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Connection

Chuan He to Transcriptome

This is a "connection" page, showing publications Chuan He has written about Transcriptome.
Connection Strength

6.825
  1. Small-molecule-catalysed deamination enables transcriptome-wide profiling of N6-methyladenosine in RNA. Nat Chem. 2025 Jul; 17(7):1042-1052.
    View in: PubMed
    Score: 0.608
  2. snoRNA-facilitated protein secretion revealed by transcriptome-wide snoRNA target identification. Cell. 2025 Jan 23; 188(2):465-483.e22.
    View in: PubMed
    Score: 0.591
  3. Base-Resolution Sequencing Methods for Whole-Transcriptome Quantification of mRNA Modifications. Acc Chem Res. 2024 01 02; 57(1):47-58.
    View in: PubMed
    Score: 0.553
  4. BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution. Nat Protoc. 2024 02; 19(2):517-538.
    View in: PubMed
    Score: 0.551
  5. m6A-SAC-seq for quantitative whole transcriptome m6A profiling. Nat Protoc. 2023 02; 18(2):626-657.
    View in: PubMed
    Score: 0.515
  6. m6A RNA modifications are measured at single-base resolution across the mammalian transcriptome. Nat Biotechnol. 2022 08; 40(8):1210-1219.
    View in: PubMed
    Score: 0.490
  7. Transcriptome-Wide Detection of Internal N7-Methylguanosine. Methods Mol Biol. 2021; 2298:97-104.
    View in: PubMed
    Score: 0.451
  8. Transcriptome-wide Mapping of Internal N7-Methylguanosine Methylome in Mammalian mRNA. Mol Cell. 2019 06 20; 74(6):1304-1316.e8.
    View in: PubMed
    Score: 0.401
  9. High-Resolution Mapping of N6-Methyladenosine in Transcriptome and Genome Using a Photo-Crosslinking-Assisted Strategy. Methods Enzymol. 2015; 560:161-85.
    View in: PubMed
    Score: 0.309
  10. Decoding the transcriptome and DNA methylome of human primordial germ cells. Sci China Life Sci. 2015 Jul; 58(7):729-30.
    View in: PubMed
    Score: 0.307
  11. Mapping recently identified nucleotide variants in the genome and transcriptome. Nat Biotechnol. 2012 Nov; 30(11):1107-16.
    View in: PubMed
    Score: 0.256
  12. Quantitative profiling of m6A at single base resolution across the life cycle of rice and Arabidopsis. Nat Commun. 2024 Jun 07; 15(1):4881.
    View in: PubMed
    Score: 0.143
  13. Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2'-O-methylation. Cell Res. 2023 09; 33(9):727-730.
    View in: PubMed
    Score: 0.134
  14. Transcriptome-wide profiling and quantification of N6-methyladenosine by enzyme-assisted adenosine deamination. Nat Biotechnol. 2023 07; 41(7):993-1003.
    View in: PubMed
    Score: 0.130
  15. Genetic analyses support the contribution of mRNA N6-methyladenosine (m6A) modification to human disease heritability. Nat Genet. 2020 09; 52(9):939-949.
    View in: PubMed
    Score: 0.109
  16. Keth-seq for transcriptome-wide RNA structure mapping. Nat Chem Biol. 2020 05; 16(5):489-492.
    View in: PubMed
    Score: 0.106
  17. Where, When, and How: Context-Dependent Functions of RNA Methylation Writers, Readers, and Erasers. Mol Cell. 2019 05 16; 74(4):640-650.
    View in: PubMed
    Score: 0.101
  18. Anti-tumour immunity controlled through mRNA m6A methylation and YTHDF1 in dendritic cells. Nature. 2019 02; 566(7743):270-274.
    View in: PubMed
    Score: 0.099
  19. mRNA acetylation: a new addition to the epitranscriptome. Cell Res. 2019 02; 29(2):91-92.
    View in: PubMed
    Score: 0.099
