EmilSidkyEmil Sidky41.78927490000000-87.601250000000001031Sidky, EmilResearch Professorplugins:FeaturedVideosFeatured Videosprns:coAuthorOfcoauthor ofprns:emailEncryptedemail addressprns:endDateend dateprns:fullNamefull nameprns:grantAwardedBygrant awarded byprns:hasAuthorListauthor listprns:hasNetworkhas networkprns:hasPublicationVenuepublished inprns:informationResourceReferenceinformation resource referenceprns:isPrimaryPositionis primary positionprns:latitudelatitudeprns:longitudelongitudeprns:mainImagephotoprns:maxWeightmaximum weightprns:medlineTAjournal title abbreviationprns:meshDescriptorUIMeSH DescriptorUIprns:meshSemanticGroupNameMeSH semantic group nameprns:minWeightminimum weightprns:numberOfAuthorsnumber of authorsprns:numberOfConnectionsnumber of connectionsprns:numberOfPublicationsnumber of publicationsprns:personIdPerson IDprns:personInPrimaryPositionperson in primary positionprns:physicalNeighborOfphysical neighborprns:pluginSearchableDataProfilesRNS Plugin Searchable Dataprns:positionInDepartmentposition in departmentprns:predicateNodepredicate nodeprns:principalInvestigatorNameprincipal investigator nameprns:publicationDatepublication dateprns:similarTosimilar toprns:sortOrdersort orderprns:startDatestart dateprns:uniquenessWeightuniqueness weightprns:yearyearAcademic ArticleArticleDocumentbibo:pmidPubMed IdentifierAddressvivo:addressCitycityvivo:addressPostalCodepostal codevivo:addressStatestate or provinceAgreementvivo:authorInAuthorshipselected publicationsvivo:authorRankauthor rank in publicationAuthorshipDepartmentGrantvivo:hasResearchArearesearch areasvivo:hasResearcherRoleresearch activitiesvivo:hrJobTitleHR job titleInformation Resourcevivo:linkAnchorTextlink anchor textvivo:linkedAuthorlinked authorvivo:linkedInformationResourcelinked information resourcevivo:mailingAddressmailing addressvivo:personInPositionpositionsPositionvivo:positionInOrganizationposition in organizationvivo:preferredTitlepreferred titleResearcher Rolevivo:researcherRoleOfresearcher role ofRolevivo:roleContributesTocontributes tovivo:sponsorAwardIdsponsor award idURLLinkvivo:webpagewebpagerdf:predicatepredicaterdf:typetyperdfs:labellabelConceptAgentfoaf:firstNamefirst namefoaf:lastNamelast nameOrganizationPersonAuthorship 1010521Authorship 101179225685824Sidky EY, Kraemer DN, Roth EG, Ullberg C, Reiser IS, Pan XJournal of medical imaging (Bellingham, Wash.)Analysis of iterative region-of-interest image reconstruction for x-ray computed tomography. J Med Imaging (Bellingham). 2014 Oct 03; 1(3):031007.J Med Imaging (Bellingham)2014-10-03T00:00:002014Analysis of iterative region-of-interest image reconstruction for x-ray computed tomography.25685825Sanchez AA, Sidky EY, Pan XJournal of medical imaging (Bellingham, Wash.)Region of interest based Hotelling observer for computed tomography with comparison to alternative methods. J Med Imaging (Bellingham). 2014 Dec 08; 1(3):031010.J Med Imaging (Bellingham)2014-12-08T00:00:002014Region of interest based Hotelling observer for computed tomography with comparison to alternative methods.D000465Concepts & Ideas53018280.544707AlgorithmsAuthorship 103410328436858Schmidt TG, Barber RF, Sidky EYIEEE transactions on medical imagingA Spectral CT Method to Directly Estimate Basis Material Maps From Experimental Photon-Counting Data. IEEE Trans Med Imaging. 2017 09; 36(9):1808-1819.IEEE Trans Med Imaging2017-04-24T00:00:002017A Spectral CT Method to Directly Estimate Basis Material Maps From Experimental Photon-Counting Data.Authorship 1042921Authorship 104136628519635Han X, Silver M, Oishi S, Zhang Z, Bian J, Sidky E, Pan XMedical physicsWE-G-217BCD-06: Fully Incorporated Scanning Geometry for Improved Accuracy in C-Arm CBCT Image Reconstruction. Med Phys. 2012 Jun; 39(6Part28):3973.Med Phys2012-06-01T00:00:002012WE-G-217BCD-06: Fully Incorporated Scanning Geometry for Improved Accuracy in C-Arm CBCT Image Reconstruction.28523707Sidky EY, Duchin Y, Pan X, Ullberg CMedical physicsA constrained, total-variation minimization algorithm for low-intensity x-ray CT. Med Phys. 2011 Jul; 38(S1):S117-S125.Med Phys2011-07-01T00:00:002011A constrained, total-variation minimization algorithm for low-intensity x-ray CT.KunioDoiKunio Doi41.7886000000000087.598699999999993668Doi, KunioRalph W. Gerard Professor of Biological Sciences, EmeritusRadiation and Cellular OncologyAuthorship 1134507Authorship 1146834Authorship 1151963Authorship 1125364Authorship 1237452Authorship 1182753Authorship 1211192Authorship 121441729570054Zhang Z, Rose S, Ye J, Perkins AE, Chen B, Kao CM, Sidky EY, Tung CH, Pan XIEEE transactions on bio-medical engineeringOptimization-Based Image Reconstruction From Low-Count, List-Mode TOF-PET Data. IEEE Trans Biomed Eng. 2018 04; 65(4):936-946.IEEE Trans Biomed Eng2018-04-01T00:00:002018Optimization-Based Image Reconstruction From Low-Count, List-Mode TOF-PET Data.29391859Barber RF, Sidky EYJournal of machine learning research : JMLRMOCCA: Mirrored Convex/Concave Optimization for Nonconvex Composite Functions. J Mach Learn Res. 2016; 17(144):1-51.J Mach Learn Res2016-01-01T00:00:002016MOCCA: Mirrored Convex/Concave Optimization for Nonconvex Composite Functions.30319317Xia D, Chang YB, Manak J, Siddiqui AH, Zhang Z, Chen B, Sidky EY, Pan XSensing and imagingReduction of Angularly-Varying-Data Truncation in C-Arm CBCT Imaging. Sens Imaging. 