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Connection

Yusuke Nakamura to Base Sequence

This is a "connection" page, showing publications Yusuke Nakamura has written about Base Sequence.
Connection Strength

1.317
  1. Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2. J Hum Genet. 2020 Jul; 65(7):569-575.
    View in: PubMed
    Score: 0.139
  2. Downregulation of the tumor suppressor HSPB7, involved in the p53 pathway, in renal cell carcinoma by hypermethylation. Int J Oncol. 2014 May; 44(5):1490-8.
    View in: PubMed
    Score: 0.091
  3. A single nucleotide polymorphism within the acetyl-coenzyme A carboxylase beta gene is associated with proteinuria in patients with type 2 diabetes. PLoS Genet. 2010 Feb 12; 6(2):e1000842.
    View in: PubMed
    Score: 0.068
  4. A variable number of tandem repeats polymorphism in an E2F-1 binding element in the 5' flanking region of SMYD3 is a risk factor for human cancers. Nat Genet. 2005 Oct; 37(10):1104-7.
    View in: PubMed
    Score: 0.050
  5. Genetic variations in the gene encoding TFAP2B are associated with type 2 diabetes mellitus. J Hum Genet. 2005; 50(6):283-292.
    View in: PubMed
    Score: 0.049
  6. Fine-scale SNP map of an 11-kb genomic region at 22q13.1 containing the galectin-1 gene. J Hum Genet. 2005; 50(1):42-45.
    View in: PubMed
    Score: 0.048
  7. Comparison of gene-expression profiles between diffuse- and intestinal-type gastric cancers using a genome-wide cDNA microarray. Oncogene. 2004 Sep 02; 23(40):6830-44.
    View in: PubMed
    Score: 0.047
  8. Identification of PDZK4, a novel human gene with PDZ domains, that is upregulated in synovial sarcomas. Oncogene. 2004 Jul 15; 23(32):5551-7.
    View in: PubMed
    Score: 0.047
  9. Methylation at CpG islands in intron 1 of EGR2 confers enhancer-like activity. FEBS Lett. 2003 Nov 06; 554(1-2):67-72.
    View in: PubMed
    Score: 0.044
  10. High-density SNP map of human ITR, a gene associated with vascular remodeling. J Hum Genet. 2003; 48(4):170-2.
    View in: PubMed
    Score: 0.042
  11. Identification of CRYM as a candidate responsible for nonsyndromic deafness, through cDNA microarray analysis of human cochlear and vestibular tissues. Am J Hum Genet. 2003 Jan; 72(1):73-82.
    View in: PubMed
    Score: 0.042
  12. Molecular diagnosis of colorectal tumors by expression profiles of 50 genes expressed differentially in adenomas and carcinomas. Oncogene. 2002 Jun 13; 21(26):4120-8.
    View in: PubMed
    Score: 0.040
  13. Diagnostic evaluation of RNA sequencing for the detection of genetic abnormalities associated with Ph-like acute lymphoblastic leukemia (ALL). Leuk Lymphoma. 2017 04; 58(4):950-958.
    View in: PubMed
    Score: 0.027
  14. Cystatin C as a p53-inducible apoptotic mediator that regulates cathepsin L activity. Cancer Sci. 2016 Mar; 107(3):298-306.
    View in: PubMed
    Score: 0.026
  15. Overexpression of cohesion establishment factor DSCC1 through E2F in colorectal cancer. PLoS One. 2014; 9(1):e85750.
    View in: PubMed
    Score: 0.022
  16. TSPYL5 SNPs: association with plasma estradiol concentrations and aromatase expression. Mol Endocrinol. 2013 Apr; 27(4):657-70.
    View in: PubMed
    Score: 0.021
  17. Integration of mouse and human genome-wide association data identifies KCNIP4 as an asthma gene. PLoS One. 2013; 8(2):e56179.
    View in: PubMed
    Score: 0.021
  18. Common variants at 11q12, 10q26 and 3p11.2 are associated with prostate cancer susceptibility in Japanese. Nat Genet. 2012 Feb 26; 44(4):426-9, S1.
    View in: PubMed
    Score: 0.020
  19. IRX4 at 5p15 suppresses prostate cancer growth through the interaction with vitamin D receptor, conferring prostate cancer susceptibility. Hum Mol Genet. 2012 May 01; 21(9):2076-85.
    View in: PubMed
    Score: 0.020
  20. Common variants in a novel gene, FONG on chromosome 2q33.1 confer risk of osteoporosis in Japanese. PLoS One. 2011 May 06; 6(5):e19641.
    View in: PubMed
    Score: 0.019
  21. Common variation in GPC5 is associated with acquired nephrotic syndrome. Nat Genet. 2011 May; 43(5):459-63.
    View in: PubMed
    Score: 0.018
  22. Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing. Nat Genet. 2010 Nov; 42(11):931-6.
    View in: PubMed
    Score: 0.018
  23. Development of new HLA-B*3505 genotyping method using Invader assay. Pharmacogenet Genomics. 2010 Oct; 20(10):630-3.
    View in: PubMed
    Score: 0.018
  24. Identification of SPARC as a candidate target antigen for immunotherapy of various cancers. Int J Cancer. 2010 Sep 01; 127(6):1393-403.
    View in: PubMed
    Score: 0.018
  25. Differential quantification of CYP2D6 gene copy number by four different quantitative real-time PCR assays. Pharmacogenet Genomics. 2010 Jul; 20(7):451-4.
    View in: PubMed
    Score: 0.018
  26. Common variation of IL28 affects gamma-GTP levels and inflammation of the liver in chronically infected hepatitis C virus patients. J Hepatol. 2010 Sep; 53(3):439-43.
