AartiVenkatAarti Venkat41.7886000000000087.598699999999994156Venkat, AartiAssistant Professorplugins:FeaturedVideosFeatured Videosprns:coAuthorOfcoauthor ofprns:emailEncryptedemail addressFaculty Rankprns:fullNamefull nameprns:hasAuthorListauthor listprns:hasFacultyRankhas faculty rankprns:hasNetworkhas networkprns:hasPublicationVenuepublished inprns:informationResourceReferenceinformation resource referenceprns:isPrimaryPositionis primary positionprns:latitudelatitudeprns:longitudelongitudeprns:mainImagephotoprns:maxWeightmaximum weightprns:medlineTAjournal title abbreviationprns:meshDescriptorUIMeSH DescriptorUIprns:meshSemanticGroupNameMeSH semantic group nameprns:minWeightminimum weightprns:numberOfAuthorsnumber of authorsprns:numberOfConnectionsnumber of connectionsprns:numberOfPublicationsnumber of publicationsprns:personIdPerson IDprns:personInPrimaryPositionperson in primary positionprns:physicalNeighborOfphysical neighborprns:pluginSearchableDataProfilesRNS Plugin Searchable Dataprns:positionInDepartmentposition in departmentprns:predicateNodepredicate nodeprns:publicationDatepublication dateprns:similarTosimilar toprns:sortOrdersort orderprns:uniquenessWeightuniqueness weightprns:yearyearAcademic ArticleArticleDocumentbibo:pmidPubMed IdentifierAddressvivo:addressCitycityvivo:addressPostalCodepostal codevivo:addressStatestate or provincevivo:authorInAuthorshipselected publicationsvivo:authorRankauthor rank in publicationAuthorshipDepartmentvivo:hasResearchArearesearch areasvivo:hrJobTitleHR job titleInformation Resourcevivo:linkAnchorTextlink anchor textvivo:linkedAuthorlinked authorvivo:linkedInformationResourcelinked information resourcevivo:mailingAddressmailing addressvivo:personInPositionpositionsPositionvivo:positionInOrganizationposition in organizationvivo:preferredTitlepreferred titleURLLinkvivo:webpagewebpagerdf:predicatepredicaterdf:typetyperdfs:labellabelConceptAgentfoaf:firstNamefirst namefoaf:lastNamelast nameOrganizationPersonKyle M.HernandezKyle M. Hernandez0.000000000000000.000000000000003432Hernandez, Kyle M.Research Assistant ProfessorD001516Living Beings7110.989962BeesAnthropologyRussellTuttlexWp9HrUBFen5hHlsaUXv9Gq0+s+oRussell H. Tuttle41.7886000000000087.598699999999993498Tuttle, RussellProfessorD004330Living Beings814940.726852DrosophilaEcology and Evolution29967485Venkat A, Hahn MW, Thornton JWNature ecology & evolutionMultinucleotide mutations cause false inferences of lineage-specific positive selection. Nat Ecol Evol. 2018 08; 2(8):1280-1288.Nat Ecol Evol2018-07-02T00:00:002018Multinucleotide mutations cause false inferences of lineage-specific positive selection.Medicine-GastroenterologyMedicine-Computational Biomedicine and Biomedical Data ScienceD009154Physiology70239520.442648MutationD012641Physiology1175020.72207Selection, GeneticObstetrics and Gynecology-Reproductive Endocrinology and Infertility23091028Ségurel L, Thompson EE, Flutre T, Lovstad J, Venkat A, Margulis SW, Moyse J, Ross S, Gamble K, Sella G, Ober C, Przeworski MProceedings of the National Academy of Sciences of the United States of AmericaThe ABO blood group is a trans-species polymorphism in primates. Proc Natl Acad Sci U S A. 2012 Nov 06; 109(45):18493-8.Proc Natl Acad Sci U S A2012-10-22T00:00:002012The ABO blood group is a trans-species polymorphism in primates.22422862Auton A, Fledel-Alon A, Pfeifer S, Venn O, Ségurel L, Street T, Leffler EM, Bowden R, Aneas I, Broxholme J, Humburg P, Iqbal Z, Lunter G, Maller J, Hernandez RD, Melton C, Venkat A, Nobrega MA, Bontrop R, Myers S, Donnelly P, Przeworski M, McVean GScience (New York, N.Y.)A fine-scale chimpanzee genetic map from population sequencing. Science. 