Maria DulcettiVibranovskiMaria Dulcetti Vibranovski41.78927490000000-87.601250000000002216Vibranovski, Maria Dulcettiplugins:TwitterTwitterprns:coAuthorOfcoauthor ofprns:emailEncryptedemail addressFaculty Rankprns:fullNamefull nameprns:hasAuthorListauthor listprns:hasFacultyRankhas faculty rankprns:hasNetworkhas networkprns:hasPublicationVenuepublished inprns:informationResourceReferenceinformation resource referenceprns:isPrimaryPositionis primary positionprns:latitudelatitudeprns:longitudelongitudeprns:mainImagephotoprns:maxWeightmaximum weightprns:medlineTAjournal title abbreviationprns:meshDescriptorUIMeSH DescriptorUIprns:meshSemanticGroupNameMeSH semantic group nameprns:minWeightminimum weightprns:numberOfAuthorsnumber of authorsprns:numberOfConnectionsnumber of connectionsprns:numberOfPublicationsnumber of publicationsprns:personIdPerson IDprns:personInPrimaryPositionperson in primary positionprns:physicalNeighborOfphysical neighborprns:pluginSearchableDataProfilesRNS Plugin Searchable Dataprns:positionInDepartmentposition in departmentprns:predicateNodepredicate nodeprns:publicationDatepublication dateprns:similarTosimilar toprns:sortOrdersort orderprns:uniquenessWeightuniqueness weightprns:yearyearAcademic ArticleArticleDocumentbibo:pmidPubMed IdentifierAddressvivo:addressCitycityvivo:addressPostalCodepostal codevivo:addressStatestate or provincevivo:authorInAuthorshipselected publicationsvivo:authorRankauthor rank in publicationAuthorshipDepartmentvivo:hasResearchArearesearch areasvivo:hrJobTitleHR job titleInformation Resourcevivo:linkAnchorTextlink anchor textvivo:linkedAuthorlinked authorvivo:linkedInformationResourcelinked information resourcevivo:mailingAddressmailing addressvivo:personInPositionpositionsPositionvivo:positionInOrganizationposition in organizationvivo:preferredTitlepreferred titleURLLinkvivo:webpagewebpagerdf:predicatepredicaterdf:typetyperdfs:labellabelConceptAgentfoaf:firstNamefirst namefoaf:lastNamelast nameOrganizationPersonAuthorship 102429428377786França GS, Hinske LC, Galante PA, Vibranovski MDFrontiers in geneticsUnveiling the Impact of the Genomic Architecture on the Evolution of Vertebrate microRNAs. Front Genet. 2017; 8:34.Front Genet2017-03-21T00:00:002017Unveiling the Impact of the Genomic Architecture on the Evolution of Vertebrate microRNAs.D004330Living Beings814940.726852DrosophilaEcology and EvolutionD004331Living Beings1115960.694543Drosophila melanogasterObstetrics & GynecologyAuthorship 113773328883481Moreira de Mello JC, Fernandes GR, Vibranovski MD, Pereira LVScientific reportsEarly X chromosome inactivation during human preimplantation development revealed by single-cell RNA-sequencing. Sci Rep. 2017 09 07; 7(1):10794.Sci Rep2017-09-07T00:00:002017Early X chromosome inactivation during human preimplantation development revealed by single-cell RNA-sequencing.Authorship 196663Authorship 130151331221725Raices JB, Otto PA, Vibranovski MDGenome researchHaploid selection drives new gene male germline expression. Genome Res. 2019 07; 29(7):1115-1122.Genome Res2019-06-20T00:00:002019Haploid selection drives new gene male germline expression.Authorship 225181Authorship 1309081031319798Samogy-Costa CI, Varella-Branco E, Monfardini F, Ferraz H, Fock RA, Barbosa RHA, Pessoa ALS, Perez ABA, Lourenço N, Vibranovski M, Krepischi A, Rosenberg C, Passos-Bueno MRJournal of neurodevelopmental disordersA Brazilian cohort of individuals with Phelan-McDermid syndrome: genotype-phenotype correlation and identification of an atypical case. J Neurodev Disord. 