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Connection

Phoebe Rice to DNA

This is a "connection" page, showing publications Phoebe Rice has written about DNA.
Connection Strength

4.489
DNA
  1. Structural basis for topological regulation of Tn3 resolvase. Nucleic Acids Res. 2023 02 22; 51(3):1001-1018.
    View in: PubMed
    Score: 0.520
  2. A new twist on V(D)J recombination. Nat Struct Mol Biol. 2018 08; 25(8):648-649.
    View in: PubMed
    Score: 0.379
  3. Target DNA bending by the Mu transpososome promotes careful transposition and prevents its reversal. Elife. 2017 02 13; 6.
    View in: PubMed
    Score: 0.342
  4. Serine Resolvases. Microbiol Spectr. 2015 Apr; 3(2):MDNA3-0045-2014.
    View in: PubMed
    Score: 0.301
  5. Moving DNA around: DNA transposition and retroviral integration. Curr Opin Struct Biol. 2011 Jun; 21(3):370-8.
    View in: PubMed
    Score: 0.227
  6. Sin resolvase catalytic activity and oligomerization state are tightly coupled. J Mol Biol. 2010 Nov 19; 404(1):16-33.
    View in: PubMed
    Score: 0.220
  7. Architecture of a serine recombinase-DNA regulatory complex. Mol Cell. 2008 Apr 25; 30(2):145-55.
    View in: PubMed
    Score: 0.186
  8. Structure-based analysis of HU-DNA binding. J Mol Biol. 2007 Jan 26; 365(4):1005-16.
    View in: PubMed
    Score: 0.167
  9. Mechanisms of site-specific recombination. Annu Rev Biochem. 2006; 75:567-605.
    View in: PubMed
    Score: 0.158
  10. Resolving integral questions in site-specific recombination. Nat Struct Mol Biol. 2005 Aug; 12(8):641-3.
    View in: PubMed
    Score: 0.154
  11. Visualizing Mu transposition: assembling the puzzle pieces. Genes Dev. 2005 Apr 01; 19(7):773-5.
    View in: PubMed
    Score: 0.150
  12. IHF and HU: flexible architects of bent DNA. Curr Opin Struct Biol. 2004 Feb; 14(1):28-35.
    View in: PubMed
    Score: 0.139
  13. Flexible DNA bending in HU-DNA cocrystal structures. EMBO J. 2003 Jul 15; 22(14):3749-60.
    View in: PubMed
    Score: 0.133
  14. Structural plasticity of the Flp-Holliday junction complex. J Mol Biol. 2003 Feb 14; 326(2):425-34.
    View in: PubMed
    Score: 0.130
  15. New insight into site-specific recombination from Flp recombinase-DNA structures. Annu Rev Biophys Biomol Struct. 2003; 32:135-59.
    View in: PubMed
    Score: 0.130
  16. Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping. Mol Cell. 2000 Oct; 6(4):885-97.
    View in: PubMed
    Score: 0.110
  17. Structure of the P element transpososome reveals new twists on the DD(E/D) theme. Nat Struct Mol Biol. 2019 11; 26(11):989-990.
    View in: PubMed
    Score: 0.103
  18. Holding damaged DNA together. Nat Struct Biol. 1999 Sep; 6(9):805-6.
    View in: PubMed
    Score: 0.102
  19. Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically 13C- and 15N-Labeled DNA. Biochemistry. 2019 04 16; 58(15):1963-1974.
    View in: PubMed
    Score: 0.099
  20. Static Kinks or Flexible Hinges: Multiple Conformations of Bent DNA Bound to Integration Host Factor Revealed by Fluorescence Lifetime Measurements. J Phys Chem B. 2018 12 13; 122(49):11519-11534.
    View in: PubMed
    Score: 0.096
  21. Two-step interrogation then recognition of DNA binding site by Integration Host Factor: an architectural DNA-bending protein. Nucleic Acids Res. 2018 02 28; 46(4):1741-1755.
    View in: PubMed
    Score: 0.092
  22. Making DNA do a U-turn: IHF and related proteins. Curr Opin Struct Biol. 1997 Feb; 7(1):86-93.
    View in: PubMed
    Score: 0.085
  23. Global analysis of ion dependence unveils hidden steps in DNA binding and bending by integration host factor. J Chem Phys. 2013 Sep 28; 139(12):121927.
    View in: PubMed
    Score: 0.068
  24. Mapping the transition state for DNA bending by IHF. J Mol Biol. 2012 May 18; 418(5):300-15.
    View in: PubMed
    Score: 0.061
  25. Orchestrating serine resolvases. Biochem Soc Trans. 2010 Apr; 38(2):384-7.
    View in: PubMed
    Score: 0.053
  26. Protein binding has a large effect on radical mediated DNA damage. J Am Chem Soc. 2008 Oct 01; 130(39):12890-1.
    View in: PubMed
    Score: 0.048
  27. Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA. Nature. 2008 Apr 24; 452(7190):961-5.
    View in: PubMed
    Score: 0.046
  28. Amino acid residues in Rag1 crucial for DNA hairpin formation. Nat Struct Mol Biol. 2006 Nov; 13(11):1010-5.
    View in: PubMed
    Score: 0.042
  29. The structure of the human AGT protein bound to DNA and its implications for damage detection. J Mol Biol. 2005 Jul 22; 350(4):657-66.
    View in: PubMed
    Score: 0.038
  30. Crystal structure of a Rad51 filament. Nat Struct Mol Biol. 2004 Aug; 11(8):791-6.
    View in: PubMed
    Score: 0.036
  31. Comparative architecture of transposase and integrase complexes. Nat Struct Biol. 2001 May; 8(5):302-7.
    View in: PubMed
    Score: 0.029
  32. Retroviral integrases and their cousins. Curr Opin Struct Biol. 1996 Feb; 6(1):76-83.
    View in: PubMed
    Score: 0.020
  33. Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits. EMBO J. 1994 Apr 01; 13(7):1514-24.
    View in: PubMed
    Score: 0.018
  34. Structural basis of asymmetry in the human immunodeficiency virus type 1 reverse transcriptase heterodimer. Proc Natl Acad Sci U S A. 1994 Jul 19; 91(15):7242-6.
    View in: PubMed
    Score: 0.004
  35. The crystal structure of the catalytic domain of the site-specific recombination enzyme gamma delta resolvase at 2.7 A resolution. Cell. 1990 Dec 21; 63(6):1323-9.
    View in: PubMed
    Score: 0.003
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.