2018 Dec; 19.Sens Imaging2018-03-23T00:00:002018Reduction of Angularly-Varying-Data Truncation in C-Arm CBCT Imaging.29516523Chen B, Zhang Z, Xia D, Sidky EY, Pan XMedical physicsAlgorithm-enabled partial-angular-scan configurations for dual-energy CT. Med Phys. 2018 May; 45(5):1857-1870.Med Phys2018-03-30T00:00:002018Algorithm-enabled partial-angular-scan configurations for dual-energy CT.30140715Aggrawal HO, Andersen MS, Rose S, Sidky EYIEEE transactions on computational imagingA Convex Reconstruction Model for X-ray Tomographic Imaging with Uncertain Flat-fields. IEEE Trans Comput Imaging. 2018 Mar; 4(1):17-31.IEEE Trans Comput Imaging2017-07-04T00:00:002017A Convex Reconstruction Model for X-ray Tomographic Imaging with Uncertain Flat-fields.30370544Ha W, Sidky EY, Barber RF, Schmidt TG, Pan XMedical physicsEstimating the spectrum in computed tomography via Kullback-Leibler divergence constrained optimization. Med Phys. 2019 Jan; 46(1):81-92.Med Phys2018-12-13T00:00:002018Estimating the spectrum in computed tomography via Kullback-Leibler divergence constrained optimization.29094680Chen B, Zhang Z, Sidky EY, Xia D, Pan XPhysics in medicine and biologyImage reconstruction and scan configurations enabled by optimization-based algorithms in multispectral CT. Phys Med Biol. 2017 Nov 02; 62(22):8763-8793.Phys Med Biol2017-11-02T00:00:002017Image reconstruction and scan configurations enabled by optimization-based algorithms in multispectral CT.28901614Rose SD, Sanchez AA, Sidky EY, Pan XMedical physicsInvestigating simulation-based metrics for characterizing linear iterative reconstruction in digital breast tomosynthesis. Med Phys. 2017 Sep; 44(9):e279-e296.Med Phys2017-09-01T00:00:002017Investigating simulation-based metrics for characterizing linear iterative reconstruction in digital breast tomosynthesis.Authorship 126971230662927Rose SD, Sidky EY, Reiser I, Pan XJournal of medical imaging (Bellingham, Wash.)Imaging of fiber-like structures in digital breast tomosynthesis. J Med Imaging (Bellingham). 2019 Jul; 6(3):031404.J Med Imaging (Bellingham)2019-01-11T00:00:002019Imaging of fiber-like structures in digital breast tomosynthesis.Authorship 211632Authorship 252021Authorship 252042Authorship 267204Authorship 268471Authorship 320933Authorship 299793Authorship 329184Authorship 278653Authorship 333053Authorship 284093Authorship 358231Authorship 399491Authorship 399671Authorship 429135D007091Activities & Behaviors30912000.630339Image Processing, Computer-AssistedD011857Procedures844640.766079Radiographic Image Interpretation, Computer-AssistedAuthorship 354582Authorship 65733Authorship 417411Authorship 68431Authorship 463701Authorship 447815Authorship 483872Authorship 65672Authorship 482881Authorship 67531D014057Procedures54325940.47349Tomography, X-Ray ComputedAuthorship 140100232798295Ha W, Sidky EY, Foygel Barber R, Gilat Schmidt T, Pan XMedical physicsErratum: Estimating the spectrum in computed tomography via Kullback-Leibler divergence constrained optimization. [Med. Phys. 46(1), p. 81-92 (2019)]. Med Phys. 2020 08; 47(8):3772.Med Phys2020-05-27T00:00:002020Erratum: Estimating the spectrum in computed tomography via Kullback-Leibler divergence constrained optimization. [Med. Phys. 46(1), p. 81-92 (2019)].Authorship 232501Authorship 265173Authorship 140456132870781Sidky EY, Lorente I, Brankov JG, Pan XIEEE transactions on bio-medical engineeringDo CNNs Solve the CT Inverse Problem? IEEE Trans Biomed Eng. 2021 06; 68(6):1799-1810.IEEE Trans Biomed Eng2021-05-21T00:00:002021Do CNNs Solve the CT Inverse Problem?Authorship 428534Authorship 491374Authorship 65572Authorship 141287533033733Chen B, Liu X, Zhang Z, Xia D, Sidky EY, Pan XJournal of medical imaging (Bellingham, Wash.)Optimization-based algorithm for solving the discrete x-ray transform with nonlinear partial volume effect. J Med Imaging (Bellingham). 2020 Sep; 7(5):053502.J Med Imaging (Bellingham)2020-10-06T00:00:002020Optimization-based algorithm for solving the discrete x-ray transform with nonlinear partial volume effect.12200941Pan X, Sidky EY, Kao CM, Zou Y, Metz CEPhysics in medicine and biologyShort-scan SPECT imaging with non-uniform attenuation and 3D distance-dependent spatial resolution. Phys Med Biol. 2002 Aug 07; 47(15):2811-33.Phys Med Biol2002-08-07T00:00:002002Short-scan SPECT imaging with non-uniform attenuation and 3D distance-dependent spatial resolution.Authorship 142989433373973Chen B, Zhang Z, Xia D, Sidky EY, Pan XComputerized medical imaging and graphics : the official journal of the Computerized Medical Imaging SocietyNon-convex primal-dual algorithm for image reconstruction in spectral CT. Comput Med Imaging Graph. 