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Vukica Srajer

TitleResearch Professor
InstitutionUniversity of Chicago
DepartmentBiochem/Mol Bio
AddressChicago IL 60637
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    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Meents A, Wiedorn MO, Srajer V, Henning R, Sarrou I, Bergtholdt J, Barthelmess M, Reinke PYA, Dierksmeyer D, Tolstikova A, Schaible S, Messerschmidt M, Ogata CM, Kissick DJ, Taft MH, Manstein DJ, Lieske J, Oberthuer D, Fischetti RF, Chapman HN. Pink-beam serial crystallography. Nat Commun. 2017 11 03; 8(1):1281. PMID: 29097720.
      View in: PubMed
    2. Sui S, Wang Y, Kolewe KW, Srajer V, Henning R, Schiffman JD, Dimitrakopoulos C, Perry SL. Graphene-based microfluidics for serial crystallography. Lab Chip. 2016 08 02; 16(16):3082-96. PMID: 27241728.
      View in: PubMed
    3. Kaucikas M, Fitzpatrick A, Bryan E, Struve A, Henning R, Kosheleva I, Srajer V, Groenhof G, Van Thor JJ. Room temperature crystal structure of the fast switching M159T mutant of the fluorescent protein dronpa. Proteins. 2015 Mar; 83(3):397-402. PMID: 25524427.
      View in: PubMed
    4. Tenboer J, Basu S, Zatsepin N, Pande K, Milathianaki D, Frank M, Hunter M, Boutet S, Williams GJ, Koglin JE, Oberthuer D, Heymann M, Kupitz C, Conrad C, Coe J, Roy-Chowdhury S, Weierstall U, James D, Wang D, Grant T, Barty A, Yefanov O, Scales J, Gati C, Seuring C, Srajer V, Henning R, Schwander P, Fromme R, Ourmazd A, Moffat K, Van Thor JJ, Spence JC, Fromme P, Chapman HN, Schmidt M. Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein. Science. 2014 12 05; 346(6214):1242-6. PMID: 25477465.
      View in: PubMed
    5. Perry SL, Guha S, Pawate AS, Henning R, Kosheleva I, Srajer V, Kenis PJ, Ren Z. In situ serial Laue diffraction on a microfluidic crystallization device. J Appl Crystallogr. 2014 Dec 01; 47(Pt 6):1975-1982. PMID: 25484843.
      View in: PubMed
    6. van Thor JJ, Warren MM, Lincoln CN, Chollet M, Lemke HT, Fritz DM, Schmidt M, Tenboer J, Ren Z, Srajer V, Moffat K, Graber T. Signal to noise considerations for single crystal femtosecond time resolved crystallography of the Photoactive Yellow Protein. Faraday Discuss. 2014; 171:439-55. PMID: 25415305.
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    7. Schmidt M, Srajer V, Henning R, Ihee H, Purwar N, Tenboer J, Tripathi S. Protein energy landscapes determined by five-dimensional crystallography. Acta Crystallogr D Biol Crystallogr. 2013 Dec; 69(Pt 12):2534-42. PMID: 24311594.
      View in: PubMed
    8. Zhao J, Srajer V, Franzen S. Functional consequences of the open distal pocket of dehaloperoxidase-hemoglobin observed by time-resolved X-ray crystallography. Biochemistry. 2013 Nov 12; 52(45):7943-50. PMID: 24116924.
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    9. Jung YO, Lee JH, Kim J, Schmidt M, Moffat K, Srajer V, Ihee H. Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography. Nat Chem. 2013 Mar; 5(3):212-20. PMID: 23422563.
      View in: PubMed
    10. Youngblut M, Judd ET, Srajer V, Sayyed B, Goelzer T, Elliott SJ, Schmidt M, Pacheco AA. Laue crystal structure of Shewanella oneidensis cytochrome c nitrite reductase from a high-yield expression system. J Biol Inorg Chem. 2012 Apr; 17(4):647-62. PMID: 22382353.
      View in: PubMed
    11. Tripathi S, Srajer V, Purwar N, Henning R, Schmidt M. pH dependence of the photoactive yellow protein photocycle investigated by time-resolved crystallography. Biophys J. 2012 Jan 18; 102(2):325-32. PMID: 22339869.
      View in: PubMed
    12. Ren Z, Srajer V, Knapp JE, Royer WE. Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures. Proc Natl Acad Sci U S A. 2012 Jan 03; 109(1):107-12. PMID: 22171006.
      View in: PubMed
    13. Graber T, Anderson S, Brewer H, Chen YS, Cho HS, Dashdorj N, Henning RW, Kosheleva I, Macha G, Meron M, Pahl R, Ren Z, Ruan S, Schotte F, Srajer V, Viccaro PJ, Westferro F, Anfinrud P, Moffat K. BioCARS: a synchrotron resource for time-resolved X-ray science. J Synchrotron Radiat. 2011 Jul; 18(Pt 4):658-70. PMID: 21685684.
      View in: PubMed
    14. Schmidt M, Graber T, Henning R, Srajer V. Five-dimensional crystallography. Acta Crystallogr A. 2010 Mar; 66(Pt 2):198-206. PMID: 20164643.
      View in: PubMed
    15. Knapp JE, Pahl R, Cohen J, Nichols JC, Schulten K, Gibson QH, Srajer V, Royer WE. Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis. Structure. 2009 Nov 11; 17(11):1494-504. PMID: 19913484.
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    16. Srajer V, Royer WE. Time-resolved x-ray crystallography of heme proteins. Methods Enzymol. 2008; 437:379-95. PMID: 18433638.
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    17. Key J, Srajer V, Pahl R, Moffat K. Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction. Biochemistry. 2007 Apr 24; 46(16):4706-15. PMID: 17385895.
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    18. Knapp JE, Pahl R, Srajer V, Royer WE. Allosteric action in real time: time-resolved crystallographic studies of a cooperative dimeric hemoglobin. Proc Natl Acad Sci U S A. 2006 May 16; 103(20):7649-54. PMID: 16684887.
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    19. Schmidt M, Nienhaus K, Pahl R, Krasselt A, Anderson S, Parak F, Nienhaus GU, Srajer V. Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO. Proc Natl Acad Sci U S A. 2005 Aug 16; 102(33):11704-9. PMID: 16085709.
      View in: PubMed
    20. Ihee H, Rajagopal S, Srajer V, Pahl R, Anderson S, Schmidt M, Schotte F, Anfinrud PA, Wulff M, Moffat K. Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds. Proc Natl Acad Sci U S A. 2005 May 17; 102(20):7145-50. PMID: 15870207.
      View in: PubMed
    21. Rajagopal S, Anderson S, Srajer V, Schmidt M, Pahl R, Moffat K. A structural pathway for signaling in the E46Q mutant of photoactive yellow protein. Structure. 2005 Jan; 13(1):55-63. PMID: 15642261.
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    22. Schmidt M, Ihee H, Pahl R, Srajer V. Protein-ligand interaction probed by time-resolved crystallography. Methods Mol Biol. 2005; 305:115-54. PMID: 15939996.
      View in: PubMed
    23. Anderson S, Srajer V, Moffat K. Structural heterogeneity of cryotrapped intermediates in the bacterial blue light photoreceptor, photoactive yellow protein. Photochem Photobiol. 2004 Jul-Aug; 80:7-14. PMID: 15339224.
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    24. Anderson S, Srajer V, Pahl R, Rajagopal S, Schotte F, Anfinrud P, Wulff M, Moffat K. Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein. Structure. 2004 Jun; 12(6):1039-45. PMID: 15274923.
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    25. Baxter RH, Ponomarenko N, Srajer V, Pahl R, Moffat K, Norris JR. Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center. Proc Natl Acad Sci U S A. 2004 Apr 20; 101(16):5982-7. PMID: 15073325.
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    26. Schmidt M, Pahl R, Srajer V, Anderson S, Ren Z, Ihee H, Rajagopal S, Moffat K. Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data. Proc Natl Acad Sci U S A. 2004 Apr 06; 101(14):4799-804. PMID: 15041745.
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    27. Knapp JE, Srajer V, Pahl R, Royer WE. Immobilization of Scapharca HbI crystals improves data quality in time-resolved crystallographic experiments. Micron. 2004; 35(1-2):107-8. PMID: 15036308.
      View in: PubMed
    28. Ren Z, Perman B, Srajer V, Teng TY, Pradervand C, Bourgeois D, Schotte F, Ursby T, Kort R, Wulff M, Moffat K. A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds. Biochemistry. 2001 Nov 20; 40(46):13788-801. PMID: 11705368.
      View in: PubMed
    29. Srajer V, Ren Z, Teng TY, Schmidt M, Ursby T, Bourgeois D, Pradervand C, Schildkamp W, Wulff M, Moffat K. Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction. Biochemistry. 2001 Nov 20; 40(46):13802-15. PMID: 11705369.
      View in: PubMed
    30. Srajer V, Crosson S, Schmidt M, Key J, Schotte F, Anderson S, Perman B, Ren Z, Teng TY, Bourgeois D, Wulff M, Moffat K. Extraction of accurate structure-factor amplitudes from Laue data: wavelength normalization with wiggler and undulator X-ray sources. J Synchrotron Radiat. 2000 Jul 01; 7(Pt 4):236-44. PMID: 16609201.
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    31. Perman B, Srajer V, Ren Z, Teng T, Pradervand C, Ursby T, Bourgeois D, Schotte F, Wulff M, Kort R, Hellingwerf K, Moffat K. Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle. Science. 1998 Mar 20; 279(5358):1946-50. PMID: 9506946.
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    32. Teng TY, Srajer V, Moffat K. Initial trajectory of carbon monoxide after photodissociation from myoglobin at cryogenic temperatures. Biochemistry. 1997 Oct 07; 36(40):12087-100. PMID: 9315847.
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    33. Genick UK, Borgstahl GE, Ng K, Ren Z, Pradervand C, Burke PM, Srajer V, Teng TY, Schildkamp W, McRee DE, Moffat K, Getzoff ED. Structure of a protein photocycle intermediate by millisecond time-resolved crystallography. Science. 1997 Mar 07; 275(5305):1471-5. PMID: 9045611.
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    34. Srajer V, Teng T, Ursby T, Pradervand C, Ren Z, Adachi S, Schildkamp W, Bourgeois D, Wulff M, Moffat K. Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography. Science. 1996 Dec 06; 274(5293):1726-9. PMID: 8939867.
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    35. Bourgeois D, Ursby T, Wulff M, Pradervand C, Legrand A, Schildkamp W, Labouré S, Srajer V, Teng TY, Roth M, Moffat K. Feasibility and Realization of Single-Pulse Laue Diffraction on Macromolecular Crystals at ESRF. J Synchrotron Radiat. 1996 Mar 01; 3(Pt 2):65-74. PMID: 16702661.
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    36. Teng TY, Srajer V, Moffat K. Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K. Nat Struct Biol. 1994 Oct; 1(10):701-5. PMID: 7634074.
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    37. Srajer V, Champion PM. Investigations of optical line shapes and kinetic hole burning in myoglobin. Biochemistry. 1991 Jul 30; 30(30):7390-402. PMID: 1854744.
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    38. Srajer V, Reinisch L, Champion PM. Investigation of laser-induced long-lived states of photolyzed MbCO. Biochemistry. 1991 May 21; 30(20):4886-95. PMID: 2036357.
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