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Jan-Marino Ramirez

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InstitutionUniversity of Chicago
AddressChicago IL 60637
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Bhagavan H, Wei AD, Oliveira LM, Aldinger KA, Ramirez JM. Chronic intermittent hypoxia elicits distinct transcriptomic responses among neurons and oligodendrocytes within the brainstem of mice. Am J Physiol Lung Cell Mol Physiol. 2024 Apr 09. PMID: 38591125.
      Citations:    
    2. Woods CB, Predoi B, Howe M, Reczek CR, Kayser EB, Ramirez JM, Morgan PG, Sedensky MM. Potassium Leak Channels and Mitochondrial Complex I Interact in Glutamatergic Interneurons of the Mouse Spinal Cord. Anesthesiology. 2024 Apr 01; 140(4):715-728. PMID: 38147628; PMCID: PMC10939847.
      Citations:    Fields:    Translation:AnimalsCells
    3. Huff A, Karlen-Amarante M, Oliveira LM, Ramirez JM, Huff AD, Karlen-Amarante M, Oliveira LM, Ramirez JM, Huff A, Oliveira LM, Ramirez JM. Chronic Intermittent Hypoxia reveals role of the Postinspiratory Complex in the mediation of normal swallow production. bioRxiv. 2024 Mar 13. PMID: 37808787; PMCID: PMC10557756.
      Citations:    
    4. Bush NE, Ramirez JM. Latent neural population dynamics underlying breathing, opioid-induced respiratory depression and gasping. Nat Neurosci. 2024 Feb; 27(2):259-271. PMID: 38182835; PMCID: PMC10849970.
      Citations:    Fields:    Translation:Humans
    5. Mich JK, Ryu J, Wei AD, Gore BB, Guo R, Bard AM, Martinez RA, Bishaw Y, Luber E, Oliveira Santos LM, Miranda N, Ramirez JM, Ting JT, Lein ES, Levi BP, Kalume FK. AAV-mediated interneuron-specific gene replacement for Dravet syndrome. bioRxiv. 2023 Dec 15. PMID: 38168178; PMCID: PMC10760176.
      Citations:    
    6. Bard AM, Clark LV, Cosgun E, Aldinger KA, Timms A, Quina LA, Lavista Ferres JM, Jardine D, Haas EA, Becker TM, Pagan CM, Santani A, Martinez D, Barua S, McNutt Z, Nesbitt A, Ramirez JM, Aldinger KA, Mitchell EA. Known pathogenic gene variants and new candidates detected in Sudden Unexpected Infant Death using Whole Genome Sequencing. medRxiv. 2023 Nov 29. PMID: 37745463; PMCID: PMC10516094.
      Citations:    
    7. Burgraff NJ, Baertsch NA, Ramirez JM. A comparative examination of morphine and fentanyl: unravelling the differential impacts on breathing and airway stability. J Physiol. 2023 10; 601(20):4625-4642. PMID: 37778015.
      Citations:    Fields:    Translation:Animals
    8. Severs LJ, Bush NE, Quina LA, Hidalgo-Andrade S, Burgraff NJ, Dashevskiy T, Shih AY, Baertsch NA, Ramirez JM. Purinergic signaling mediates neuroglial interactions to modulate sighs. Nat Commun. 2023 08 31; 14(1):5300. PMID: 37652903; PMCID: PMC10471608.
      Citations: 2     Fields:    Translation:AnimalsCells
    9. Ramirez JM, Carroll MS, Burgraff N, Rand CM, Weese-Mayer DE. A narrative review of the mechanisms and consequences of intermittent hypoxia and the role of advanced analytic techniques in pediatric autonomic disorders. Clin Auton Res. 2023 06; 33(3):287-300. PMID: 37326924.
      Citations:    Fields:    Translation:Humans
    10. Oliveira LM, Severs L, Moreira TS, Ramirez JM, Takakura AC. Ampakine CX614 increases respiratory rate in a mouse model of Parkinson's disease. Brain Res. 2023 09 15; 1815:148448. PMID: 37301422.
      Citations:    Fields:    Translation:AnimalsCells
    11. Huff A, Karlen-Amarante M, Oliveira LM, Ramirez JM. Role of the postinspiratory complex in regulating swallow-breathing coordination and other laryngeal behaviors. Elife. 2023 06 05; 12. PMID: 37272425; PMCID: PMC10264072.
      Citations: 2     Fields:    Translation:Animals
    12. Huff A, Karlen-Amarante M, Pitts T, Ramirez JM. Optogenetic stimulation of pre-Bötzinger complex reveals novel circuit interactions in swallowing-breathing coordination. Proc Natl Acad Sci U S A. 2022 07 19; 119(29):e2121095119. PMID: 35858334; PMCID: PMC9304034.
      Citations: 7     Fields:    Translation:AnimalsCells
    13. Burgraff NJ, Phillips RS, Severs LJ, Bush NE, Baertsch NA, Ramirez JM. Inspiratory rhythm generation is stabilized by Ih. J Neurophysiol. 2022 07 01; 128(1):181-196. PMID: 35675444; PMCID: PMC9291429.
