Tobin R. Sosnick to Protein Structure, Secondary
This is a "connection" page, showing publications Tobin R. Sosnick has written about Protein Structure, Secondary.
Connection Strength
2.781
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Even with nonnative interactions, the updated folding transition states of the homologs Proteins G & L are extensive and similar. Proc Natl Acad Sci U S A. 2015 Jul 07; 112(27):8302-7.
Score: 0.491
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De novo prediction of protein folding pathways and structure using the principle of sequential stabilization. Proc Natl Acad Sci U S A. 2012 Oct 23; 109(43):17442-7.
Score: 0.407
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Early collapse is not an obligate step in protein folding. J Mol Biol. 2004 Apr 23; 338(2):369-82.
Score: 0.227
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D/H amide isotope effect in model alpha-helical peptides. J Am Chem Soc. 2002 Nov 27; 124(47):13994-5.
Score: 0.205
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Trifluoroethanol promotes helix formation by destabilizing backbone exposure: desolvation rather than native hydrogen bonding defines the kinetic pathway of dimeric coiled coil folding. Biochemistry. 1998 Oct 13; 37(41):14613-22.
Score: 0.154
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Hydrogen exchange: the modern legacy of Linderstrøm-Lang. Protein Sci. 1997 May; 6(5):1101-9.
Score: 0.140
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Loss of conformational entropy in protein folding calculated using realistic ensembles and its implications for NMR-based calculations. Proc Natl Acad Sci U S A. 2014 Oct 28; 111(43):15396-401.
Score: 0.117
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The amino-terminal helix modulates light-activated conformational changes in AsLOV2. J Mol Biol. 2012 May 25; 419(1-2):61-74.
Score: 0.098
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Light-activated DNA binding in a designed allosteric protein. Proc Natl Acad Sci U S A. 2008 Aug 05; 105(31):10709-14.
Score: 0.076
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Kinetic barriers and the role of topology in protein and RNA folding. Protein Sci. 2008 Aug; 17(8):1308-18.
Score: 0.075
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Reduced C(beta) statistical potentials can outperform all-atom potentials in decoy identification. Protein Sci. 2007 Oct; 16(10):2123-39.
Score: 0.072
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Small proteins fold through transition states with native-like topologies. J Mol Biol. 2006 Aug 25; 361(4):755-70.
Score: 0.066
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Statistical coil model of the unfolded state: resolving the reconciliation problem. Proc Natl Acad Sci U S A. 2005 Sep 13; 102(37):13099-104.
Score: 0.062
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Fast folding of a helical protein initiated by the collision of unstructured chains. Proc Natl Acad Sci U S A. 2004 Sep 14; 101(37):13478-82.
Score: 0.058
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Random-coil behavior and the dimensions of chemically unfolded proteins. Proc Natl Acad Sci U S A. 2004 Aug 24; 101(34):12491-6.
Score: 0.058
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Distinguishing foldable proteins from nonfolders: when and how do they differ? Proteins. 2002 Oct 01; 49(1):15-23.
Score: 0.051
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Entropic benefit of a cross-link in protein association. Proteins. 2002 Aug 01; 48(2):341-51.
Score: 0.050
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Understanding protein hydrogen bond formation with kinetic H/D amide isotope effects. Nat Struct Biol. 2002 Jun; 9(6):458-63.
Score: 0.050
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D/H amide kinetic isotope effects reveal when hydrogen bonds form during protein folding. Nat Struct Biol. 2000 Jan; 7(1):62-71.
Score: 0.042
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Transition state heterogeneity in GCN4 coiled coil folding studied by using multisite mutations and crosslinking. Proc Natl Acad Sci U S A. 1999 Sep 14; 96(19):10699-704.
Score: 0.041
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Viscosity dependence of the folding kinetics of a dimeric and monomeric coiled coil. Biochemistry. 1999 Feb 23; 38(8):2601-9.
Score: 0.040
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Perplexing cooperative folding and stability of a low-sequence complexity, polyproline 2 protein lacking a hydrophobic core. Proc Natl Acad Sci U S A. 2017 02 28; 114(9):2241-2246.
Score: 0.034
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Aromatic claw: A new fold with high aromatic content that evades structural prediction. Protein Sci. 2017 02; 26(2):208-217.
Score: 0.034
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Introduction of a polar core into the de novo designed protein Top7. Protein Sci. 2016 07; 25(7):1299-307.
Score: 0.032
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Mimicking the folding pathway to improve homology-free protein structure prediction. Proc Natl Acad Sci U S A. 2009 Mar 10; 106(10):3734-9.
Score: 0.020
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The highly cooperative folding of small naturally occurring proteins is likely the result of natural selection. Cell. 2007 Feb 09; 128(3):613-24.
Score: 0.017
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Minimalist representations and the importance of nearest neighbor effects in protein folding simulations. J Mol Biol. 2006 Nov 03; 363(4):835-57.
Score: 0.017
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Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. Biochemistry. 2005 Jul 19; 44(28):9691-702.
Score: 0.015
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Large-scale context in protein folding: villin headpiece. Biochemistry. 2003 Jan 28; 42(3):664-71.
Score: 0.013
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PAS domain receptor photoactive yellow protein is converted to a molten globule state upon activation. J Biol Chem. 2001 Jun 15; 276(24):20821-3.
Score: 0.011
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Protein folding intermediates: native-state hydrogen exchange. Science. 1995 Jul 14; 269(5221):192-7.
Score: 0.008