    View in: PubMed
    Score: 0.017
  27. Independent and population-specific association of risk variants at the IRGM locus with Crohn's disease. Hum Mol Genet. 2010 May 01; 19(9):1828-39.
    View in: PubMed
    Score: 0.017
  28. Criterion values for multiplex SNP genotyping by the invader assay. Forensic Sci Int Genet. 2010 Feb; 4(2):130-6.
    View in: PubMed
    Score: 0.017
  29. Determination of splice-site mutations in Lynch syndrome (hereditary non-polyposis colorectal cancer) patients using functional splicing assay. Fam Cancer. 2009; 8(4):509-17.
    View in: PubMed
    Score: 0.017
  30. HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres. Cell. 2009 May 01; 137(3):485-97.
    View in: PubMed
    Score: 0.016
  31. Involvement of epithelial cell transforming sequence-2 oncoantigen in lung and esophageal cancer progression. Clin Cancer Res. 2009 Jan 01; 15(1):256-66.
    View in: PubMed
    Score: 0.016
  32. Activation of Holliday junction recognizing protein involved in the chromosomal stability and immortality of cancer cells. Cancer Res. 2007 Sep 15; 67(18):8544-53.
    View in: PubMed
    Score: 0.014
  33. Nucleobindin 1 controls the unfolded protein response by inhibiting ATF6 activation. J Biol Chem. 2007 Oct 05; 282(40):29264-72.
    View in: PubMed
    Score: 0.014
  34. Polymorphisms in the 3' UTR in the neurocalcin delta gene affect mRNA stability, and confer susceptibility to diabetic nephropathy. Hum Genet. 2007 Nov; 122(3-4):397-407.
    View in: PubMed
    Score: 0.014
  35. Expression of novel molecules, MICAL2-PV (MICAL2 prostate cancer variants), increases with high Gleason score and prostate cancer progression. Clin Cancer Res. 2006 May 01; 12(9):2767-73.
    View in: PubMed
    Score: 0.013
  36. Functional haplotypes of IL-12B are associated with childhood atopic asthma. J Allergy Clin Immunol. 2005 Oct; 116(4):789-95.
    View in: PubMed
    Score: 0.013
  37. Mutated G-protein-coupled receptor GPR10 is responsible for the hyperphagia/dyslipidaemia/obesity locus of Dmo1 in the OLETF rat. Clin Exp Pharmacol Physiol. 2005 May-Jun; 32(5-6):355-66.
    View in: PubMed
    Score: 0.012
  38. Genetic variations in the gene encoding ELMO1 are associated with susceptibility to diabetic nephropathy. Diabetes. 2005 Apr; 54(4):1171-8.
    View in: PubMed
    Score: 0.012
  39. Isolation and characterization of a novel gene CLUAP1 whose expression is frequently upregulated in colon cancer. Oncogene. 2004 Dec 09; 23(57):9289-94.
    View in: PubMed
    Score: 0.012
  40. DKK1, a negative regulator of Wnt signaling, is a target of the beta-catenin/TCF pathway. Oncogene. 2004 Nov 04; 23(52):8520-6.
    View in: PubMed
    Score: 0.012
  41. Association of the gene encoding wingless-type mammary tumor virus integration-site family member 5B (WNT5B) with type 2 diabetes. Am J Hum Genet. 2004 Nov; 75(5):832-43.
    View in: PubMed
    Score: 0.012
  42. Identification of the interleukin 4 receptor alpha gene as a direct target for p73. Cancer Res. 2003 Dec 01; 63(23):8145-52.
    View in: PubMed
    Score: 0.011
  43. Association of solute carrier family 12 (sodium/chloride) member 3 with diabetic nephropathy, identified by genome-wide analyses of single nucleotide polymorphisms. Diabetes. 2003 Nov; 52(11):2848-53.
    View in: PubMed
    Score: 0.011
  44. Glypican-3, overexpressed specifically in human hepatocellular carcinoma, is a novel tumor marker. Biochem Biophys Res Commun. 2003 Jun 20; 306(1):16-25.
    View in: PubMed
    Score: 0.011
  45. hCDC4b, a regulator of cyclin E, as a direct transcriptional target of p53. Cancer Sci. 2003 May; 94(5):431-6.
    View in: PubMed
    Score: 0.011
  46. p53RDL1 regulates p53-dependent apoptosis. Nat Cell Biol. 2003 Mar; 5(3):216-23.
    View in: PubMed
    Score: 0.011
  47. Inhibition of experimental intimal thickening in mice lacking a novel G-protein-coupled receptor. Circulation. 2003 Jan 21; 107(2):313-9.
    View in: PubMed
    Score: 0.010
  48. The Id2 gene is a novel target of transcriptional activation by EWS-ETS fusion proteins in Ewing family tumors. Oncogene. 2002 Nov 28; 21(54):8302-9.
    View in: PubMed
    Score: 0.010
  49. The Xq22 inversion breakpoint interrupted a novel Ras-like GTPase gene in a patient with Duchenne muscular dystrophy and profound mental retardation. Am J Hum Genet. 2002 Sep; 71(3):637-45.
    View in: PubMed
    Score: 0.010
  50. Cyclin K as a direct transcriptional target of the p53 tumor suppressor. Neoplasia. 2002 May-Jun; 4(3):268-74.
    View in: PubMed
    Score: 0.010
  51. Identification of semaphorin3B as a direct target of p53. Neoplasia. 2002 Jan-Feb; 4(1):82-7.
    View in: PubMed
    Score: 0.010
  52. Characterization of a VNTR polymorphism in the coding region of the CEL gene. J Hum Genet. 2002; 47(4):213-5.
    View in: PubMed
    Score: 0.010
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.