      Citations: 1     Fields:    Translation:HumansCells
    14. Wei AD, Wakenight P, Zwingman TA, Bard AM, Sahai N, Willemsen MH, Schelhaas HJ, Stegmann APA, Verhoeven JS, de Man SA, Wessels MW, Kleefstra T, Shinde DN, Helbig KL, Basinger A, Wagner VF, Rodriguez-Buritica D, Bryant E, Millichap JJ, Millen KJ, Dobyns WB, Ramirez JM, Kalume FK. Human KCNQ5 de novo mutations underlie epilepsy and intellectual disability. J Neurophysiol. 2022 07 01; 128(1):40-61. PMID: 35583973; PMCID: PMC9236882.
      Citations: 4     Fields:    Translation:HumansAnimalsCells
    15. Severs LJ, Vlemincx E, Ramirez JM. The psychophysiology of the sigh: I: The sigh from the physiological perspective. Biol Psychol. 2022 04; 170:108313. PMID: 35288214; PMCID: PMC9204854.
      Citations: 4     Fields:    Translation:Humans
    16. Ramirez JM, Karlen-Amarante M, Wang JJ, Huff A, Burgraff N. Breathing disturbances in Rett syndrome. Handb Clin Neurol. 2022; 189:139-151. PMID: 36031301; PMCID: PMC10029146.
      Citations: 4     Fields:    Translation:Humans
    17. Ramirez JM, Vlemincx E, Baertsch NA, Severs LJ. The sigh and related behaviors. Handb Clin Neurol. 2022; 188:357-372. PMID: 35965032.
      Citations: 2     Fields:    Translation:Humans
    18. Burgraff NJ, Bush NE, Ramirez JM, Baertsch NA. Dynamic Rhythmogenic Network States Drive Differential Opioid Responses in the In Vitro Respiratory Network. J Neurosci. 2021 12 01; 41(48):9919-9931. PMID: 34697095; PMCID: PMC8638687.
      Citations: 7     Fields:    Translation:AnimalsCells
    19. Castanza AS, Ramirez S, Tripathi PP, Daza RAM, Kalume FK, Ramirez JM, Hevner RF. AUTS2 Regulates RNA Metabolism and Dentate Gyrus Development in Mice. Cereb Cortex. 2021 08 26; 31(10):4808-4824. PMID: 34013328; PMCID: PMC8408472.
      Citations: 9     Fields:    Translation:Animals
    20. Baertsch NA, Bush NE, Burgraff NJ, Ramirez JM. Dual mechanisms of opioid-induced respiratory depression in the inspiratory rhythm-generating network. Elife. 2021 08 17; 10. PMID: 34402425; PMCID: PMC8390004.
      Citations: 22     Fields:    Translation:AnimalsCells
    21. Baertsch NA, Ramirez JM, Oliveira LM, Moreira TS, Takakura AC. Unraveling the Mechanisms Underlying Irregularities in Inspiratory Rhythm Generation in a Mouse Model of Parkinson's Disease. J Neurosci. 2021 05 26; 41(21):4732-4747. PMID: 33863785; PMCID: PMC8260248.
      Citations: 4     Fields:    Translation:AnimalsCells
    22. Ramirez JM, Burgraff NJ, Wei AD, Baertsch NA, Varga AG, Baghdoyan HA, Lydic R, Morris KF, Bolser DC, Levitt ES. Neuronal mechanisms underlying opioid-induced respiratory depression: our current understanding. J Neurophysiol. 2021 05 01; 125(5):1899-1919. PMID: 33826874; PMCID: PMC8424565.
      Citations: 23     Fields:    Translation:HumansAnimals
    23. Burgraff NJ, Baertsch NA, Ramirez JM. Peptides, Breathing, and Sudden Infant Death Syndrome. Trends Neurosci. 2021 03; 44(3):167-169. PMID: 33549332; PMCID: PMC8645383.
      Citations:    Fields:    Translation:Animals
    24. Ramirez JM, Karlen-Amarante M, Wang JJ, Bush NE, Carroll MS, Weese-Mayer DE, Huff A. The Pathophysiology of Rett Syndrome With a Focus on Breathing Dysfunctions. Physiology (Bethesda). 2020 11 01; 35(6):375-390. PMID: 33052774; PMCID: PMC7864239.
      Citations: 15     Fields:    Translation:HumansAnimals
    25. Ramirez JM. Looking into the future: The Journal of Neurophysiology. J Neurophysiol. 2020 07 01; 124(1):1-3. PMID: 32374209.
      Citations:    Fields:    Translation:Humans
    26. Carroll MS, Ramirez JM, Weese-Mayer DE. Diurnal variation in autonomic regulation among patients with genotyped Rett syndrome. J Med Genet. 2020 11; 57(11):786-793. PMID: 32156713; PMCID: PMC7891682.
      Citations: 12     Fields:    Translation:Humans
    27. Baertsch NA, Ramirez JM. Insights into the dynamic control of breathing revealed through cell-type-specific responses to substance P. Elife. 2019 12 05; 8. PMID: 31804180; PMCID: PMC6957314.
      Citations: 9     Fields:    Translation:Animals
    28. Wei AD, Ramirez JM. Presynaptic Mechanisms and KCNQ Potassium Channels Modulate Opioid Depression of Respiratory Drive. Front Physiol. 2019; 10:1407. PMID: 31824331; PMCID: PMC6882777.
