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Connection

Matthew Slattery to Transcription Factors

This is a "connection" page, showing publications Matthew Slattery has written about Transcription Factors.
Connection Strength

2.884
  1. Transcriptional reprogramming by oxidative stress occurs within a predefined chromatin accessibility landscape. Free Radic Biol Med. 2021 08 01; 171:319-331.
    View in: PubMed
    Score: 0.457
  2. Absence of a simple code: how transcription factors read the genome. Trends Biochem Sci. 2014 Sep; 39(9):381-99.
    View in: PubMed
    Score: 0.286
  3. Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster. Genome Res. 2014 Jul; 24(7):1224-35.
    View in: PubMed
    Score: 0.284
  4. Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning. PLoS Genet. 2013; 9(9):e1003753.
    View in: PubMed
    Score: 0.268
  5. Enhanced dissection of the regulatory genome. Nat Methods. 2013 Aug; 10(8):710-2.
    View in: PubMed
    Score: 0.267
  6. Interpreting the regulatory genome: the genomics of transcription factor function in Drosophila melanogaster. Brief Funct Genomics. 2012 Sep; 11(5):336-46.
    View in: PubMed
    Score: 0.250
  7. Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins. Cell. 2011 Dec 09; 147(6):1270-82.
    View in: PubMed
    Score: 0.238
  8. Genome-wide tissue-specific occupancy of the Hox protein Ultrabithorax and Hox cofactor Homothorax in Drosophila. PLoS One. 2011 Apr 05; 6(4):e14686.
    View in: PubMed
    Score: 0.227
  9. Establishment of a Developmental Compartment Requires Interactions between Three Synergistic Cis-regulatory Modules. PLoS Genet. 2015 Oct; 11(10):e1005376.
    View in: PubMed
    Score: 0.078
  10. Deconvolving the recognition of DNA shape from sequence. Cell. 2015 Apr 09; 161(2):307-18.
    View in: PubMed
    Score: 0.075
  11. Transcription factor networks in Drosophila melanogaster. Cell Rep. 2014 Sep 25; 8(6):2031-2043.
    View in: PubMed
    Score: 0.072
  12. Comparative analysis of regulatory information and circuits across distant species. Nature. 2014 Aug 28; 512(7515):453-6.
    View in: PubMed
    Score: 0.072
  13. SELEX-seq: a method for characterizing the complete repertoire of binding site preferences for transcription factor complexes. Methods Mol Biol. 2014; 1196:255-78.
    View in: PubMed
    Score: 0.069
  14. A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster. Cell Rep. 2012 Oct 25; 2(4):1014-24.
    View in: PubMed
    Score: 0.063
  15. Transcription factor choice in the Hippo signaling pathway: homothorax and yorkie regulation of the microRNA bantam in the progenitor domain of the Drosophila eye imaginal disc. Genes Dev. 2009 Oct 01; 23(19):2307-19.
    View in: PubMed
    Score: 0.051
  16. New regulators of Drosophila eye development identified from temporal transcriptome changes. Genetics. 2021 04 15; 217(4).
    View in: PubMed
    Score: 0.028
  17. CrebA increases secretory capacity through direct transcriptional regulation of the secretory machinery, a subset of secretory cargo, and other key regulators. Traffic. 2020 09; 21(9):560-577.
    View in: PubMed
    Score: 0.027
  18. cis-regulatory architecture of a short-range EGFR organizing center in the Drosophila melanogaster leg. PLoS Genet. 2018 08; 14(8):e1007568.
    View in: PubMed
    Score: 0.024
  19. Genome-wide association of Yorkie with chromatin and chromatin-remodeling complexes. Cell Rep. 2013 Feb 21; 3(2):309-18.
    View in: PubMed
    Score: 0.016
  20. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Res. 2012 Sep; 22(9):1813-31.
    View in: PubMed
    Score: 0.016
  21. Disentangling the many layers of eukaryotic transcriptional regulation. Annu Rev Genet. 2012; 46:43-68.
    View in: PubMed
    Score: 0.016
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.