2021 01; 87:101821.Comput Med Imaging Graph2020-12-08T00:00:002020Non-convex primal-dual algorithm for image reconstruction in spectral CT.15248578Sidky EY, Zou Y, Pan XPhysics in medicine and biologyImpact of polychromatic x-ray sources on helical, cone-beam computed tomography and dual-energy methods. Phys Med Biol. 2004 Jun 07; 49(11):2293-303.Phys Med Biol2004-06-07T00:00:002004Impact of polychromatic x-ray sources on helical, cone-beam computed tomography and dual-energy methods.15248583Zou Y, Sidky EY, Pan XPhysics in medicine and biologyPartial volume and aliasing artefacts in helical cone-beam CT. Phys Med Biol. 2004 Jun 07; 49(11):2365-75.Phys Med Biol2004-06-07T00:00:002004Partial volume and aliasing artefacts in helical cone-beam CT.16156349Anastasio MA, Zhang J, Sidky EY, Zou Y, Xia D, Pan XIEEE transactions on medical imagingFeasibility of half-data image reconstruction in 3-D reflectivity tomography with a spherical aperture. IEEE Trans Med Imaging. 2005 Sep; 24(9):1100-12.IEEE Trans Med Imaging2005-09-01T00:00:002005Feasibility of half-data image reconstruction in 3-D reflectivity tomography with a spherical aperture.Radiology-Basic Sciences13045267SIDKY EThe Journal of the Egyptian Medical AssociationPlastic surgery of the mouth. J Egypt Med Assoc. 1952; 35(11-12):821-5.J Egypt Med Assoc1952-01-01T00:00:001952Plastic surgery of the mouth.16827488Yu L, Zou Y, Sidky EY, Pelizzari CA, Munro P, Pan XIEEE transactions on medical imagingRegion of interest reconstruction from truncated data in circular cone-beam CT. IEEE Trans Med Imaging. 2006 Jul; 25(7):869-81.IEEE Trans Med Imaging2006-07-01T00:00:002006Region of interest reconstruction from truncated data in circular cone-beam CT.15773783Pan X, Zou Y, Xia D, Sidky EYTechnology in cancer research & treatmentReconstruction of 3D regions-of-interest from data in reduced helical cone-beam scans. Technol Cancer Res Treat. 2005 Apr; 4(2):143-50.Technol Cancer Res Treat2005-04-01T00:00:002005Reconstruction of 3D regions-of-interest from data in reduced helical cone-beam scans.Authorship 145081433752167Zhang Z, Chen B, Xia D, Sidky EY, Pan XMedical image analysisDirectional-TV algorithm for image reconstruction from limited-angular-range data. Med Image Anal. 2021 05; 70:102030.Med Image Anal2021-03-05T00:00:002021Directional-TV algorithm for image reconstruction from limited-angular-range data.15815087Sidky EY, Zou Y, Pan XPhysics in medicine and biologyMinimum data image reconstruction algorithms with shift-invariant filtering for helical, cone-beam CT. Phys Med Biol. 2005 Apr 21; 50(8):1643-57.Phys Med Biol2005-03-30T00:00:002005Minimum data image reconstruction algorithms with shift-invariant filtering for helical, cone-beam CT.16304723Zou Y, Pan X, Sidky EYJournal of the Optical Society of America. A, Optics, image science, and visionTheory and algorithms for image reconstruction on chords and within regions of interest. J Opt Soc Am A Opt Image Sci Vis. 2005 Nov; 22(11):2372-84.J Opt Soc Am A Opt Image Sci Vis2005-11-01T00:00:002005Theory and algorithms for image reconstruction on chords and within regions of interest.19964255Sidky EY, Pan XAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International ConferenceAnalysis of image-reconstruction algorithms for circular, cone-beam CT by Hotelling observer performance on a detection task. Annu Int Conf IEEE Eng Med Biol Soc. 2009; 2009:997-9.Annu Int Conf IEEE Eng Med Biol Soc2009-01-01T00:00:002009Analysis of image-reconstruction algorithms for circular, cone-beam CT by Hotelling observer performance on a detection task.20588896Sidky EY, Anastasio MA, Pan XOptics expressImage reconstruction exploiting object sparsity in boundary-enhanced X-ray phase-contrast tomography. Opt Express. 2010 May 10; 18(10):10404-22.Opt Express2010-05-10T00:00:002010Image reconstruction exploiting object sparsity in boundary-enhanced X-ray phase-contrast tomography.17804878Yu L, Xia D, Zou Y, Sidky EY, Bian J, Pan XPhysics in medicine and biologyA rebinned backprojection-filtration algorithm for image reconstruction in helical cone-beam CT. Phys Med Biol. 2007 Sep 21; 52(18):5497-508.Phys Med Biol2007-08-31T00:00:002007A rebinned backprojection-filtration algorithm for image reconstruction in helical cone-beam CT.17491625Anastasio MA, Zou Y, Sidky EY, Pan XJournal of the Optical Society of America. A, Optics, image science, and visionLocal cone-beam tomography image reconstruction on chords. J Opt Soc Am A Opt Image Sci Vis. 2007 Jun; 24(6):1569-79.J Opt Soc Am A Opt Image Sci Vis2007-06-01T00:00:002007Local cone-beam tomography image reconstruction on chords.21529012Xia D, Xiao X, Bian J, Han X, Sidky EY, De Carlo F, Pan XThe Review of scientific instrumentsImage reconstruction from sparse data in synchrotron-radiation-based microtomography. Rev Sci Instrum. 