      Citations: 23     
    29. Ramirez SC, Koschnitzky JE, Youngquist TM, Baertsch NA, Smith CV, Ramirez JM. Perinatal Breathing Patterns and Survival in Mice Born Prematurely and at Term. Front Physiol. 2019; 10:1113. PMID: 31543825; PMCID: PMC6728753.
      Citations: 6     
    30. Baertsch NA, Severs LJ, Anderson TM, Ramirez JM. A spatially dynamic network underlies the generation of inspiratory behaviors. Proc Natl Acad Sci U S A. 2019 04 09; 116(15):7493-7502. PMID: 30918122; PMCID: PMC6462111.
      Citations: 28     Fields:    Translation:Animals
    31. Ramirez JM, Baertsch NA. Modeling breathing rhythms. Elife. 2019 03 25; 8. PMID: 30907725; PMCID: PMC6433460.
      Citations:    Fields:    Translation:AnimalsCells
    32. Khuu MA, Pagan CM, Nallamothu T, Hevner RF, Hodge RD, Ramirez JM, Garcia AJ. Intermittent Hypoxia Disrupts Adult Neurogenesis and Synaptic Plasticity in the Dentate Gyrus. J Neurosci. 2019 02 13; 39(7):1320-1331. PMID: 30587544; PMCID: PMC6381238.
      Citations: 34     Fields:    Translation:AnimalsCells
    33. Ramirez JM, Baertsch N. Defining the Rhythmogenic Elements of Mammalian Breathing. Physiology (Bethesda). 2018 09 01; 33(5):302-316. PMID: 30109823; PMCID: PMC6230551.
      Citations: 29     Fields:    Translation:HumansAnimalsCells
    34. Ramirez JM, Severs LJ, Ramirez SC, Agosto-Marlin IM. Advances in cellular and integrative control of oxygen homeostasis within the central nervous system. J Physiol. 2018 08; 596(15):3043-3065. PMID: 29742297; PMCID: PMC6068258.
      Citations: 11     Fields:    Translation:HumansAnimalsCells
    35. Ramirez JM, Baertsch NA. The Dynamic Basis of Respiratory Rhythm Generation: One Breath at a Time. Annu Rev Neurosci. 2018 07 08; 41:475-499. PMID: 29709210; PMCID: PMC6548330.
      Citations: 36     Fields:    Translation:HumansAnimals
    36. Baertsch NA, Baertsch HC, Ramirez JM. The interdependence of excitation and inhibition for the control of dynamic breathing rhythms. Nat Commun. 2018 02 26; 9(1):843. PMID: 29483589; PMCID: PMC5827754.
      Citations: 79     Fields:    Translation:AnimalsCells
    37. Garcia AJ, Dashevskiy T, Khuu MA, Ramirez JM. Chronic Intermittent Hypoxia Differentially Impacts Different States of Inspiratory Activity at the Level of the preBötzinger Complex. Front Physiol. 2017; 8:571. PMID: 28936176; PMCID: PMC5603985.
      Citations: 24     
    38. Harris KD, Dashevskiy T, Mendoza J, Garcia AJ, Ramirez JM, Shea-Brown E. Different roles for inhibition in the rhythm-generating respiratory network. J Neurophysiol. 2017 10 01; 118(4):2070-2088. PMID: 28615332; PMCID: PMC5626906.
      Citations: 20     Fields:    Translation:Animals
    39. Garcia AJ, Ramirez JM. Keeping carbon dioxide in check. Elife. 2017 05 17; 6. PMID: 28513432; PMCID: PMC5435460.
      Citations: 3     Fields:    Translation:Cells
    40. Pollak J, Rai KG, Funk CC, Arora S, Lee E, Zhu J, Price ND, Paddison PJ, Ramirez JM, Rostomily RC. Ion channel expression patterns in glioblastoma stem cells with functional and therapeutic implications for malignancy. PLoS One. 2017; 12(3):e0172884. PMID: 28264064; PMCID: PMC5338779.
      Citations: 21     Fields:    Translation:HumansCells
    41. Anderson TM, Ramirez JM. Respiratory rhythm generation: triple oscillator hypothesis. F1000Res. 2017; 6:139. PMID: 28299192; PMCID: PMC5310385.
      Citations: 29     Fields:    
    42. Ramirez JM, Dashevskiy T, Marlin IA, Baertsch N. Microcircuits in respiratory rhythm generation: commonalities with other rhythm generating networks and evolutionary perspectives. Curr Opin Neurobiol. 2016 12; 41:53-61. PMID: 27589601; PMCID: PMC5495096.
      Citations: 24     Fields:    Translation:HumansAnimalsCells
    43. Ravinder S, Donckels EA, Ramirez JS, Christakis DA, Ramirez JM, Ferguson SM. Excessive Sensory Stimulation during Development Alters Neural Plasticity and Vulnerability to Cocaine in Mice. eNeuro. 2016 Jul-Aug; 3(4). PMID: 27588306; PMCID: PMC4994069.
