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Brent Doiron

AddressChicago IL 60637
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Doiron B, Lengyel M. Editorial overview: Computational neuroscience. Curr Opin Neurobiol. 2019 10; 58:iii-vii. PMID: 31635940.
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    2. Linaro D, Ocker GK, Doiron B, Giugliano M. Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. J Neurosci. 2019 09 25; 39(39):7648-7663. PMID: 31346031.
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    3. Ocker GK, Doiron B. Training and Spontaneous Reinforcement of Neuronal Assemblies by Spike Timing Plasticity. Cereb Cortex. 2019 03 01; 29(3):937-951. PMID: 29415191.
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    4. Williamson RC, Doiron B, Smith MA, Yu BM. Bridging large-scale neuronal recordings and large-scale network models using dimensionality reduction. Curr Opin Neurobiol. 2019 04; 55:40-47. PMID: 30677702.
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    5. Huang C, Ruff DA, Pyle R, Rosenbaum R, Cohen MR, Doiron B. Circuit Models of Low-Dimensional Shared Variability in Cortical Networks. Neuron. 2019 01 16; 101(2):337-348.e4. PMID: 30581012.
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    6. Kass RE, Amari SI, Arai K, Brown EN, Diekman CO, Diesmann M, Doiron B, Eden UT, Fairhall AL, Fiddyment GM, Fukai T, Grün S, Harrison MT, Helias M, Nakahara H, Teramae JN, Thomas PJ, Reimers M, Rodu J, Rotstein HG, Shea-Brown E, Shimazaki H, Shinomoto S, Yu BM, Kramer MA. Computational Neuroscience: Mathematical and Statistical Perspectives. Annu Rev Stat Appl. 2018 Mar; 5:183-214. PMID: 30976604.
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    7. Ocker GK, Hu Y, Buice MA, Doiron B, Josic K, Rosenbaum R, Shea-Brown E. From the statistics of connectivity to the statistics of spike times in neuronal networks. Curr Opin Neurobiol. 2017 10; 46:109-119. PMID: 28863386.
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    8. Bittner SR, Williamson RC, Snyder AC, Litwin-Kumar A, Doiron B, Chase SM, Smith MA, Yu BM. Population activity structure of excitatory and inhibitory neurons. PLoS One. 2017; 12(8):e0181773. PMID: 28817581.
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    9. Huang C, Doiron B. Once upon a (slow) time in the land of recurrent neuronal networks…. Curr Opin Neurobiol. 2017 10; 46:31-38. PMID: 28756341.
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    10. Kanashiro T, Ocker GK, Cohen MR, Doiron B. Attentional modulation of neuronal variability in circuit models of cortex. Elife. 2017 06 07; 6. PMID: 28590902.
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    11. Ly C, Doiron B. Noise-enhanced coding in phasic neuron spike trains. PLoS One. 2017; 12(5):e0176963. PMID: 28472143.
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    12. Keck T, Toyoizumi T, Chen L, Doiron B, Feldman DE, Fox K, Gerstner W, Haydon PG, Hübener M, Lee HK, Lisman JE, Rose T, Sengpiel F, Stellwagen D, Stryker MP, Turrigiano GG, van Rossum MC. Integrating Hebbian and homeostatic plasticity: the current state of the field and future research directions. Philos Trans R Soc Lond B Biol Sci. 2017 03 05; 372(1715). PMID: 28093552.
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    13. Williamson RC, Cowley BR, Litwin-Kumar A, Doiron B, Kohn A, Smith MA, Yu BM. Scaling Properties of Dimensionality Reduction for Neural Populations and Network Models. PLoS Comput Biol. 2016 12; 12(12):e1005141. PMID: 27926936.
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    14. Rosenbaum R, Smith MA, Kohn A, Rubin JE, Doiron B. The spatial structure of correlated neuronal variability. Nat Neurosci. 2017 01; 20(1):107-114. PMID: 27798630.