2011 Apr; 82(4):043706.Rev Sci Instrum2011-04-01T00:00:002011Image reconstruction from sparse data in synchrotron-radiation-based microtomography.22565698Xu Q, Sidky EY, Pan X, Stampanoni M, Modregger P, Anastasio MAOptics expressInvestigation of discrete imaging models and iterative image reconstruction in differential X-ray phase-contrast tomography. Opt Express. 2012 May 07; 20(10):10724-49.Opt Express2012-05-07T00:00:002012Investigation of discrete imaging models and iterative image reconstruction in differential X-ray phase-contrast tomography.22850194Han X, Bian J, Ritman EL, Sidky EY, Pan XPhysics in medicine and biologyOptimization-based reconstruction of sparse images from few-view projections. Phys Med Biol. 2012 Aug 21; 57(16):5245-73.Phys Med Biol2012-07-31T00:00:002012Optimization-based reconstruction of sparse images from few-view projections.18594635LaRoque SJ, Sidky EY, Pan XJournal of the Optical Society of America. A, Optics, image science, and visionAccurate image reconstruction from few-view and limited-angle data in diffraction tomography. J Opt Soc Am A Opt Image Sci Vis. 2008 Jul; 25(7):1772-82.J Opt Soc Am A Opt Image Sci Vis2008-07-01T00:00:002008Accurate image reconstruction from few-view and limited-angle data in diffraction tomography.4958998Sidky EEgyptian dental journalThe therapeutic effect of corticosteroid-antibiotic combination in pulpal and periodontal affections. Egypt Dent J. 1966 Apr; 12(2):16-25.Egypt Dent J1966-04-01T00:00:001966The therapeutic effect of corticosteroid-antibiotic combination in pulpal and periodontal affections.Authorship 147641134169538Sidky EY, Phillips JP, Zhou W, Ongie G, Cruz-Bastida JP, Reiser IS, Anastasio MA, Pan XMedical physicsA signal detection model for quantifying overregularization in nonlinear image reconstruction. Med Phys. 2021 Oct; 48(10):6312-6323.Med Phys2021-06-25T00:00:002021A signal detection model for quantifying overregularization in nonlinear image reconstruction.19994501Sidky EY, Pan X, Reiser IS, Nishikawa RM, Moore RH, Kopans DBMedical physicsEnhanced imaging of microcalcifications in digital breast tomosynthesis through improved image-reconstruction algorithms. Med Phys. 2009 Nov; 36(11):4920-32.Med Phys2009-11-01T00:00:002009Enhanced imaging of microcalcifications in digital breast tomosynthesis through improved image-reconstruction algorithms.4524093Taher M, Sidky EEgyptian dental journalThe use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. II. Qualitative assessment for the effect of aging. Egypt Dent J. 1973 Apr; 19(2):197-210.Egypt Dent J1973-04-01T00:00:001973The use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. II. Qualitative assessment for the effect of aging.22538474Sidky EY, Jørgensen JH, Pan XPhysics in medicine and biologyConvex optimization problem prototyping for image reconstruction in computed tomography with the Chambolle-Pock algorithm. Phys Med Biol. 2012 May 21; 57(10):3065-91.Phys Med Biol2012-04-27T00:00:002012Convex optimization problem prototyping for image reconstruction in computed tomography with the Chambolle-Pock algorithm.20962368Bian J, Siewerdsen JH, Han X, Sidky EY, Prince JL, Pelizzari CA, Pan XPhysics in medicine and biologyEvaluation of sparse-view reconstruction from flat-panel-detector cone-beam CT. Phys Med Biol. 2010 Nov 21; 55(22):6575-99.Phys Med Biol2010-10-20T00:00:002010Evaluation of sparse-view reconstruction from flat-panel-detector cone-beam CT.Authorship 148328434320478Chen B, Zhang Z, Xia D, Sidky EY, Pan XPhysics in medicine and biologyDual-energy CT imaging with limited-angular-range data. Phys Med Biol. 2021 09 17; 66(18).Phys Med Biol2021-09-17T00:00:002021Dual-energy CT imaging with limited-angular-range data.4505010Taher M, Sidky E, Hassanein EEgyptian dental journalThe use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. 1. Qualitative assessment. Egypt Dent J. 1972 Apr; 18(2):97-116.Egypt Dent J1972-04-01T00:00:001972The use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. 1. Qualitative assessment.5224454Sidky EEgyptian dental journalRoot canal treatment of deciduous teeth. Egypt Dent J. 1966 Jan; 12(1):3-12.Egypt Dent J1966-01-01T00:00:001966Root canal treatment of deciduous teeth.21978112Sidky EY, Duchin Y, Pan X, Ullberg CMedical physicsA constrained, total-variation minimization algorithm for low-intensity x-ray CT. Med Phys. 2011 Jul; 38 Suppl 1:S117.Med Phys2011-07-01T00:00:002011A constrained, total-variation minimization algorithm for low-intensity x-ray CT.17948724Xia D, Yu L, Sidky EY, Zou Y, Zuo N, Pan XIEEE transactions on medical imagingNoise properties of chord-image reconstruction. IEEE Trans Med Imaging. 