2012 Apr 13; 336(6078):193-8.Science2012-03-15T00:00:002012A fine-scale chimpanzee genetic map from population sequencing.22984349Leffler EM, Bullaughey K, Matute DR, Meyer WK, Ségurel L, Venkat A, Andolfatto P, Przeworski MPLoS biologyRevisiting an old riddle: what determines genetic diversity levels within species? PLoS Biol. 2012; 10(9):e1001388.PLoS Biol2012-09-11T00:00:002012Revisiting an old riddle: what determines genetic diversity levels within species?Chicago60637IL0.6551220.011538185research areas0.671820.02713779coauthor of7.677471.2866960similar to1111selected publicationsAuthorship 15501216Authorship 1550353Authorship 15503899Authorship 1550419Authorship 1551031Authorship 1550722Authorship 1550862Authorship 1550945Authorship 155100321482769Woodard SH, Fischman BJ, Venkat A, Hudson ME, Varala K, Cameron SA, Clark AG, Robinson GEProceedings of the National Academy of Sciences of the United States of AmericaGenes involved in convergent evolution of eusociality in bees. Proc Natl Acad Sci U S A. 2011 May 03; 108(18):7472-7.Proc Natl Acad Sci U S A2011-04-11T00:00:002011Genes involved in convergent evolution of eusociality in bees.25908251Sadd BM, Barribeau SM, Bloch G, de Graaf DC, Dearden P, Elsik CG, Gadau J, Grimmelikhuijzen CJ, Hasselmann M, Lozier JD, Robertson HM, Smagghe G, Stolle E, Van Vaerenbergh M, Waterhouse RM, Bornberg-Bauer E, Klasberg S, Bennett AK, Câmara F, Guigó R, Hoff K, Mariotti M, Munoz-Torres M, Murphy T, Santesmasses D, Amdam GV, Beckers M, Beye M, Biewer M, Bitondi MM, Blaxter ML, Bourke AF, Brown MJ, Buechel SD, Cameron R, Cappelle K, Carolan JC, Christiaens O, Ciborowski KL, Clarke DF, Colgan TJ, Collins DH, Cridge AG, Dalmay T, Dreier S, du Plessis L, Duncan E, Erler S, Evans J, Falcon T, Flores K, Freitas FC, Fuchikawa T, Gempe T, Hartfelder K, Hauser F, Helbing S, Humann FC, Irvine F, Jermiin LS, Johnson CE, Johnson RM, Jones AK, Kadowaki T, Kidner JH, Koch V, Köhler A, Kraus FB, Lattorff HM, Leask M, Lockett GA, Mallon EB, Antonio DS, Marxer M, Meeus I, Moritz RF, Nair A, Näpflin K, Nissen I, Niu J, Nunes FM, Oakeshott JG, Osborne A, Otte M, Pinheiro DG, Rossié N, Rueppell O, Santos CG, Schmid-Hempel R, Schmitt BD, Schulte C, Simões ZL, Soares MP, Swevers L, Winnebeck EC, Wolschin F, Yu N, Zdobnov EM, Aqrawi PK, Blankenburg KP, Coyle M, Francisco L, Hernandez AG, Holder M, Hudson ME, Jackson L, Jayaseelan J, Joshi V, Kovar C, Lee SL, Mata R, Mathew T, Newsham IF, Ngo R, Okwuonu G, Pham C, Pu LL, Saada N, Santibanez J, Simmons D, Thornton R, Venkat A, Walden KK, Wu YQ, Debyser G, Devreese B, Asher C, Blommaert J, Chipman AD, Chittka L, Fouks B, Liu J, O'Neill MP, Sumner S, Puiu D, Qu J, Salzberg SL, Scherer SE, Muzny DM, Richards S, Robinson GE, Gibbs RA, Schmid-Hempel P, Worley KCGenome biologyThe genomes of two key bumblebee species with primitive eusocial organization. Genome Biol. 2015 Apr 24; 16:76.Genome Biol2015-04-24T00:00:002015The genomes of two key bumblebee species with primitive eusocial organization.25977371Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus FB, Helbing S, Moritz RF, Glastad KM, Hunt BG, Goodisman MA, Hauser F, Grimmelikhuijzen CJ, Pinheiro DG, Nunes FM, Soares MP, Tanaka ÉD, Simões ZL, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston JS, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang GScience (New York, N.Y.)Social evolution. Genomic signatures of evolutionary transitions from solitary to group living. Science. 