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    15. Doiron B, Litwin-Kumar A, Rosenbaum R, Ocker GK, Josic K. The mechanics of state-dependent neural correlations. Nat Neurosci. 2016 Mar; 19(3):383-93. PMID: 26906505.
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    16. Litwin-Kumar A, Rosenbaum R, Doiron B. Inhibitory stabilization and visual coding in cortical circuits with multiple interneuron subtypes. J Neurophysiol. 2016 Mar; 115(3):1399-409. PMID: 26740531.
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    17. Ocker GK, Litwin-Kumar A, Doiron B. Self-Organization of Microcircuits in Networks of Spiking Neurons with Plastic Synapses. PLoS Comput Biol. 2015 Aug; 11(8):e1004458. PMID: 26291697.
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    18. Litwin-Kumar A, Doiron B. Formation and maintenance of neuronal assemblies through synaptic plasticity. Nat Commun. 2014 Nov 14; 5:5319. PMID: 25395015.
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    19. Doiron B, Litwin-Kumar A. Balanced neural architecture and the idling brain. Front Comput Neurosci. 2014; 8:56. PMID: 24904394.
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    20. Ocker GK, Doiron B. Kv7 channels regulate pairwise spiking covariability in health and disease. J Neurophysiol. 2014 Jul 15; 112(2):340-52. PMID: 24790164.
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    21. Kilpatrick ZP, Ermentrout B, Doiron B. Optimizing working memory with heterogeneity of recurrent cortical excitation. J Neurosci. 2013 Nov 27; 33(48):18999-9011. PMID: 24285904.
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    22. Rosenbaum R, Zimnik A, Zheng F, Turner RS, Alzheimer C, Doiron B, Rubin JE. Axonal and synaptic failure suppress the transfer of firing rate oscillations, synchrony and information during high frequency deep brain stimulation. Neurobiol Dis. 2014 Feb; 62:86-99. PMID: 24051279.
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    23. Rosenbaum R, Rubin JE, Doiron B. Short-term synaptic depression and stochastic vesicle dynamics reduce and shape neuronal correlations. J Neurophysiol. 2013 Jan; 109(2):475-84. PMID: 23114215.
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    24. Litwin-Kumar A, Doiron B. Slow dynamics and high variability in balanced cortical networks with clustered connections. Nat Neurosci. 2012 Nov; 15(11):1498-505. PMID: 23001062.
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    25. Litwin-Kumar A, Chacron MJ, Doiron B. The spatial structure of stimuli shapes the timescale of correlations in population spiking activity. PLoS Comput Biol. 2012; 8(9):e1002667. PMID: 23028274.
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    26. Rosenbaum R, Rubin J, Doiron B. Short term synaptic depression imposes a frequency dependent filter on synaptic information transfer. PLoS Comput Biol. 2012; 8(6):e1002557. PMID: 22737062.
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    27. Polk A, Litwin-Kumar A, Doiron B. Correlated neural variability in persistent state networks. Proc Natl Acad Sci U S A. 2012 Apr 17; 109(16):6295-300. PMID: 22474377.
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    28. Ly C, Middleton JW, Doiron B. Cellular and circuit mechanisms maintain low spike co-variability and enhance population coding in somatosensory cortex. Front Comput Neurosci. 2012; 6:7. PMID: 22408615.
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    29. Leao RM, Li S, Doiron B, Tzounopoulos T. Diverse levels of an inwardly rectifying potassium conductance generate heterogeneous neuronal behavior in a population of dorsal cochlear nucleus pyramidal neurons. J Neurophysiol. 2012 Jun; 107(11):3008-19. PMID: 22378165.
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    30. Middleton JW, Omar C, Doiron B, Simons DJ. Neural correlation is stimulus modulated by feedforward inhibitory circuitry. J Neurosci. 2012 Jan 11; 32(2):506-18. PMID: 22238086.
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    31. Litwin-Kumar A, Oswald AM, Urban NN, Doiron B. Balanced synaptic input shapes the correlation between neural spike trains. PLoS Comput Biol. 2011 Dec; 7(12):e1002305. PMID: 22215995.