2007 Oct; 26(10):1328-44.IEEE Trans Med Imaging2007-10-01T00:00:002007Noise properties of chord-image reconstruction.4534867Taher M, Hassanein E, Sidky EEgyptian dental journalThe use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. Part IV: Effect of retrofilling procedure on the sealing efficiency of endomethasone. Egypt Dent J. 1974 Oct; 20(4):1-12.Egypt Dent J1974-10-01T00:00:001974The use of fluorescent dye for detecting the relative sealing efficiency of various root canal sealers. Part IV: Effect of retrofilling procedure on the sealing efficiency of endomethasone.Authorship 150140434569984Chen B, Zhang Z, Xia D, Sidky EY, Pan XJournal of X-ray science and technologyDual-energy CT imaging over non-overlapping, orthogonal arcs of limited-angular ranges. J Xray Sci Technol. 2021; 29(6):975-985.J Xray Sci Technol2021-01-01T00:00:002021Dual-energy CT imaging over non-overlapping, orthogonal arcs of limited-angular ranges.20977983Han X, Bian J, Eaker DR, Kline TL, Sidky EY, Ritman EL, Pan XIEEE transactions on medical imagingAlgorithm-enabled low-dose micro-CT imaging. IEEE Trans Med Imaging. 2011 Mar; 30(3):606-20.IEEE Trans Med Imaging2010-10-25T00:00:002010Algorithm-enabled low-dose micro-CT imaging.15715419Zou Y, Pan X, Sidky EYPhysics in medicine and biologyImage reconstruction in regions-of-interest from truncated projections in a reduced fan-beam scan. Phys Med Biol. 2005 Jan 07; 50(1):13-27.Phys Med Biol2005-01-07T00:00:002005Image reconstruction in regions-of-interest from truncated projections in a reduced fan-beam scan.18701771Sidky EY, Pan XPhysics in medicine and biologyImage reconstruction in circular cone-beam computed tomography by constrained, total-variation minimization. Phys Med Biol. 2008 Sep 07; 53(17):4777-807.Phys Med Biol2008-08-13T00:00:002008Image reconstruction in circular cone-beam computed tomography by constrained, total-variation minimization.Authorship 152104435020215Zhang Z, Chen B, Xia D, Sidky EY, Pan XMedical physicsImage reconstruction from data over two orthogonal arcs of limited-angular ranges. Med Phys. 2022 Mar; 49(3):1468-1480.Med Phys2022-01-27T00:00:002022Image reconstruction from data over two orthogonal arcs of limited-angular ranges.Authorship 152350135083750Sidky EY, Pan XMedical physicsReport on the AAPM deep-learning sparse-view CT grand challenge. Med Phys. 2022 Aug; 49(8):4935-4943.Med Phys2022-02-09T00:00:002022Report on the AAPM deep-learning sparse-view CT grand challenge.D019047Objects994260.826109Phantoms, ImagingAuthorship 153775535318699Schmidt TG, Sammut BA, Barber RF, Pan X, Sidky EYMedical physicsAddressing CT metal artifacts using photon-counting detectors and one-step spectral CT image reconstruction. Med Phys. 2022 May; 49(5):3021-3040.Med Phys2022-04-05T00:00:002022Addressing CT metal artifacts using photon-counting detectors and one-step spectral CT image reconstruction.Authorship 1583171Authorship 159368435975670Sidky EY, Paul ER, Gilat-Schmidt T, Pan XMedical physicsSpectral calibration of photon-counting detectors at high photon flux. Med Phys. 2022 Oct; 49(10):6368-6383.Med Phys2022-08-31T00:00:002022Spectral calibration of photon-counting detectors at high photon flux.36550981Chen B, Zhang Z, Xia D, Sidky EY, Gilat-Schmidt T, Pan XBioengineering (Basel, Switzerland)Accurate Image Reconstruction in Dual-Energy CT with Limited-Angular-Range Data Using a Two-Step Method. Bioengineering (Basel). 2022 Dec 06; 9(12).Bioengineering (Basel)2022-12-06T00:00:002022Accurate Image Reconstruction in Dual-Energy CT with Limited-Angular-Range Data Using a Two-Step Method.https://voices.uchicago.edu/larivierelab/My Lab Sitehttps://radiology.uchicago.edu/directory/steffen-sammetUniversity of Chicago Radiology2024-01-31NIHSCHMIDT, TALY GILAT ;SIDKY, EMIL Y2019-05-01Spectral CT metal artifact correctionR01EB0239682022-05-31NIHPAN, XIAOCHUAN2018-09-14Advanced iterative image reconstruction for digital breast tomosynthesis - Resubmission 01R01EB0262822017-03-31NIHSIDKY, EMIL Y2012-04-01Limited Angle Image ReconstructionR01CA1584462008-07-31NIHSIDKY, EMIL Y2004-08-01Helical CT Reconstruction and Lung Cancer ScreeningK01EB003913Co-Principal InvestigatorPrincipal InvestigatorCo-Principal InvestigatorPrincipal InvestigatorAuthorship 1619475Authorship 1622471Authorship 162970237033460Ren Z, Sidky EY, Barber RF, Kao CM, Pan XArXivSimultaneous activity and attenuation estimation in TOF-PET with TV-constrained nonconvex optimization. ArXiv. 2024 Feb 09.ArXiv2024-02-09T00:00:002024Simultaneous activity and attenuation estimation in TOF-PET with TV-constrained nonconvex optimization.36938878Sidky EY, Pan XMedical physicsReport on the AAPM deep-learning spectral CT Grand Challenge. Med Phys. 2024 Feb; 51(2):772-785.Med Phys2023-04-01T00:00:002023Report on the AAPM deep-learning spectral CT Grand Challenge.37058955Zhang Z, Epel B, Chen B, Xia D, Sidky EY, Qiao Z, Halpern H, Pan XJournal of magnetic resonance (San Diego, Calif. : 1997)4D-image reconstruction directly from limited-angular-range data in continuous-wave electron paramagnetic resonance imaging. J Magn Reson. 