionMedicine-GastroenterologyMedicine-Genetic MedicineMedicine-Infectious DiseasesSurgery-General SurgeryD004926Living Beings1715960.78355Escherichia coliMeredithCenzer2m5qDq8PHP75hHlsaUXv9Gq0+s+oMeredith Cenzer41.7886000000000087.598699999999993776Cenzer, MeredithInstructorEricPamerEric Pamer41.7886000000000087.598699999999993819Pamer, EricProfessorChicago60637IL2.281370.088134544research areas25.71373.1366160similar to1117selected publicationsD016680Genes & Molecular Sequences441390.908062Genome, BacterialCaraBrookCara Brook41.7886000000000087.598699999999994062Brook, CaraAssistant ProfessorAuthorship 1523635Authorship 1523642Authorship 1524242Authorship 1523534Authorship 1523656Authorship 152366431838145Mickalide H, Kuehn SCell systemsHigher-Order Interaction between Species Inhibits Bacterial Invasion of a Phototroph-Predator Microbial Community. Cell Syst. 2019 12 18; 9(6):521-533.e10.Cell Syst2019-12-11T00:00:002019Higher-Order Interaction between Species Inhibits Bacterial Invasion of a Phototroph-Predator Microbial Community.29762139Shih HY, Mickalide H, Fraebel DT, Goldenfeld N, Kuehn SPhysical biologyBiophysical constraints determine the selection of phenotypic fluctuations during directed evolution. Phys Biol. 2018 07 27; 15(6):065003.Phys Biol2018-07-27T00:00:002018Biophysical constraints determine the selection of phenotypic fluctuations during directed evolution.32358533Ping D, Wang T, Fraebel DT, Maslov S, Sneppen K, Kuehn SThe ISME journalHitchhiking, collapse, and contingency in phage infections of migrating bacterial populations. ISME J. 2020 08; 14(8):2007-2018.ISME J2020-05-01T00:00:002020Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations.27616752Merritt J, Kuehn SScientific reportsQuantitative high-throughput population dynamics in continuous-culture by automated microscopy. Sci Rep. 2016 09 12; 6:33173.Sci Rep2016-09-12T00:00:002016Quantitative high-throughput population dynamics in continuous-culture by automated microscopy.35085485Gowda K, Ping D, Mani M, Kuehn SCellGenomic structure predicts metabolite dynamics in microbial communities. Cell. 2022 02 03; 185(3):530-546.e25.Cell2022-01-31T00:00:002022Genomic structure predicts metabolite dynamics in microbial communities.33163936Fraebel DT, Gowda K, Mani M, Kuehn SiScienceEvolution of Generalists by Phenotypic Plasticity. iScience. 2020 Nov 20; 23(11):101678.iScience2020-10-13T00:00:002020Evolution of Generalists by Phenotypic Plasticity.Authorship 152726435141504Gopalakrishnappa C, Gowda K, Prabhakara KH, Kuehn SiScienceAn ensemble approach to the structure-function problem in microbial communities. iScience. 2022 Feb 18; 25(2):103761.iScience2022-01-11T00:00:002022An ensemble approach to the structure-function problem in microbial communities.RanBlekhmanRan Blekhman41.7886000000000087.598699999999994200Blekhman, RanAssociate ProfessorAuthorship 158980236538887Gowda K, Kuehn SCurrent biology : CBMicrobial biofilms: An ecological tale of Jekyll and Hyde. Curr Biol. 2022 Dec 19; 32(24):R1349-R1351.Curr Biol2022-12-19T00:00:002022Microbial biofilms: An ecological tale of Jekyll and Hyde.D064307Living Beings1183780.66739Microbiotahttps://pamerlab.uchicago.eduPamer Lab websitehttp://dfi.uchicago.eduDuchossois Family Institutehttp://bergelson.uchicago.eduMy laboratory websitehttp://MIUrban.uchicago.eduMansueto Institutehttp://blekhmanlab.orgBlekhman Lab Websitehttps://www.santafe.edu/people/profile/luis-bettencourtSanta Fe Institute@BettencourtLuisblekhmanAuthorship 1637282Authorship 164378537275519Prabhakara KH, Kuehn SiScienceAlgae drive convergent bacterial community assembly at low dilution frequency. iScience. 