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    32. Reitsma P, Doiron B, Rubin J. Correlation transfer from basal ganglia to thalamus in Parkinson's disease. Front Comput Neurosci. 2011; 5:58. PMID: 22355287.
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    33. Doiron B, Zhao Y, Tzounopoulos T. Combined LTP and LTD of modulatory inputs controls neuronal processing of primary sensory inputs. J Neurosci. 2011 Jul 20; 31(29):10579-92. PMID: 21775602.
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    34. Giridhar S, Doiron B, Urban NN. Timescale-dependent shaping of correlation by olfactory bulb lateral inhibition. Proc Natl Acad Sci U S A. 2011 Apr 05; 108(14):5843-8. PMID: 21436050.
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    35. Tabone M, Ermentrout B, Doiron B. Balancing organization and flexibility in foraging dynamics. J Theor Biol. 2010 Oct 07; 266(3):391-400. PMID: 20627107.
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    36. Gai Y, Doiron B, Rinzel J. Slope-based stochastic resonance: how noise enables phasic neurons to encode slow signals. PLoS Comput Biol. 2010 Jun 24; 6(6):e1000825. PMID: 20585612.
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    37. Gai Y, Doiron B, Kotak V, Rinzel J. Noise-gated encoding of slow inputs by auditory brain stem neurons with a low-threshold K+ current. J Neurophysiol. 2009 Dec; 102(6):3447-60. PMID: 19812289.
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    38. Josic K, Shea-Brown E, Doiron B, de la Rocha J. Stimulus-dependent correlations and population codes. Neural Comput. 2009 Oct; 21(10):2774-804. PMID: 19635014.
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    39. Oswald AM, Doiron B, Rinzel J, Reyes AD. Spatial profile and differential recruitment of GABAB modulate oscillatory activity in auditory cortex. J Neurosci. 2009 Aug 19; 29(33):10321-34. PMID: 19692606.
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    40. Ly C, Doiron B. Divisive gain modulation with dynamic stimuli in integrate-and-fire neurons. PLoS Comput Biol. 2009 Apr; 5(4):e1000365. PMID: 19390603.
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    41. Sutherland C, Doiron B, Longtin A. Feedback-induced gain control in stochastic spiking networks. Biol Cybern. 2009 Jun; 100(6):475-89. PMID: 19259695.
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    42. Mehaffey WH, Fernandez FR, Doiron B, Turner RW. Regulation of somatic firing dynamics by backpropagating dendritic spikes. J Physiol Paris. 2008 Jul-Nov; 102(4-6):181-94. PMID: 18984047.
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    43. Shea-Brown E, Josic K, de la Rocha J, Doiron B. Correlation and synchrony transfer in integrate-and-fire neurons: basic properties and consequences for coding. Phys Rev Lett. 2008 Mar 14; 100(10):108102. PMID: 18352234.
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    44. Day ML, Doiron B, Rinzel J. Subthreshold K+ channel dynamics interact with stimulus spectrum to influence temporal coding in an auditory brain stem model. J Neurophysiol. 2008 Feb; 99(2):534-44. PMID: 18057115.
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    45. Masuda N, Doiron B. Gamma oscillations of spiking neural populations enhance signal discrimination. PLoS Comput Biol. 2007 Nov; 3(11):e236. PMID: 18052541.
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    46. de la Rocha J, Doiron B, Shea-Brown E, Josic K, Reyes A. Correlation between neural spike trains increases with firing rate. Nature. 2007 Aug 16; 448(7155):802-6. PMID: 17700699.
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    47. Doiron B, Oswald AM, Maler L. Interval coding. II. Dendrite-dependent mechanisms. J Neurophysiol. 2007 Apr; 97(4):2744-57. PMID: 17409177.
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    48. Oswald AM, Doiron B, Maler L. Interval coding. I. Burst interspike intervals as indicators of stimulus intensity. J Neurophysiol. 2007 Apr; 97(4):2731-43. PMID: 17409176.