2019 07 18; 11(1):13.J Neurodev Disord2019-07-18T00:00:002019A Brazilian cohort of individuals with Phelan-McDermid syndrome: genotype-phenotype correlation and identification of an atypical case.Authorship 264371Authorship 289592Authorship 356741Authorship 308912Authorship 398341Authorship 335954Authorship 448562Authorship 482753Authorship 486991Authorship 418131Authorship 423142Authorship 456685Authorship 465773Authorship 428272D012730Anatomy24570.946732Sex ChromosomesD013091Physiology22370.977453SpermatogenesisAuthorship 448483Authorship 483035Authorship 275113Authorship 374661Authorship 49527311687639Carvalho AB, Dobo BA, Vibranovski MD, Clark AGProceedings of the National Academy of Sciences of the United States of AmericaIdentification of five new genes on the Y chromosome of Drosophila melanogaster. Proc Natl Acad Sci U S A. 2001 Nov 06; 98(23):13225-30.Proc Natl Acad Sci U S A2001-10-30T00:00:002001Identification of five new genes on the Y chromosome of Drosophila melanogaster.12723702Carvalho AB, Vibranovski MD, Carlson JW, Celniker SE, Hoskins RA, Rubin GM, Sutton GG, Adams MD, Myers EW, Clark AGGeneticaY chromosome and other heterochromatic sequences of the Drosophila melanogaster genome: how far can we go? Genetica. 2003 Mar; 117(2-3):227-37.Genetica2003-03-01T00:00:002003Y chromosome and other heterochromatic sequences of the Drosophila melanogaster genome: how far can we go?15688319Sakabe NJ, Vibranovski MD, de Souza SJGenetics and molecular research : GMRA bioinformatics analysis of alternative exon usage in human genes coding for extracellular matrix proteins. Genet Mol Res. 2004 Dec 30; 3(4):532-44.Genet Mol Res2004-12-30T00:00:002004A bioinformatics analysis of alternative exon usage in human genes coding for extracellular matrix proteins.Pharmacological and Physiological SciencesAuthorship 1441092333563972Mahadevaraju S, Fear JM, Akeju M, Galletta BJ, Pinheiro MMLS, Avelino CC, Cabral-de-Mello DC, Conlon K, Dell'Orso S, Demere Z, Mansuria K, Mendonça CA, Palacios-Gimenez OM, Ross E, Savery M, Yu K, Smith HE, Sartorelli V, Yang H, Rusan NM, Vibranovski MD, Matunis E, Oliver BNature communicationsDynamic sex chromosome expression in Drosophila male germ cells. Nat Commun. 2021 02 09; 12(1):892.Nat Commun2021-02-09T00:00:002021Dynamic sex chromosome expression in Drosophila male germ cells.16487520Vibranovski MD, Sakabe NJ, de Souza SJFEBS lettersA possible role of exon-shuffling in the evolution of signal peptides of human proteins. FEBS Lett. 2006 Mar 06; 580(6):1621-4.FEBS Lett2006-02-10T00:00:002006A possible role of exon-shuffling in the evolution of signal peptides of human proteins.18660539Vibranovski MD, Koerich LB, Carvalho ABGeneticsTwo new Y-linked genes in Drosophila melanogaster. Genetics. 2008 Aug; 179(4):2325-7.Genetics2008-07-27T00:00:002008Two new Y-linked genes in Drosophila melanogaster.20798392Zhang YE, Vibranovski MD, Krinsky BH, Long MGenome researchAge-dependent chromosomal distribution of male-biased genes in Drosophila. Genome Res. 2010 Nov; 20(11):1526-33.Genome Res2010-08-26T00:00:002010Age-dependent chromosomal distribution of male-biased genes in Drosophila.17114284Parmigiani RB, Bettoni F, Vibranovski MD, Lopes MH, Martins WK, Cunha IW, Soares FA, Simpson AJ, de Souza SJ, Camargo AAProceedings of the National Academy of Sciences of the United States of AmericaCharacterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. Proc Natl Acad Sci U S A. 2006 Nov 28; 103(48):18066-71.Proc Natl Acad Sci U S A2006-11-17T00:00:002006Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients.21551137Zhang YE, Vibranovski MD, Krinsky BH, Long MBioinformatics (Oxford, England)A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Bioinformatics. 2011 Jul 01; 27(13):1749-53.Bioinformatics2011-05-05T00:00:002011A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes.19251740Vibranovski MD, Zhang Y, Long MGenome researchGeneral gene movement off the X chromosome in the Drosophila genus. Genome Res. 2009 May; 19(5):897-903.Genome Res2009-02-27T00:00:002009General gene movement off the X chromosome in the Drosophila genus.21546357Chen ZX, Zhang YE, Vibranovski M, Luo J, Gao G, Long MMolecular biology and evolutionDeficiency of X-linked inverted duplicates with male-biased expression and the underlying evolutionary mechanisms in the Drosophila genome. Mol Biol Evol. 2011 Oct; 28(10):2823-32.Mol Biol Evol2011-05-05T00:00:002011Deficiency of X-linked inverted duplicates with male-biased expression and the underlying evolutionary mechanisms in the Drosophila genome.21779328Chen M, Zou M, Fu B, Li X, Vibranovski MD, Gan X, Wang D, Wang W, Long M, He SPloS oneEvolutionary patterns of RNA-based duplication in non-mammalian chordates. PLoS One. 2011; 6(7):e21466.PLoS One2011-07-11T00:00:002011Evolutionary patterns of RNA-based duplication in non-mammalian chordates.19936020Vibranovski MD, Lopes HF, Karr TL, Long MPLoS geneticsStage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes. PLoS Genet. 