2023 May; 350:107432.J Magn Reson2023-04-05T00:00:0020234D-image reconstruction directly from limited-angular-range data in continuous-wave electron paramagnetic resonance imaging.RadiologyUniversity of Chicago5.230060.00182325128research areas12.72480.05066289coauthor of199.2017.4332860similar to1194selected publicationsJeffreySourisJeffrey Souris41.78927490000000-87.601250000000001043Souris, JeffreyResearch Associate Professor37523258Schmidt TG, Sidky EY, Pan X, Barber RF, Grönberg F, Sjölin M, Danielsson MMedical physicsConstrained one-step material decomposition reconstruction of head CT data from a silicon photon-counting prototype. Med Phys. 2023 Oct; 50(10):6008-6021.Med Phys2023-07-31T00:00:002023Constrained one-step material decomposition reconstruction of head CT data from a silicon photon-counting prototype.Authorship 1656942Maryellen L.Giger2zE6WYF1GuTQkntjbwjr93A=Maryellen L. Giger41.78927490000000-87.601250000000001358Giger, Maryellen L.ProfessorMichaelVannierMichael W. Vannier41.78927490000000-87.601250000000001421Vannier, MichaelPROFESSORHowardHalpern32poB7EQC+L5hHlsaUXv9Gq0+s+oHoward Halpern41.78927490000000-87.601250000000001456Halpern, HowardProfessorSteffenSammetxHFoBqwQDczbgn4qdUXm+mb7+MTz7LFLSteffen Sammet41.78927490000000-87.601250000000001661Sammet, SteffenProfessorKarenDrukkerKaren Drukker41.78927490000000-87.601250000000001691Drukker, KarenResearch Associate ProfessorChien-MinKaoChien-Min Kao41.78927490000000-87.601250000000001746Kao, Chien-MinAssociate ProfessorYuleiJiangYulei Jiang41.78927490000000-87.601250000000001852Jiang, YuleiAssociate ProfessorPatrick J.La RivierePatrick J. La Riviere41.78927490000000-87.601250000000002163La Riviere, Patrick J.ProfessorAuthorship 167193237837648Rizzo BM, Sidky EY, Schmidt TGMedical physicsDual energy CT reconstruction using the constrained one step spectral image reconstruction algorithm. Med Phys. 2023 Oct 14.Med Phys2023-10-14T00:00:002023Dual energy CT reconstruction using the constrained one step spectral image reconstruction algorithm.BorisEpelBoris Epel41.78927490000000-87.60125000000000266Epel, BorisResearch ProfessorXiaochuanPanXiaochuan Pan41.78927490000000-87.60125000000000373Pan, XiaochuanProfessorIngridReiserIngrid Reiser41.78927490000000-87.60125000000000769Reiser, IngridAssociate ProfessorSamuel G.ArmatoSamuel G. Armato41.78927490000000-87.60125000000000820Armato, Samuel G.Associate ProfessorAuthorship 168303437976869Chen B, Zhang Z, Xia D, Sidky EY, Pan XMedical image analysisPrototyping optimization-based image reconstructions from limited-angular-range data in dual-energy CT. Med Image Anal. 2024 Jan; 91:103025.Med Image Anal2023-11-07T00:00:002023Prototyping optimization-based image reconstructions from limited-angular-range data in dual-energy CT.Authorship 169802438300771Chen B, Zhang Z, Xia D, Sidky EY, Pan XIEEE transactions on bio-medical engineeringAccurate reconstruction of multiple basis images directly from dual-energy data in CT. IEEE Trans Biomed Eng. 2024 Feb 01; PP.IEEE Trans Biomed Eng2024-02-01T00:00:002024Accurate reconstruction of multiple basis images directly from dual-energy data in CT.Authorship 170051238354078Ren Z, Sidky EY, Barber RF, Kao CM, Pan XIEEE transactions on medical imagingSimultaneous activity and attenuation estimation in TOF-PET with TV-constrained nonconvex optimization. IEEE Trans Med Imaging. 2024 Feb 14; PP.IEEE Trans Med Imaging2024-02-14T00:00:002024Simultaneous activity and attenuation estimation in TOF-PET with TV-constrained nonconvex optimization.Authorship 170694238410653Lantz M, Sidky EY, Reiser IS, Pan X, Ongie GArXivEnhancing signal detectability in learning-based CT reconstruction with a model observer inspired loss function. ArXiv. 2024 Feb 15.ArXiv2024-02-15T00:00:002024Enhancing signal detectability in learning-based CT reconstruction with a model observer inspired loss function.38436473Terzioglu F, Sidky EY, Phillips JP, Reiser IS, Bal G, Pan XMedical physicsOptimizing dual-energy CT technique for iodine-based contrast-to-noise ratio, a theoretical study. Med Phys. 2024 Mar 04.Med Phys2024-03-04T00:00:002024Optimizing dual-energy CT technique for iodine-based contrast-to-noise ratio, a theoretical study.Authorship 1707742Authorship 171026538492546Zhang Z, Epel B, Chen B, Xia D, Sidky EY, Halpern H, Pan XJournal of magnetic resonance (San Diego, Calif. : 1997)Accurate reconstruction of 4D spectral-spatial images from sparse-view data in continuous-wave EPRI. J Magn Reson. 