2023 Jun 16; 26(6):106879.iScience2023-05-16T00:00:002023Algae drive convergent bacterial community assembly at low dilution frequency.34740965de Jesús Astacioa LM, Prabhakara KH, Li Z, Mickalide H, Kuehn SProceedings of the National Academy of Sciences of the United States of AmericaClosed microbial communities self-organize to persistently cycle carbon. Proc Natl Acad Sci U S A. 2021 11 09; 118(45).Proc Natl Acad Sci U S A2021-11-09T00:00:002021Closed microbial communities self-organize to persistently cycle carbon.University of ChicagoCarlVellerCarl Veller41.7886000000000087.598699999999994398Veller, CarlAssistant ProfessorPavitraMuralidharPavitra Muralidhar41.7886000000000087.598699999999994422Muralidhar, PavitraAssistant ProfessorEugene B.Chang0mBqA6AbHszMknJtY0fp/Cv/+94=Eugene B. Chang41.78927490000000-87.601250000000001255Chang, Eugene B.ProfessorAuthorship 166927837783827Skwara A, Gowda K, Yousef M, Diaz-Colunga J, Raman AS, Sanchez A, Tikhonov M, Kuehn SNature ecology & evolutionStatistically learning the functional landscape of microbial communities. Nat Ecol Evol. 2023 Nov; 7(11):1823-1833.Nat Ecol Evol2023-10-02T00:00:002023Statistically learning the functional landscape of microbial communities.JohnAlverdy3WNlHaQHHfX5hHlsaUXv9Gq0+s+oJohn Alverdy41.78927490000000-87.601250000000002676Alverdy, JohnProfessorJoyBergelsonJoy Bergelson41.78927490000000-87.60125000000000464Bergelson, JoyResearch ProfessorAuthorship 1683671638014336Crocker K, Lee KK, Chakraverti-Wuerthwein M, Li Z, Tikhonov M, Mani M, Gowda K, Kuehn SbioRxiv : the preprint server for biologyGlobal patterns in gene content of soil microbiomes emerge from microbial interactions. bioRxiv. 2023 Nov 15.bioRxiv2023-11-15T00:00:002023Global patterns in gene content of soil microbiomes emerge from microbial interactions.Authorship 168641337679599Li Z, Sinha V, Kuehn SNature microbiologyConstraints on microbial metabolic complexity. Nat Microbiol. 2023 Oct; 8(10):1756-1757.Nat Microbiol2023-10-01T00:00:002023Constraints on microbial metabolic complexity.Authorship 1689243Authorship 1689872Authorship 1689626Authorship 168990227420812Merritt J, Kuehn SeLifeWhen communities collide. Elife. 2016 07 15; 5.Elife2016-07-15T00:00:002016When communities collide.38113208Li Z, Selim A, Kuehn SPLoS computational biologyStatistical prediction of microbial metabolic traits from genomes. PLoS Comput Biol. 2023 Dec; 19(12):e1011705.PLoS Comput Biol2023-12-19T00:00:002023Statistical prediction of microbial metabolic traits from genomes.28346136Fraebel DT, Mickalide H, Schnitkey D, Merritt J, Kuhlman TE, Kuehn SeLifeEnvironment determines evolutionary trajectory in a constrained phenotypic space. Elife. 2017 03 27; 6.Elife2017-03-27T00:00:002017Environment determines evolutionary trajectory in a constrained phenotypic space.30230885Merritt J, Kuehn SPhysical review lettersFrequency- and Amplitude-Dependent Microbial Population Dynamics during Cycles of Feast and Famine. Phys Rev Lett. 2018 Aug 31; 121(9):098101.Phys Rev Lett2018-08-31T00:00:002018Frequency- and Amplitude-Dependent Microbial Population Dynamics during Cycles of Feast and Famine.true1Assistant ProfessorAssistant Professortrue1Assistant ProfessorAssistant Professortrue1ProfessorProfessortrue1Assistant ProfessorAssistant Professortrue1Assistant ProfessorAssistant Professortrue1InstructorInstructortrue1Research ProfessorResearch Professortrue1ProfessorProfessortrue1Associate ProfessorAssociate Professortrue1ProfessorProfessortrue1ProfessorProfessor1010