      Citations: 1     Fields:    Translation:Animals
    44. Zimin PI, Woods CB, Quintana A, Ramirez JM, Morgan PG, Sedensky MM. Glutamatergic Neurotransmission Links Sensitivity to Volatile Anesthetics with Mitochondrial Function. Curr Biol. 2016 08 22; 26(16):2194-201. PMID: 27498564; PMCID: PMC5007115.
      Citations: 17     Fields:    Translation:AnimalsCells
    45. Anderson TM, Garcia AJ, Baertsch NA, Pollak J, Bloom JC, Wei AD, Rai KG, Ramirez JM. A novel excitatory network for the control of breathing. Nature. 2016 08 04; 536(7614):76-80. PMID: 27462817; PMCID: PMC5479418.
      Citations: 98     Fields:    Translation:AnimalsCells
    46. Garcia AJ, Zanella S, Dashevskiy T, Khan SA, Khuu MA, Prabhakar NR, Ramirez JM. Chronic Intermittent Hypoxia Alters Local Respiratory Circuit Function at the Level of the preBötzinger Complex. Front Neurosci. 2016; 10:4. PMID: 26869872; PMCID: PMC4740384.
      Citations: 32     
    47. Tronnes AA, Koschnitzky J, Daza R, Hitti J, Ramirez JM, Hevner R. Effects of Lipopolysaccharide and Progesterone Exposures on Embryonic Cerebral Cortex Development in Mice. Reprod Sci. 2016 06; 23(6):771-8. PMID: 26621965; PMCID: PMC5933149.
      Citations: 12     Fields:    Translation:AnimalsCells
    48. Caughie C, Elsen FP, Doi A, Garcia AJ, Zanella S, Ramirez JM, Koch H. Prostaglandin E2 differentially modulates the central control of eupnoea, sighs and gasping in mice. J Physiol. 2015 01 01; 593(1):305-19. PMID: 25556802; PMCID: PMC4293069.
      Citations: 14     Fields:    Translation:AnimalsCells
    49. Ramirez JM, Anderson TM, Garcia AJ. The ins and outs of breathing. Elife. 2014 Jun 17; 3:e03375. PMID: 24940002; PMCID: PMC4060004.
      Citations: 1     Fields:    Translation:AnimalsCells
    50. Raghuraman S, Garcia AJ, Anderson TM, Twede VD, Curtice KJ, Chase K, Ramirez JM, Olivera BM, Teichert RW. Defining modulatory inputs into CNS neuronal subclasses by functional pharmacological profiling. Proc Natl Acad Sci U S A. 2014 Apr 29; 111(17):6449-54. PMID: 24733934; PMCID: PMC4035978.
      Citations: 8     Fields:    Translation:AnimalsCells
    51. Doi A, Garcia AJ, Elsen F, Kirsch S, Wei AD, Ramirez JM, Zanella S. When norepinephrine becomes a driver of breathing irregularities: how intermittent hypoxia fundamentally alters the modulatory response of the respiratory network. J Neurosci. 2014 Jan 01; 34(1):36-50. PMID: 24381266; PMCID: PMC3866492.
      Citations: 23     Fields:    Translation:AnimalsCells
    52. Garcia AJ, Doi A, Elsen G, Ramirez JM, Viemari JC. ß-Noradrenergic receptor activation specifically modulates the generation of sighs in vivo and in vitro. Front Neural Circuits. 2013; 7:179. PMID: 24273495; PMCID: PMC3824105.
      Citations: 21     Fields:    Translation:AnimalsCells
    53. Ramirez JM, Mitchell GS. Clinical challenges to ventilatory control. Respir Physiol Neurobiol. 2013 Nov 01; 189(2):211-2. PMID: 24056024; PMCID: PMC3988782.
      Citations:    Fields:    Translation:Humans
    54. Ramirez JM, Ward CS, Neul JL. Breathing challenges in Rett syndrome: lessons learned from humans and animal models. Respir Physiol Neurobiol. 2013 Nov 01; 189(2):280-7. PMID: 23816600; PMCID: PMC3812329.
      Citations: 68     Fields:    Translation:HumansAnimals
    55. Ramirez JM, Garcia AJ, Anderson TM, Koschnitzky JE, Peng YJ, Kumar GK, Prabhakar NR. Central and peripheral factors contributing to obstructive sleep apneas. Respir Physiol Neurobiol. 2013 Nov 01; 189(2):344-53. PMID: 23770311; PMCID: PMC3901437.
      Citations: 51     Fields:    Translation:Humans
    56. Garcia AJ, Koschnitzky JE, Ramirez JM. The physiological determinants of sudden infant death syndrome. Respir Physiol Neurobiol. 2013 Nov 01; 189(2):288-300. PMID: 23735486; PMCID: PMC3812300.
      Citations: 37     Fields:    Translation:Humans
    57. Garcia AJ, Rotem-Kohavi N, Doi A, Ramirez JM. Post-hypoxic recovery of respiratory rhythm generation is gender dependent. PLoS One. 2013; 8(4):e60695. PMID: 23593283; PMCID: PMC3620234.
      Citations: 15     Fields:    Translation:AnimalsCells
    58. Garcia AJ, Koschnitzky JE, Dashevskiy T, Ramirez JM. Cardiorespiratory coupling in health and disease. Auton Neurosci. 2013 Apr; 175(1-2):26-37. PMID: 23497744; PMCID: PMC3683976.
