The University of Chicago Header Logo

Connection

Benoit Roux to Gramicidin

This is a "connection" page, showing publications Benoit Roux has written about Gramicidin.
Connection Strength

3.363
  1. Calculating the Effect of Membrane Thickness on the Lifetime of the Gramicidin A Channel: A Landmark. Biophys J. 2019 11 19; 117(10):1779-1780.
    View in: PubMed
    Score: 0.717
  2. Ion permeation through a narrow channel: using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields. Biophys J. 2006 May 15; 90(10):3447-68.
    View in: PubMed
    Score: 0.279
  3. On the importance of atomic fluctuations, protein flexibility, and solvent in ion permeation. J Gen Physiol. 2004 Dec; 124(6):679-90.
    View in: PubMed
    Score: 0.256
  4. Structure of gramicidin a in a lipid bilayer environment determined using molecular dynamics simulations and solid-state NMR data. J Am Chem Soc. 2003 Aug 13; 125(32):9868-77.
    View in: PubMed
    Score: 0.234
  5. The binding site of sodium in the gramicidin A channel. Novartis Found Symp. 1999; 225:113-24; discussion 124-7.
    View in: PubMed
    Score: 0.170
  6. The binding site of sodium in the gramicidin A channel: comparison of molecular dynamics with solid-state NMR data. Biophys J. 1997 May; 72(5):1930-45.
    View in: PubMed
    Score: 0.151
  7. Valence selectivity of the gramicidin channel: a molecular dynamics free energy perturbation study. Biophys J. 1996 Dec; 71(6):3177-85.
    View in: PubMed
    Score: 0.147
  8. Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel. Biophys J. 1996 Jul; 71(1):19-39.
    View in: PubMed
    Score: 0.143
  9. Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer. Proteins. 1996 Jan; 24(1):92-114.
    View in: PubMed
    Score: 0.138
  10. Ion transport in the gramicidin channel: molecular dynamics study of single and double occupancy. Biophys J. 1995 Mar; 68(3):876-92.
    View in: PubMed
    Score: 0.130
  11. Molecular dynamics simulation of the gramicidin channel in a phospholipid bilayer. Proc Natl Acad Sci U S A. 1994 Nov 22; 91(24):11631-5.
    View in: PubMed
    Score: 0.128
  12. A molecular dynamics study of gating in dioxolane-linked gramicidin A channels. Biophys J. 1994 Oct; 67(4):1370-86.
    View in: PubMed
    Score: 0.127
  13. Molecular dynamics simulations of the gramicidin channel. Annu Rev Biophys Biomol Struct. 1994; 23:731-61.
    View in: PubMed
    Score: 0.120
  14. Ion transport in a model gramicidin channel. Structure and thermodynamics. Biophys J. 1991 May; 59(5):961-81.
    View in: PubMed
    Score: 0.100
  15. The structure of gramicidin A in dimethylsulfoxide/acetone. Eur J Biochem. 1990 Nov 26; 194(1):57-60.
    View in: PubMed
    Score: 0.097
  16. The normal modes of the gramicidin-A dimer channel. Biophys J. 1988 Mar; 53(3):297-309.
    View in: PubMed
    Score: 0.080
  17. Molecular dynamics - potential of mean force calculations as a tool for understanding ion permeation and selectivity in narrow channels. Biophys Chem. 2006 Dec 01; 124(3):251-67.
    View in: PubMed
    Score: 0.071
  18. Framework model for single proton conduction through gramicidin. Biophys J. 2001 Jan; 80(1):12-30.
    View in: PubMed
    Score: 0.049
  19. A combined molecular dynamics and diffusion model of single proton conduction through gramicidin. Biophys J. 2000 Dec; 79(6):2840-57.
    View in: PubMed
    Score: 0.049
  20. Lipid-mediated interactions between intrinsic membrane proteins: a theoretical study based on integral equations. Biophys J. 2000 Dec; 79(6):2867-79.
    View in: PubMed
    Score: 0.049
  21. Proton wires are different. Biophys J. 1999 Nov; 77(5):2331-2.
    View in: PubMed
    Score: 0.045
  22. Statistical mechanical equilibrium theory of selective ion channels. Biophys J. 1999 Jul; 77(1):139-53.
    View in: PubMed
    Score: 0.044
  23. High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints. Structure. 1997 Dec 15; 5(12):1655-69.
    View in: PubMed
    Score: 0.040
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.