2024 Mar 12; 361:107654.J Magn Reson2024-03-12T00:00:002024Accurate reconstruction of 4D spectral-spatial images from sparse-view data in continuous-wave EPRI.true1ProfessorProfessortrue1Research ProfessorResearch Professortrue1Ralph W. Gerard Professor of Biological Sciences, EmeritusRalph W. Gerard Professor of Biological Sciences, Emeritustrue1ProfessorProfessortrue1PROFESSORPROFESSORtrue1Associate ProfessorAssociate Professortrue1Associate ProfessorAssociate Professortrue1Research ProfessorResearch Professortrue1Research Associate ProfessorResearch Associate Professortrue1ProfessorProfessortrue1ProfessorProfessortrue1Research Associate ProfessorResearch Associate Professortrue1Associate ProfessorAssociate Professortrue1Associate ProfessorAssociate Professortrue1ProfessorProfessorAuthorship 653041Authorship 653493Authorship 678912Authorship 707913Authorship 698862Authorship 717985Authorship 73291225173277Athanassiadis AG, La Rivière PJ, Sidky E, Pelizzari C, Pan X, Jaeger HMThe Review of scientific instrumentsX-ray tomography system to investigate granular materials during mechanical loading. Rev Sci Instrum. 2014 Aug; 85(8):083708.Rev Sci Instrum2014-08-01T00:00:002014X-ray tomography system to investigate granular materials during mechanical loading.25281969Sanchez AA, Sidky EY, Pan XMedical physicsTask-based optimization of dedicated breast CT via Hotelling observer metrics. Med Phys. 2014 Oct; 41(10):101917.Med Phys2014-10-01T00:00:002014Task-based optimization of dedicated breast CT via Hotelling observer metrics.23892823Wolf PA, Jørgensen JS, Schmidt TG, Sidky EYPhysics in medicine and biologyFew-view single photon emission computed tomography (SPECT) reconstruction based on a blurred piecewise constant object model. Phys Med Biol. 2013 Aug 21; 58(16):5629-52.Phys Med Biol2013-07-29T00:00:002013Few-view single photon emission computed tomography (SPECT) reconstruction based on a blurred piecewise constant object model.25968400Graff CG, Sidky EYApplied opticsCompressive sensing in medical imaging. Appl Opt. 2015 Mar 10; 54(8):C23-44.Appl Opt2015-03-10T00:00:002015Compressive sensing in medical imaging.25615511Schmidt TG, Zimmerman KC, Sidky EYPhysics in medicine and biologyThe effects of extending the spectral information acquired by a photon-counting detector for spectral CT. Phys Med Biol. 2015 Feb 21; 60(4):1583-600.Phys Med Biol2015-01-23T00:00:002015The effects of extending the spectral information acquired by a photon-counting detector for spectral CT.25939620Jørgensen JS, Sidky EYPhilosophical transactions. Series A, Mathematical, physical, and engineering sciencesHow little data is enough? Phase-diagram analysis of sparsity-regularized X-ray computed tomography. Philos Trans A Math Phys Eng Sci. 2015 Jun 13; 373(2043).Philos Trans A Math Phys Eng Sci2015-06-13T00:00:002015How little data is enough? Phase-diagram analysis of sparsity-regularized X-ray computed tomography.24786683Bian J, Yang K, Boone JM, Han X, Sidky EY, Pan XPhysics in medicine and biologyInvestigation of iterative image reconstruction in low-dose breast CT. Phys Med Biol. 2014 Jun 07; 59(11):2659-85.Phys Med Biol2014-05-01T00:00:002014Investigation of iterative image reconstruction in low-dose breast CT.Authorship 79484325979067Rose S, Andersen MS, Sidky EY, Pan XMedical physicsNoise properties of CT images reconstructed by use of constrained total-variation, data-discrepancy minimization. Med Phys. 2015 May; 42(5):2690-8.Med Phys2015-05-01T00:00:002015Noise properties of CT images reconstructed by use of constrained total-variation, data-discrepancy minimization.Chicago60637ILAuthorship 80001526020490Han X, Pearson E, Pelizzari C, Al-Hallaq H, Sidky EY, Bian J, Pan XPhysics in medicine and biologyAlgorithm-enabled exploration of image-quality potential of cone-beam CT in image-guided radiation therapy. Phys Med Biol. 2015 Jun 21; 60(12):4601-33.Phys Med Biol2015-05-28T00:00:002015Algorithm-enabled exploration of image-quality potential of cone-beam CT in image-guided radiation therapy.Authorship 85104126702408Sánchez AA, Sidky EY, Pan XJournal of medical imaging (Bellingham, Wash.)Use of the Hotelling observer to optimize image reconstruction in digital breast tomosynthesis. J Med Imaging (Bellingham). 2016 Jan; 3(1):011008.J Med Imaging (Bellingham)2015-12-22T00:00:002015Use of the Hotelling observer to optimize image reconstruction in digital breast tomosynthesis.Authorship 88457527046218Zhang Z, Han X, Pearson E, Pelizzari C, Sidky EY, Pan XPhysics in medicine and biologyArtifact reduction in short-scan CBCT by use of optimization-based reconstruction. Phys Med Biol. 2016 May 07; 61(9):3387-406.Phys Med Biol2016-04-05T00:00:002016Artifact reduction in short-scan CBCT by use of optimization-based reconstruction.Authorship 89683227082489Foygel Barber R, Sidky EY, Gilat Schmidt T, Pan XPhysics in medicine and biologyAn algorithm for constrained one-step inversion of spectral CT data. Phys Med Biol. 2016 05 21; 61(10):3784-818.Phys Med Biol2016-04-15T00:00:002016An algorithm for constrained one-step inversion of spectral CT data.Authorship 92704627452653Zhang Z, Ye J, Chen B, Perkins AE, Rose S, Sidky EY, Kao CM, Xia D, Tung CH, Pan XPhysics in medicine and biologyInvestigation of optimization-based reconstruction with an image-total-variation