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    49. Coombes S, Doiron B, Josic K, Shea-Brown E. Towards blueprints for network architecture, biophysical dynamics and signal transduction. Philos Trans A Math Phys Eng Sci. 2006 Dec 15; 364(1849):3301-18. PMID: 17090461.
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    50. Doiron B, Rinzel J, Reyes A. Stochastic synchronization in finite size spiking networks. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Sep; 74(3 Pt 1):030903. PMID: 17025585.
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    51. Lindner B, Doiron B, Longtin A. Theory of oscillatory firing induced by spatially correlated noise and delayed inhibitory feedback. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Dec; 72(6 Pt 1):061919. PMID: 16485986.
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    52. Mehaffey WH, Doiron B, Maler L, Turner RW. Deterministic multiplicative gain control with active dendrites. J Neurosci. 2005 Oct 26; 25(43):9968-77. PMID: 16251445.
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    53. Masuda N, Doiron B, Longtin A, Aihara K. Coding of temporally varying signals in networks of spiking neurons with global delayed feedback. Neural Comput. 2005 Oct; 17(10):2139-75. PMID: 16105221.
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    54. Doiron B, Lindner B, Longtin A, Maler L, Bastian J. Oscillatory activity in electrosensory neurons increases with the spatial correlation of the stochastic input stimulus. Phys Rev Lett. 2004 Jul 23; 93(4):048101. PMID: 15323795.
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    55. Oswald AM, Chacron MJ, Doiron B, Bastian J, Maler L. Parallel processing of sensory input by bursts and isolated spikes. J Neurosci. 2004 May 05; 24(18):4351-62. PMID: 15128849.
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    56. Chacron MJ, Doiron B, Maler L, Longtin A, Bastian J. Non-classical receptive field mediates switch in a sensory neuron's frequency tuning. Nature. 2003 May 01; 423(6935):77-81. PMID: 12721628.
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    57. Laing CR, Doiron B, Longtin A, Noonan L, Turner RW, Maler L. Type I burst excitability. J Comput Neurosci. 2003 May-Jun; 14(3):329-42. PMID: 12766431.
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    58. Noonan L, Doiron B, Laing C, Longtin A, Turner RW. A dynamic dendritic refractory period regulates burst discharge in the electrosensory lobe of weakly electric fish. J Neurosci. 2003 Feb 15; 23(4):1524-34. PMID: 12598641.
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    59. Doiron B, Chacron MJ, Maler L, Longtin A, Bastian J. Inhibitory feedback required for network oscillatory responses to communication but not prey stimuli. Nature. 2003 Jan 30; 421(6922):539-43. PMID: 12556894.
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    60. Doiron B, Noonan L, Lemon N, Turner RW. Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. J Neurophysiol. 2003 Jan; 89(1):324-37. PMID: 12522183.
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    61. Longtin A, Doiron B, Bulsara AR. Noise-induced divisive gain control in neuron models. Biosystems. 2002 Oct-Dec; 67(1-3):147-56. PMID: 12459294.
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    62. Turner RW, Lemon N, Doiron B, Rashid AJ, Morales E, Longtin A, Maler L, Dunn RJ. Oscillatory burst discharge generated through conditional backpropagation of dendritic spikes. J Physiol Paris. 2002 Sep-Dec; 96(5-6):517-30. PMID: 14692499.
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    63. Doiron B, Laing C, Longtin A, Maler L. Ghostbursting: a novel neuronal burst mechanism. J Comput Neurosci. 2002 Jan-Feb; 12(1):5-25. PMID: 11932557.
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    64. Doiron B, Longtin A, Turner RW, Maler L. Model of gamma frequency burst discharge generated by conditional backpropagation. J Neurophysiol. 2001 Oct; 86(4):1523-45. PMID: 11600618.
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    65. Doiron B, Longtin A, Berman N, Maler L. Subtractive and divisive inhibition: effect of voltage-dependent inhibitory conductances and noise. Neural Comput. 2001 Jan; 13(1):227-48. PMID: 11177434.
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