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Inference of population history using coalescent HMMs: review and outlook.
POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.
The Effects of Population Size Histories on Estimates of Selection Coefficients from Time-Series Genetic Data.
An accurate sequentially Markov conditional sampling distribution for the coalescent with recombination.
Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans.
SpectralTDF: transition densities of diffusion processes with time-varying selection parameters, mutation rates and effective population sizes.
Transition Densities and Sample Frequency Spectra of Diffusion Processes with Selection and Variable Population Size.
Model-based detection and analysis of introgressed Neanderthal ancestry in modern humans.
A simple method for finding explicit analytic transition densities of diffusion processes with general diploid selection.
Importance sampling for Lambda-coalescents in the infinitely many sites model.