      Citations: 35     Fields:    Translation:HumansAnimals
    59. Hodge RD, Garcia AJ, Elsen GE, Nelson BR, Mussar KE, Reiner SL, Ramirez JM, Hevner RF. Tbr2 expression in Cajal-Retzius cells and intermediate neuronal progenitors is required for morphogenesis of the dentate gyrus. J Neurosci. 2013 Feb 27; 33(9):4165-80. PMID: 23447624; PMCID: PMC3623668.
      Citations: 41     Fields:    Translation:AnimalsCells
    60. Koch H, Zanella S, Elsen GE, Smith L, Doi A, Garcia AJ, Wei AD, Xun R, Kirsch S, Gomez CM, Hevner RF, Ramirez JM. Stable respiratory activity requires both P/Q-type and N-type voltage-gated calcium channels. J Neurosci. 2013 Feb 20; 33(8):3633-45. PMID: 23426690; PMCID: PMC3652398.
      Citations: 18     Fields:    Translation:Animals
    61. Carroll MS, Viemari JC, Ramirez JM. Patterns of inspiratory phase-dependent activity in the in vitro respiratory network. J Neurophysiol. 2013 Jan; 109(2):285-95. PMID: 23076109; PMCID: PMC3545453.
      Citations: 35     Fields:    Translation:AnimalsCells
    62. Carroll MS, Ramirez JM. Cycle-by-cycle assembly of respiratory network activity is dynamic and stochastic. J Neurophysiol. 2013 Jan; 109(2):296-305. PMID: 22993257; PMCID: PMC3545454.
      Citations: 54     Fields:    Translation:AnimalsCells
    63. Martell AL, Ramirez JM, Lasky RE, Dwyer JE, Kohrman M, van Drongelen W. The role of voltage dependence of the NMDA receptor in cellular and network oscillation. Eur J Neurosci. 2012 Jul; 36(2):2121-36. PMID: 22805058; PMCID: PMC3400125.
      Citations: 2     Fields:    Translation:AnimalsCells
    64. Crone SA, Viemari JC, Droho S, Mrejeru A, Ramirez JM, Sharma K. Irregular Breathing in Mice following Genetic Ablation of V2a Neurons. J Neurosci. 2012 Jun 06; 32(23):7895-906. PMID: 22674265; PMCID: PMC3652431.
      Citations: 40     Fields:    Translation:AnimalsCells
    65. Quintana A, Zanella S, Koch H, Kruse SE, Lee D, Ramirez JM, Palmiter RD. Fatal breathing dysfunction in a mouse model of Leigh syndrome. J Clin Invest. 2012 Jul; 122(7):2359-68. PMID: 22653057; PMCID: PMC3387817.
      Citations: 62     Fields:    Translation:HumansAnimalsCells
    66. Madisen L, Mao T, Koch H, Zhuo JM, Berenyi A, Fujisawa S, Hsu YW, Garcia AJ, Gu X, Zanella S, Kidney J, Gu H, Mao Y, Hooks BM, Boyden ES, Ramirez JM, Jones AR, Svoboda K, Han X, Turner EE, Zeng H, Buzsáki G. A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing. Nat Neurosci. 2012 Mar 25; 15(5):793-802. PMID: 22446880; PMCID: PMC3337962.
      Citations: 690     Fields:    Translation:AnimalsCells
    67. Carroll MS, Kenny AS, Patwari PP, Ramirez JM, Weese-Mayer DE. Respiratory and cardiovascular indicators of autonomic nervous system dysregulation in familial dysautonomia. Pediatr Pulmonol. 2012 Jul; 47(7):682-91. PMID: 22170819.
      Citations: 13     Fields:    Translation:Humans
    68. Koch H, Garcia AJ, Ramirez JM. Network reconfiguration and neuronal plasticity in rhythm-generating networks. Integr Comp Biol. 2011 Dec; 51(6):856-68. PMID: 21856733; PMCID: PMC3223481.
      Citations: 21     Fields:    Translation:AnimalsCells
    69. Garcia AJ, Khan SA, Kumar GK, Prabhakar NR, Ramirez JM. Hydrogen peroxide differentially affects activity in the pre-Bötzinger complex and hippocampus. J Neurophysiol. 2011 Dec; 106(6):3045-55. PMID: 21849609; PMCID: PMC3234088.
      Citations: 13     Fields:    Translation:AnimalsCells
    70. Garcia AJ, Doi A, Ramirez JM, Viemari JC. Activation of alpha-2 noradrenergic receptors is critical for the generation of fictive eupnea and fictive gasping inspiratory activities in mammals in vitro. Eur J Neurosci. 2011 Jun; 33(12):2228-37. PMID: 21615559; PMCID: PMC3652413.
      Citations: 24     Fields:    Translation:Animals
    71. Ramirez JM, Koch H, Garcia AJ, Doi A, Zanella S. The role of spiking and bursting pacemakers in the neuronal control of breathing. J Biol Phys. 2011 Jun; 37(3):241-61. PMID: 22654176; PMCID: PMC3101325.
      Citations: 32     Fields:    
    72. Mrejeru A, Wei A, Ramirez JM. Calcium-activated non-selective cation currents are involved in generation of tonic and bursting activity in dopamine neurons of the substantia nigra pars compacta. J Physiol. 2011 May 15; 589(Pt 10):2497-514. PMID: 21486760; PMCID: PMC3115821.
      Citations: 52     Fields:    Translation:AnimalsCells
    73. Ramirez JM. The human pre-Bötzinger complex identified. Brain. 2011 Jan; 134(Pt 1):8-10. PMID: 21186262; PMCID: PMC3009844.
      Citations: 7     Fields:    Translation:Humans
    74. Garcia AJ, Zanella S, Koch H, Doi A, Ramirez JM. Chapter 3--networks within networks: the neuronal control of breathing. Prog Brain Res. 2011; 188:31-50. PMID: 21333801; PMCID: PMC3652403.
      Citations: 34     Fields:    Translation:HumansAnimalsCells
    75. Martell A, Dwyer J, Koch H, Zanella S, Kohrman M, Frim D, Ramirez JM, van Drongelen W. N-methyl-D-aspartate-induced oscillatory properties in neocortical pyramidal neurons from patients with epilepsy. J Clin Neurophysiol. 2010 Dec; 27(6):398-405. PMID: 21076319.
      Citations: 5     Fields:    Translation:HumansCells
    76. Marcuccilli CJ, Tryba AK, van Drongelen W, Koch H, Viemari JC, Doren EL, Pytel P, Chevalier M, Mrejeru A, Kohrman MH, Lasky RE, Lew SM, Frim DM, Ramirez JM, Peña-Ortega F. Neuronal bursting properties in focal and parafocal regions in pediatric neocortical epilepsy stratified by histology. J Clin Neurophysiol. 2010 Dec; 27(6):387-97. PMID: 21076335.
      Citations: 14     Fields:    Translation:HumansCells
    77. Hill AA, Garcia AJ, Zanella S, Upadhyaya R, Ramirez JM. Graded reductions in oxygenation evoke graded reconfiguration of the isolated respiratory network. J Neurophysiol. 2011 Feb; 105(2):625-39. PMID: 21084689; PMCID: PMC3059168.
      Citations: 30     Fields:    Translation:Animals
    78. Koch H, Huh SE, Elsen FP, Carroll MS, Hodge RD, Bedogni F, Turner MS, Hevner RF, Ramirez JM. Prostaglandin E2-induced synaptic plasticity in neocortical networks of organotypic slice cultures. J Neurosci. 2010 Sep 01; 30(35):11678-87. PMID: 20810888; PMCID: PMC3842478.
      Citations: 28     Fields:    Translation:AnimalsCells
    79. Doi A, Ramirez JM. State-dependent interactions between excitatory neuromodulators in the neuronal control of breathing. J Neurosci. 2010 Jun 16; 30(24):8251-62. PMID: 20554877; PMCID: PMC3606074.
      Citations: 78     Fields:    Translation:AnimalsCells
    80. Shea SD, Koch H, Baleckaitis D, Ramirez JM, Margoliash D. Neuron-specific cholinergic modulation of a forebrain song control nucleus. J Neurophysiol. 2010 Feb; 103(2):733-45. PMID: 19939956; PMCID: PMC2822690.
      Citations: 14     Fields:    Translation:AnimalsCells
    81. Katz DM, Dutschmann M, Ramirez JM, Hilaire G. Breathing disorders in Rett syndrome: progressive neurochemical dysfunction in the respiratory network after birth. Respir Physiol Neurobiol. 2009 Aug 31; 168(1-2):101-8. PMID: 19394452; PMCID: PMC2758855.
      Citations: 88     Fields:    Translation:HumansAnimals
    82. Doi A, Ramirez JM. Neuromodulation and the orchestration of the respiratory rhythm. Respir Physiol Neurobiol. 2008 Dec 10; 164(1-2):96-104. PMID: 18602029; PMCID: PMC3606077.
      Citations: 113     Fields:    Translation:HumansAnimalsCells
    83. Ramirez JM, Ludvigsen S, Ramirez N, Blix AS, Folkow LP. Remarkable neuronal hypoxia tolerance in the deep-diving adult hooded seal (Cystophora cristata). Neurosci Lett. 2008 Dec 03; 446(2-3):147-50. PMID: 18824079.
      Citations: 20     Fields:    Translation:AnimalsCells
    84. Weese-Mayer DE, Lieske SP, Boothby CM, Kenny AS, Bennett HL, Ramirez JM. Autonomic dysregulation in young girls with Rett Syndrome during nighttime in-home recordings. Pediatr Pulmonol. 2008 Nov; 43(11):1045-1060. PMID: 18831533.
      Citations: 58     Fields:    Translation:Humans
    85. Choi SH, Veeraraghavalu K, Lazarov O, Marler S, Ransohoff RM, Ramirez JM, Sisodia SS. Non-cell-autonomous effects of presenilin 1 variants on enrichment-mediated hippocampal progenitor cell proliferation and differentiation. Neuron. 2008 Aug 28; 59(4):568-80. PMID: 18760694; PMCID: PMC3489017.
      Citations: 90     Fields:    Translation:HumansAnimalsCells
    86. Weese-Mayer DE, Kenny AS, Bennett HL, Ramirez JM, Leurgans SE. Familial dysautonomia: frequent, prolonged and severe hypoxemia during wakefulness and sleep. Pediatr Pulmonol. 2008 Mar; 43(3):251-60. PMID: 18220270.
      Citations: 14     Fields:    Translation:Humans
    87. Tryba AK, Lieske SP, Viemari JC, Thoby-Brisson M, Ramirez JM, Peña F. Differential modulation of neural network and pacemaker activity underlying eupnea and sigh-breathing activities. J Neurophysiol. 2008 May; 99(5):2114-25. PMID: 18287547; PMCID: PMC3860370.
      Citations: 53     Fields:    Translation:AnimalsCells
    88. Trasande CA, Ramirez JM. Activity deprivation leads to seizures in hippocampal slice cultures: is epilepsy the consequence of homeostatic plasticity? J Clin Neurophysiol. 2007 Apr; 24(2):154-64. PMID: 17414971.
      Citations: 34     Fields:    Translation:AnimalsCells
    89. Ramirez JM, Garcia A. Point: Medullary pacemaker neurons are essential for both eupnea and gasping in mammals. J Appl Physiol (1985). 2007 Aug; 103(2):717-8; discussion 722. PMID: 17272416.
      Citations: 16     Fields:    Translation:AnimalsCells
    90. Ramirez JM, Folkow LP, Blix AS. Hypoxia tolerance in mammals and birds: from the wilderness to the clinic. Annu Rev Physiol. 2007; 69:113-43. PMID: 17037981.
      Citations: 89     Fields:    Translation:HumansAnimals
    91. Weese-Mayer DE, Lieske SP, Boothby CM, Kenny AS, Bennett HL, Silvestri JM, Ramirez JM. Autonomic nervous system dysregulation: breathing and heart rate perturbation during wakefulness in young girls with Rett syndrome. Pediatr Res. 2006 Oct; 60(4):443-9. PMID: 16940240.
      Citations: 91     Fields:    Translation:Humans
    92. van Drongelen W, Koch H, Elsen FP, Lee HC, Mrejeru A, Doren E, Marcuccilli CJ, Hereld M, Stevens RL, Ramirez JM. Role of persistent sodium current in bursting activity of mouse neocortical networks in vitro. J Neurophysiol. 2006 Nov; 96(5):2564-77. PMID: 16870839.
      Citations: 35     Fields:    Translation:AnimalsCells
    93. Tryba AK, Ramirez JM, Peña F. Gasping activity in vitro: a rhythm dependent on 5-HT2A receptors. J Neurosci. 2006 Mar 08; 26(10):2623-34. PMID: 16525041; PMCID: PMC6675157.
      Citations: 83     Fields:    Translation:AnimalsCells
    94. Lieske SP, Ramirez JM. Pattern-specific synaptic mechanisms in a multifunctional network. I. Effects of alterations in synapse strength. J Neurophysiol. 2006 Mar; 95(3):1323-33. PMID: 16492944.
      Citations: 32     Fields:    Translation:AnimalsCells
    95. Lieske SP, Ramirez JM. Pattern-specific synaptic mechanisms in a multifunctional network. II. Intrinsic modulation by metabotropic glutamate receptors. J Neurophysiol. 2006 Mar; 95(3):1334-44. PMID: 16492945.
      Citations: 33     Fields:    Translation:AnimalsCells
    96. Viemari JC, Ramirez JM. Norepinephrine differentially modulates different types of respiratory pacemaker and nonpacemaker neurons. J Neurophysiol. 2006 Apr; 95(4):2070-82. PMID: 16394066.
      Citations: 64     Fields:    Translation:AnimalsCells
    97. Viemari JC, Roux JC, Tryba AK, Burnet H, Barthelemy-Requin M, Herzing LB, Moncla A, Mancini J, Ramirez JM, Villard L, Saywell V, Peña F, Zanella S, Bévengut M, Hilaire G. Mecp2 deficiency disrupts norepinephrine and respiratory systems in mice. J Neurosci. 2005 Dec 14; 25(50):11521-30. PMID: 16354910; PMCID: PMC6726028.
      Citations: 128     Fields:    Translation:HumansAnimals
    98. Ramirez JM, Peña F. Hypoxia-induced changes in neuronal network properties. Mol Neurobiol. 2005 Dec; 32(3):251-83. PMID: 16385141.
      Citations: 41     Fields:    Translation:AnimalsCells
    99. Ramirez JM, Viemari JC. Determinants of inspiratory activity. Respir Physiol Neurobiol. 2005 Jul 28; 147(2-3):145-57. PMID: 15964786.
      Citations: 29     Fields:    Translation:HumansAnimals
    100. Elsen FP, Ramirez JM. Postnatal development differentially affects voltage-activated calcium currents in respiratory rhythmic versus nonrhythmic neurons of the pre-Bötzinger complex. J Neurophysiol. 2005 Aug; 94(2):1423-31. PMID: 15888528.