2009 Nov; 5(11):e1000731.PLoS Genet2009-11-20T00:00:002009Stage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes.22535494Wang J, Long M, Vibranovski MDJournal of molecular evolutionRetrogenes moved out of the z chromosome in the silkworm. J Mol Evol. 2012 Apr; 74(3-4):113-26.J Mol Evol2012-04-26T00:00:002012Retrogenes moved out of the z chromosome in the silkworm.Authorship 14759014Authorship 147678234184262Rodrigues MF, Vibranovski MD, Cogni REvolution; international journal of organic evolutionClinal and seasonal changes are correlated in Drosophila melanogaster natural populations. Evolution. 2021 08; 75(8):2042-2054.Evolution2021-07-09T00:00:002021Clinal and seasonal changes are correlated in Drosophila melanogaster natural populations.34242211Xia S, VanKuren NW, Chen C, Zhang L, Kemkemer C, Shao Y, Jia H, Lee U, Advani AS, Gschwend A, Vibranovski MD, Chen S, Zhang YE, Long MPLoS geneticsGenomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development. PLoS Genet. 2021 07; 17(7):e1009654.PLoS Genet2021-07-09T00:00:002021Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development.20610406Vibranovski MD, Chalopin DS, Lopes HF, Long M, Karr TLGeneticsDirect evidence for postmeiotic transcription during Drosophila melanogaster spermatogenesis. Genetics. 2010 Sep; 186(1):431-3.Genetics2010-07-06T00:00:002010Direct evidence for postmeiotic transcription during Drosophila melanogaster spermatogenesis.22691264Vibranovski MD, Zhang YE, Kemkemer C, Lopes HF, Karr TL, Long MBMC biologyRe-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome. BMC Biol. 2012 Jun 12; 10:49; author reply 50.BMC Biol2012-06-12T00:00:002012Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome.20957185Zhang YE, Vibranovski MD, Landback P, Marais GA, Long MPLoS biologyChromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome. PLoS Biol. 2010 Oct 05; 8(10).PLoS Biol2010-10-05T00:00:002010Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome.D019143Phenomena1868130.635601Evolution, Molecular18043753Havlioglu N, Wang J, Fushimi K, Vibranovski MD, Kan Z, Gish W, Fedorov A, Long M, Wu JYPloS oneAn intronic signal for alternative splicing in the human genome. PLoS One. 2007 Nov 28; 2(11):e1246.PLoS One2007-11-28T00:00:002007An intronic signal for alternative splicing in the human genome.22028629Zhang YE, Landback P, Vibranovski MD, Long MPLoS biologyAccelerated recruitment of new brain development genes into the human genome. PLoS Biol. 2011 Oct; 9(10):e1001179.PLoS Biol2011-10-18T00:00:002011Accelerated recruitment of new brain development genes into the human genome.23001763Zhang YE, Landback P, Vibranovski M, Long MBioEssays : news and reviews in molecular, cellular and developmental biologyNew genes expressed in human brains: implications for annotating evolving genomes. Bioessays. 2012 Nov; 34(11):982-91.Bioessays2012-09-24T00:00:002012New genes expressed in human brains: implications for annotating evolving genomes.16034650Vibranovski MD, Sakabe NJ, de Oliveira RS, de Souza SJJournal of molecular evolutionSigns of ancient and modern exon-shuffling are correlated to the distribution of ancient and modern domains along proteins. J Mol Evol. 2005 Sep; 61(3):341-50.J Mol Evol2005-07-18T00:00:002005Signs of ancient and modern exon-shuffling are correlated to the distribution of ancient and modern domains along proteins.22543869Chen S, Ni X, Krinsky BH, Zhang YE, Vibranovski MD, White KP, Long MThe EMBO journalReshaping of global gene expression networks and sex-biased gene