  20. Transcriptome-wide reprogramming of N6-methyladenosine modification by the mouse microbiome. Cell Res. 2019 02; 29(2):167-170.
    View in: PubMed
    Score: 0.098
  21. Chemical Modifications in the Life of an mRNA Transcript. Annu Rev Genet. 2018 11 23; 52:349-372.
    View in: PubMed
    Score: 0.096
  22. Epitranscriptomic influences on development and disease. Genome Biol. 2017 10 23; 18(1):197.
    View in: PubMed
    Score: 0.090
  23. Nm-seq maps 2'-O-methylation sites in human mRNA with base precision. Nat Methods. 2017 Jul; 14(7):695-698.
    View in: PubMed
    Score: 0.088
  24. Nuclear m(6)A Reader YTHDC1 Regulates mRNA Splicing. Trends Genet. 2016 06; 32(6):320-321.
    View in: PubMed
    Score: 0.081
  25. Steady-state hydrogen peroxide induces glycolysis in Staphylococcus aureus and Pseudomonas aeruginosa. J Bacteriol. 2014 Jul; 196(14):2499-513.
    View in: PubMed
    Score: 0.071
  26. Protocol for detecting RBM33-binding sites in HEK293T cells using PAR-CLIP-seq. STAR Protoc. 2024 03 15; 5(1):102855.
    View in: PubMed
    Score: 0.035
  27. Detection of m6A RNA modifications at single-nucleotide resolution using m6A-selective allyl chemical labeling and sequencing. STAR Protoc. 2022 12 16; 3(4):101677.
    View in: PubMed
    Score: 0.032
  28. Development of Mild Chemical Catalysis Conditions for m1A-to-m6A Rearrangement on RNA. ACS Chem Biol. 2022 06 17; 17(6):1334-1342.
    View in: PubMed
    Score: 0.031
  29. Autophagy of the m6A mRNA demethylase FTO is impaired by low-level arsenic exposure to promote tumorigenesis. Nat Commun. 2021 04 12; 12(1):2183.
    View in: PubMed
    Score: 0.029
  30. EGFR/SRC/ERK-stabilized YTHDF2 promotes cholesterol dysregulation and invasive growth of glioblastoma. Nat Commun. 2021 01 08; 12(1):177.
    View in: PubMed
    Score: 0.028
  31. YTHDF2 reduction fuels inflammation and vascular abnormalization in hepatocellular carcinoma. Mol Cancer. 2019 11 18; 18(1):163.
    View in: PubMed
    Score: 0.026
  32. Evolution of a reverse transcriptase to map N1-methyladenosine in human messenger RNA. Nat Methods. 2019 12; 16(12):1281-1288.
    View in: PubMed
    Score: 0.026
  33. Histone H3 trimethylation at lysine 36 guides m6A RNA modification co-transcriptionally. Nature. 2019 03; 567(7748):414-419.
    View in: PubMed
    Score: 0.025
  34. METTL14 Inhibits Hematopoietic Stem/Progenitor Differentiation and Promotes Leukemogenesis via mRNA m6A Modification. Cell Stem Cell. 2018 02 01; 22(2):191-205.e9.
    View in: PubMed
    Score: 0.023
  35. FTO Plays an Oncogenic Role in Acute Myeloid Leukemia as a N6-Methyladenosine RNA Demethylase. Cancer Cell. 2017 01 09; 31(1):127-141.
    View in: PubMed
    Score: 0.021
  36. The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA. Nature. 2016 Feb 25; 530(7591):441-6.
    View in: PubMed
    Score: 0.020
  37. N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions. Nature. 2015 Feb 26; 518(7540):560-4.
    View in: PubMed
    Score: 0.019
  38. 5mC oxidation by Tet2 modulates enhancer activity and timing of transcriptome reprogramming during differentiation. Mol Cell. 2014 Oct 23; 56(2):286-297.
    View in: PubMed
    Score: 0.018
  39. ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility. Mol Cell. 2013 Jan 10; 49(1):18-29.
    View in: PubMed
    Score: 0.016
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.