      Citations: 9     Fields:    Translation:AnimalsCells
    101. Ramirez JM, Tryba AK, Peña F. Pacemaker neurons and neuronal networks: an integrative view. Curr Opin Neurobiol. 2004 Dec; 14(6):665-74. PMID: 15582367.
      Citations: 103     Fields:    Translation:HumansAnimalsCells
    102. Tryba AK, Ramirez JM. Background sodium current stabilizes bursting in respiratory pacemaker neurons. J Neurobiol. 2004 Sep 15; 60(4):481-9. PMID: 15307152.
      Citations: 12     Fields:    Translation:AnimalsCells
    103. Ramirez JM, Peña F. Substance P-mediated modulation of pacemaker properties in the mammalian respiratory network. J Neurosci. 2004 Aug 25; 24(34):7549-56. PMID: 15329402; PMCID: PMC6729648.
      Citations: 72     Fields:    Translation:AnimalsCells
    104. Parkis MA, Tryba AK, Ramirez JM, Peña F. Differential contribution of pacemaker properties to the generation of respiratory rhythms during normoxia and hypoxia. Neuron. 2004 Jul 08; 43(1):105-17. PMID: 15233921.
      Citations: 154     Fields:    Translation:AnimalsCells
    105. Tryba AK, Ramirez JM. Hyperthermia modulates respiratory pacemaker bursting properties. J Neurophysiol. 2004 Nov; 92(5):2844-52. PMID: 15190095.
      Citations: 21     Fields:    Translation:AnimalsCells
    106. Ramirez JM, Lieske SP. Commentary on the definition of eupnea and gasping. Respir Physiol Neurobiol. 2003 Dec 16; 139(1):113-9. PMID: 14637318.
      Citations: 10     Fields:    Translation:AnimalsCells
    107. Van Drongelen W, Koch H, Marcuccilli C, Pena F, Ramirez JM. Synchrony levels during evoked seizure-like bursts in mouse neocortical slices. J Neurophysiol. 2003 Sep; 90(3):1571-80. PMID: 12750417.
      Citations: 16     Fields:    Translation:Animals
    108. Tryba AK, Ramirez JM, Peña F. Stabilization of bursting in respiratory pacemaker neurons. J Neurosci. 2003 Apr 15; 23(8):3538-46. PMID: 12716963; PMCID: PMC6742339.
      Citations: 36     Fields:    Translation:AnimalsCells
    109. Tryba AK, Ramirez JM. Response of the respiratory network of mice to hyperthermia. J Neurophysiol. 2003 Jun; 89(6):2975-83. PMID: 12612007.
      Citations: 13     Fields:    Translation:AnimalsCells
    110. Ramirez JM, Peña F. Endogenous activation of serotonin-2A receptors is required for respiratory rhythm generation in vitro. J Neurosci. 2002 Dec 15; 22(24):11055-64. PMID: 12486201; PMCID: PMC6758407.
      Citations: 107     Fields:    Translation:AnimalsCells
    111. Moseley AE, Lieske SP, Wetzel RK, James PF, He S, Shelly DA, Paul RJ, Boivin GP, Witte DP, Ramirez JM, Sweadner KJ, Lingrel JB, Moseley AE, Lieske SP, Wetzel RK, James PF, He S, Shelly DA, Paul RJ, Boivin GP, Witte DP, Ramirez JM, Sweadner KJ, Lingrel JB. The Na,K-ATPase alpha 2 isoform is expressed in neurons, and its absence disrupts neuronal activity in newborn mice. J Biol Chem. 2003 Feb 14; 278(7):5317-24. PMID: 12458206.
      Citations: 57     Fields:    Translation:AnimalsCells
    112. Funk GD, Ramirez JM. Special issue: 'Neural Control of Breathing'. Respir Physiol Neurobiol. 2002 Jul; 131(1-2):1-3. PMID: 12106990.
      Citations: 1     Fields:    Translation:HumansAnimals
    113. Ramirez JM, Zuperku EJ, Alheid GF, Lieske SP, Ptak K, McCrimmon DR. Respiratory rhythm generation: converging concepts from in vitro and in vivo approaches? Respir Physiol Neurobiol. 2002 Jul; 131(1-2):43-56. PMID: 12106994.
      Citations: 16     Fields:    Translation:HumansAnimalsCells
    114. Telgkamp P, Cao YQ, Basbaum AI, Ramirez JM. Long-term deprivation of substance P in PPT-A mutant mice alters the anoxic response of the isolated respiratory network. J Neurophysiol. 2002 Jul; 88(1):206-13. PMID: 12091546.
      Citations: 45     Fields:    Translation:Animals
    115. Blitz DM, Ramirez JM. Long-term modulation of respiratory network activity following anoxia in vitro. J Neurophysiol. 2002 Jun; 87(6):2964-71. PMID: 12037199.
      Citations: 35     Fields:    Translation:Animals
    116. Kelty JD, Noseworthy PA, Feder ME, Robertson RM, Ramirez JM. Thermal preconditioning and heat-shock protein 72 preserve synaptic transmission during thermal stress. J Neurosci. 2002 Jan 01; 22(1):RC193. PMID: 11756523; PMCID: PMC6757608.
      Citations: 27     Fields:    Translation:AnimalsCells
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