2015 Jun 05; 348(6239):1139-43.Science2015-05-14T00:00:002015Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.BrettBeaulieu-JonesBrett Beaulieu-Jones41.7886000000000087.598699999999994260Beaulieu-Jones, BrettAssistant ProfessorSanaSalihSana Salih41.7886000000000087.598699999999994293Salih, SanaClinical Associatehttp://www.thorntonlab.orgThornton Lab websitehttp://genapps.uchicago.edu/newlabweb/index.htmlLab web sitehttps://anthropology.uchicago.edu/people/faculty/russell-h-tuttleDepartment Websitehttp://manyuanlonglab.uchicago.edu/Long Lab WebsiteD019020Procedures15200.975145Directed Molecular EvolutionAuthorship 163943237416509Cook DE, Venkat A, Yelizarov D, Pouliot Y, Chang PC, Carroll A, De La Vega FMBioinformatics advancesA deep-learning-based RNA-seq germline variant caller. Bioinform Adv. 2023; 3(1):vbad062.Bioinform Adv2023-06-13T00:00:002023A deep-learning-based RNA-seq germline variant caller.Human GeneticsMedicineUniversity of ChicagoDanielMatuteDaniel Matute41.78927490000000-87.601250000000001263Matute, DanielPostdoctoral ScholarAmberJohnsonAmber Johnson41.7886000000000087.598699999999994453Johnson, AmberAssistant ProfessorJosephThorntonJoseph Thornton41.78927490000000-87.601250000000001722Thornton, JosephProfessorMollyPrzeworskiMolly Przeworski41.78927490000000-87.601250000000001825Przeworski, MollyPROFESSORRobertGrossmanRobert Grossman41.78927490000000-87.601250000000001839Grossman, RobertProfessorManyuanLongManyuan Long41.78927490000000-87.601250000000002617Long, ManyuanProfessorAnnaDi RienzoAnna Di Rienzo41.78927490000000-87.60125000000000993Di Rienzo, AnnaProfessorAuthorship 168569238050021Hernandez KM, Venkat A, Elbers DC, Bihn JR, Brophy MT, Do NV, La J, Liu Q, Prokhorenkov A, Metoki-Shlubsky N, Sung FC, Paller CJ, Fillmore NR, Grossman RLCold Spring Harbor molecular case studiesProstate cancer patient stratification by molecular signatures in the Veterans Precision Oncology Data Commons. Cold Spring Harb Mol Case Stud. 2023 Dec; 9(4).Cold Spring Harb Mol Case Stud2024-01-10T00:00:002024Prostate cancer patient stratification by molecular signatures in the Veterans Precision Oncology Data Commons.ArielHalper-StrombergAriel Halper-Stromberg41.7886000000000087.598699999999994518Halper-Stromberg, ArielClinical Associatetrue1ProfessorProfessortrue1ProfessorProfessortrue1ProfessorProfessortrue1PROFESSORPROFESSORtrue1ProfessorProfessortrue1Postdoctoral ScholarPostdoctoral Scholartrue1ProfessorProfessortrue1Assistant ProfessorAssistant Professortrue1Assistant ProfessorAssistant Professortrue1Assistant ProfessorAssistant Professortrue1Research Assistant ProfessorResearch Assistant Professortrue1Clinical AssociateClinical Associatetrue1Clinical AssociateClinical Associate1010Medicine-Cardiology26198179Meyer WK, Venkat A, Kermany AR, van de Geijn B, Zhang S, Przeworski MMolecular ecologyEvolutionary history inferred from the de novo assembly of a nonmodel organism, the blue-eyed black lemur. Mol Ecol. 2015 Sep; 24(17):4392-405.Mol Ecol2015-08-24T00:00:002015Evolutionary history inferred from the de novo assembly of a nonmodel organism, the blue-eyed black lemur.27440664Comeault AA, Venkat A, Matute DRProceedings. Biological sciencesCorrelated evolution of male and female reproductive traits drive a cascading effect of reinforcement in Drosophila yakuba. Proc Biol Sci. 2016 Jul 27; 283(1835).Proc Biol Sci2016-07-27T00:00:002016Correlated evolution of male and female reproductive traits drive a cascading effect of reinforcement in Drosophila yakuba.