expression by integration of a young gene. EMBO J. 2012 Jun 13; 31(12):2798-809.EMBO J2012-04-27T00:00:002012Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene.http://www.thorntonlab.orgThornton Lab websitehttp://manyuanlonglab.uchicago.edu/Long Lab Websitehttps://www.cureperiodpain.orgGyRLDr_Tu_gynesurgHuman GeneticsSurgeryUniversity of ChicagoDanielMatuteDaniel Matute41.78927490000000-87.601250000000001263Matute, DanielPostdoctoral Scholar37684690Mercuri RLV, Conceição HB, Guardia GDA, Goldstein G, Vibranovski MD, Hinske LC, Galante PAFMobile DNARetro-miRs: novel and functional miRNAs originating from mRNA retrotransposition. Mob DNA. 2023 Sep 08; 14(1):12.Mob DNA2023-09-08T00:00:002023Retro-miRs: novel and functional miRNAs originating from mRNA retrotransposition.Authorship 1662685TimotheeFlutreTimothee Flutre41.78927490000000-87.601250000000001553Flutre, TimotheePostdoctoral FellowJosephThorntonJoseph Thornton41.78927490000000-87.601250000000001722Thornton, JosephProfessorNoboruSakabeNoboru Sakabe41.78927490000000-87.601250000000001788Sakabe, NoboruYongZhangYong Zhang41.78927490000000-87.601250000000001951Zhang, YongJohnEbersoleJohn S. Ebersole41.78927490000000-87.601250000000001973Ebersole, JohnPROFESSORMartinKreitman2ml7DoF1GuTQkntjbwjr93A=Martin Kreitman41.78927490000000-87.601250000000002043Kreitman, MartinProfessorFrankTuFrank Tu41.78927490000000-87.601250000000002116Tu, FrankCLINICAL ASSOCIATE PROFESSOREric A.SchwartzEric A. Schwartz41.78927490000000-87.601250000000002156Schwartz, Eric A.Professor2.112380.00802738151research areas3.311080.2054583coauthor of80.48865.2040860similar to1135selected publicationsMarkTalamontiMark Talamonti41.78927490000000-87.601250000000002316Talamonti, MarkClinical ProfessorManyuanLongManyuan Long41.78927490000000-87.601250000000002617Long, ManyuanProfessortrue1true1true1true1PROFESSORPROFESSORtrue1ProfessorProfessortrue1ProfessorProfessortrue1ProfessorProfessortrue1Postdoctoral FellowPostdoctoral Fellowtrue1Postdoctoral ScholarPostdoctoral Scholartrue1CLINICAL ASSOCIATE PROFESSORCLINICAL ASSOCIATE PROFESSORtrue1ProfessorProfessortrue1PROFESSORPROFESSORtrue1Clinical ProfessorClinical ProfessorAuthorship 713242Authorship 728352Authorship 751591Authorship 79098425031657VanKuren NW, Vibranovski MDJournal of genomicsA novel dataset for identifying sex-biased genes in Drosophila. J Genomics. 2014; 2:64-7.J Genomics2014-03-10T00:00:002014A novel dataset for identifying sex-biased genes in Drosophila.25057326Vibranovski MDJournal of genomicsMeiotic sex chromosome inactivation in Drosophila. J Genomics. 2014; 2:104-17.J Genomics2014-06-01T00:00:002014Meiotic sex chromosome inactivation in Drosophila.24050177Long M, VanKuren NW, Chen S, Vibranovski MDAnnual review of geneticsNew gene evolution: little did we know. Annu Rev Genet. 2013; 47:307-33.Annu Rev Genet2013-09-13T00:00:002013New gene evolution: little did we know.24407956Gao G, Vibranovski MD, Zhang L, Li Z, Liu M, Zhang YE, Li X, Zhang W, Fan Q, VanKuren NW, Long M, Wei LGenome researchA long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster. Genome Res. 2014 04; 24(4):629-38.Genome Res2014-01-09T00:00:002014A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster.1010BSD-NeurologyChicago60637ILAuthorship 89049227109497França GS, Vibranovski MD, Galante PANature communicationsHost gene constraints and genomic context impact the expression and evolution of human microRNAs. Nat Commun. 2016 04 25; 7:11438.Nat Commun2016-04-25T00:00:002016Host gene constraints and genomic context impact the expression and evolution of human microRNAs.Statistics JohnReinitzxWdgBagBA8zMknJtY0fp/Cv/+94=John Reinitz0.000000000000000.000000000000002831Reinitz, JohnPROFESSORAuthorship 60248122950647Vibranovski MD, Zhang YE, Kemkemer C, VanKuren NW, Lopes HF, Karr TL, Long MBMC evolutionary biologySegmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes. BMC Evol Biol. 2012 Sep 05; 12:169.BMC Evol Biol2012-09-05T00:00:002012Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes.