Loading...
The University of Chicago Header Logo
Keywords
Last Name
Institution

Yan Yuan Tseng

AddressChicago IL 60637
vCardDownload vCard

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    List All   |   Timeline
    1. Lin JJ, Bhattacharjee MJ, Yu CP, Tseng YY, Li WH. Many human RNA viruses show extraordinarily stringent selective constraints on protein evolution. Proc Natl Acad Sci U S A. 2019 09 17; 116(38):19009-19018. PMID: 31484772.
      View in: PubMed
    2. Yu K, Lung PY, Zhao T, Zhao P, Tseng YY, Zhang J. Automatic extraction of protein-protein interactions using grammatical relationship graph. BMC Med Inform Decis Mak. 2018 07 23; 18(Suppl 2):42. PMID: 30066644.
      View in: PubMed
    3. Sanders MA, Zhang H, Mladenovic L, Tseng YY, Granneman JG. Molecular Basis of ABHD5 Lipolysis Activation. Sci Rep. 2017 02 17; 7:42589. PMID: 28211464.
      View in: PubMed
    4. Tseng YY, Li WH. PSC: protein surface classification. Nucleic Acids Res. 2012 Jul; 40(Web Server issue):W435-9. PMID: 22669905.
      View in: PubMed
    5. Tseng YY, Li WH. Classification of protein functional surfaces using structural characteristics. Proc Natl Acad Sci U S A. 2012 Jan 24; 109(4):1170-5. PMID: 22238424.
      View in: PubMed
    6. Tseng YY, Li WH. Evolutionary approach to predicting the binding site residues of a protein from its primary sequence. Proc Natl Acad Sci U S A. 2011 Mar 29; 108(13):5313-8. PMID: 21402946.
      View in: PubMed
    7. Adamian L, Gussin HA, Tseng YY, Muni NJ, Feng F, Qian H, Pepperberg DR, Liang J. Structural model of rho1 GABAC receptor based on evolutionary analysis: Testing of predicted protein-protein interactions involved in receptor assembly and function. Protein Sci. 2009 Nov; 18(11):2371-83. PMID: 19768800.
      View in: PubMed
    8. Tseng YY, Chen ZJ, Li WH. fPOP: footprinting functional pockets of proteins by comparative spatial patterns. Nucleic Acids Res. 2010 Jan; 38(Database issue):D288-95. PMID: 19880384.
      View in: PubMed
    9. Tseng YY, Li WH. Identification of protein functional surfaces by the concept of a split pocket. Proteins. 2009 Sep; 76(4):959-76. PMID: 19326458.
      View in: PubMed
    10. Tseng YY, Dupree C, Chen ZJ, Li WH. SplitPocket: identification of protein functional surfaces and characterization of their spatial patterns. Nucleic Acids Res. 2009 Jul; 37(Web Server issue):W384-9. PMID: 19406922.
      View in: PubMed
    11. Liang J, Tseng YY, Dundas J, Binkowski TA, Joachimiak A, Ouyang Z, Adamian L. Chapter 4. Predicting and characterizing protein functions through matching geometric and evolutionary patterns of binding surfaces. Adv Protein Chem Struct Biol. 2008; 75:107-41. PMID: 20731991.
      View in: PubMed
    12. Tseng YY, Dundas J, Liang J. Predicting protein function and binding profile via matching of local evolutionary and geometric surface patterns. J Mol Biol. 2009 Mar 27; 387(2):451-64. PMID: 19154742.
      View in: PubMed
    13. Tseng YY, Liang J. Predicting enzyme functional surfaces and locating key residues automatically from structures. Ann Biomed Eng. 2007 Jun; 35(6):1037-42. PMID: 17294116.
      View in: PubMed
    14. Adamian L, Ouyang Z, Tseng YY, Liang J. Evolutionary patterns of retinal-binding pockets of type I rhodopsins and their functions. Photochem Photobiol. 2006 Nov-Dec; 82(6):1426-35. PMID: 16922602.
      View in: PubMed
    15. Tseng YY, Liang J. Automated method for predicting enzyme functional surfaces and locating key residues with accuracy and specificity. Conf Proc IEEE Eng Med Biol Soc. 2006; 2006:4552-5. PMID: 17947099.
      View in: PubMed
    16. Tseng YY, Liang J. Estimation of amino acid residue substitution rates at local spatial regions and application in protein function inference: a Bayesian Monte Carlo approach. Mol Biol Evol. 2006 Feb; 23(2):421-36. PMID: 16251508.
      View in: PubMed
    17. Tseng YY, Liang J. Are residues in a protein folding nucleus evolutionarily conserved? J Mol Biol. 2004 Jan 23; 335(4):869-80. PMID: 14698285.
      View in: PubMed
    18. Stitziel NO, Binkowski TA, Tseng YY, Kasif S, Liang J. topoSNP: a topographic database of non-synonymous single nucleotide polymorphisms with and without known disease association. Nucleic Acids Res. 2004 Jan 01; 32(Database issue):D520-2. PMID: 14681472.
      View in: PubMed
    19. Stitziel NO, Tseng YY, Pervouchine D, Goddeau D, Kasif S, Liang J. Structural location of disease-associated single-nucleotide polymorphisms. J Mol Biol. 2003 Apr 11; 327(5):1021-30. PMID: 12662927.
      View in: PubMed
    Tseng's Networks
    Click the "See All" links for more information and interactive visualizations!
    Concepts Expand Description
    _
    Similar People Expand Description
    _
    Physical Neighbors Expand Description
    _