constraint in PET. Phys Med Biol. 2016 08 21; 61(16):6055-84.Phys Med Biol2016-07-25T00:00:002016Investigation of optimization-based reconstruction with an image-total-variation constraint in PET.Authorship 617362Authorship 607201Authorship 609544Authorship 61738123464284Sanchez AA, Sidky EY, Reiser I, Pan XMedical physicsComparison of human and Hotelling observer performance for a fan-beam CT signal detection task. Med Phys. 2013 Mar; 40(3):031104.Med Phys2013-03-01T00:00:002013Comparison of human and Hotelling observer performance for a fan-beam CT signal detection task.23204282Jørgensen JS, Sidky EY, Pan XIEEE transactions on medical imagingQuantifying admissible undersampling for sparsity-exploiting iterative image reconstruction in X-ray CT. IEEE Trans Med Imaging. 2013 Feb; 32(2):460-73.IEEE Trans Med Imaging2012-11-27T00:00:002012Quantifying admissible undersampling for sparsity-exploiting iterative image reconstruction in X-ray CT.23464295Sidky EY, Jørgensen JS, Pan XMedical physicsFirst-order convex feasibility algorithms for x-ray CT. Med Phys. 2013 Mar; 40(3):031115.Med Phys2013-03-01T00:00:002013First-order convex feasibility algorithms for x-ray CT.23257068Bian J, Wang J, Han X, Sidky EY, Shao L, Pan XPhysics in medicine and biologyOptimization-based image reconstruction from sparse-view data in offset-detector CBCT. Phys Med Biol. 2013 Jan 21; 58(2):205-30.Phys Med Biol2012-12-21T00:00:002012Optimization-based image reconstruction from sparse-view data in offset-detector CBCT.Authorship 955224Authorship 954623Authorship 956452Authorship 955801Authorship 960273Authorship 956137Authorship 961822Authorship 96197221318098Xia D, Bian J, Han X, Sidky EY, Pan XIEEE Nuclear Science Symposium conference record. Nuclear Science SymposiumAn Investigation of Compressive-sensing Image Reconstruction from Flying-focal-spot CT Data. IEEE Nucl Sci Symp Conf Rec (1997). 2009 Jan 01; 2009:3458-3462.IEEE Nucl Sci Symp Conf Rec (1997)2009-01-01T00:00:002009An Investigation of Compressive-sensing Image Reconstruction from Flying-focal-spot CT Data.25401059Sidky EY, Chartrand R, Boone JM, Pan XIEEE journal of translational engineering in health and medicineConstrained TpV Minimization for Enhanced Exploitation of Gradient Sparsity: Application to CT Image Reconstruction. IEEE J Transl Eng Health Med. 2014 Jun 30; 2.IEEE J Transl Eng Health Med2014-06-30T00:00:002014Constrained TpV Minimization for Enhanced Exploitation of Gradient Sparsity: Application to CT Image Reconstruction.20559455Levine MS, Sidky EY, Pan XTsinghua science and technologyConsistency Conditions for Cone-Beam CT Data Acquired with a Straight-Line Source Trajectory. Tsinghua Sci Technol. 2010 Feb; 15(1):56-61.Tsinghua Sci Technol2010-02-01T00:00:002010Consistency Conditions for Cone-Beam CT Data Acquired with a Straight-Line Source Trajectory.20376330Pan X, Sidky EY, Vannier MInverse problemsWhy do commercial CT scanners still employ traditional, filtered back-projection for image reconstruction? Inverse Probl. 2009 Jan 01; 25(12):1230009.Inverse Probl2009-01-01T00:00:002009Why do commercial CT scanners still employ traditional, filtered back-projection for image reconstruction?20617122Bian J, Xia D, Sidky EY, Pan XTsinghua science and technologyRegion of Interest Imaging for a General Trajectory with the Rebinned BPF Algorithm. Tsinghua Sci Technol. 2010 Feb; 15(1):68-73.Tsinghua Sci Technol2010-02-01T00:00:002010Region of Interest Imaging for a General Trajectory with the Rebinned BPF Algorithm.27694700Xia D, Langan DA, Solomon SB, Zhang Z, Chen B, Lai H, Sidky EY, Pan XPhysics in medicine and biologyOptimization-based image reconstruction with artifact reduction in C-arm CBCT. Phys Med Biol. 2016 10 21; 61(20):7300-7333.Phys Med Biol2016-10-03T00:00:002016Optimization-based image reconstruction with artifact reduction in C-arm CBCT.20589233Cho S, Sidky EY, Bian J, Pan XTsinghua science and technologyDual-Energy Technique at Low Tube Voltages for Small Animal Imaging. Tsinghua Sci Technol. 2010 Feb; 15(1):79-86.Tsinghua Sci Technol2010-02-01T00:00:002010Dual-Energy Technique at Low Tube Voltages for Small Animal Imaging.20582237Bian J, Han X, Sidky EY, Cao G, Lu J, Zhou O, Pan XTsinghua science and technologyInvestigation of Sparse Data Mouse Imaging Using Micro-CT with a Carbon-Nanotube-Based X-ray Source. Tsinghua Sci Technol. 2010 Feb 01; 15(1):74-78.Tsinghua Sci Technol2010-02-01T00:00:002010Investigation of Sparse Data Mouse Imaging Using Micro-CT with a Carbon-Nanotube-Based X-ray Source.Authorship 96283127019675Jørgensen JS, Sidky EY, Hansen PC, Pan XInverse problems and imaging (Springfield, Mo.)EMPIRICAL AVERAGE-CASE RELATION BETWEEN UNDERSAMPLING AND SPARSITY IN X-RAY CT. Inverse Probl Imaging (Springfield). 2015 May; 9(2):431-446.Inverse Probl Imaging (Springfield)2015-05-01T00:00:002015EMPIRICAL AVERAGE-CASE RELATION BETWEEN UNDERSAMPLING AND SPARSITY IN X-RAY CT.