Loading...
The University of Chicago Header Logo
Keywords
Last Name
Institution

Benoit Roux

TitleProfessor
InstitutionUniversity of Chicago
DepartmentBiochemistry and Molecular Biology
AddressChicago IL 60637
vCardDownload vCard

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    List All   |   Timeline
    1. Upp DM, Huang R, Li Y, Bultman MJ, Roux B, Lewis JC. Engineering Dirhodium Artificial Metalloenzymes for Diazo Coupling Cascade Reactions*. Angew Chem Int Ed Engl. 2021 10 25; 60(44):23672-23677. PMID: 34288306.
      View in: PubMed
    2. Baudry J, Bondar AN, Cournia Z, Parks JM, Petridis L, Roux B. Editorial: Advances in computational molecular biophysics. Biochim Biophys Acta Gen Subj. 2021 06; 1865(6):129888. PMID: 33662454.
      View in: PubMed
    3. Boughter CT, Borowska MT, Guthmiller JJ, Bendelac A, Wilson PC, Roux B, Adams EJ. Biochemical patterns of antibody polyreactivity revealed through a bioinformatics-based analysis of CDR loops. Elife. 2020 11 10; 9. PMID: 33169668.
      View in: PubMed
    4. Lin FY, Huang J, Pandey P, Rupakheti C, Li J, Roux BT, MacKerell AD. Further Optimization and Validation of the Classical Drude Polarizable Protein Force Field. J Chem Theory Comput. 2020 May 12; 16(5):3221-3239. PMID: 32282198.
      View in: PubMed
    5. Roux B. Calculating the Effect of Membrane Thickness on the Lifetime of the Gramicidin A Channel: A Landmark. Biophys J. 2019 11 19; 117(10):1779-1780. PMID: 31668331.
      View in: PubMed
    6. Hadjicharalambous MR, Roux BT, Csomor E, Feghali-Bostwick CA, Murray LA, Clarke DL, Lindsay MA. Long intergenic non-coding RNAs regulate human lung fibroblast function: Implications for idiopathic pulmonary fibrosis. Sci Rep. 2019 04 15; 9(1):6020. PMID: 30988425.
      View in: PubMed
    7. Hadjicharalambous MR, Roux BT, Feghali-Bostwick CA, Murray LA, Clarke DL, Lindsay MA. Long Non-coding RNAs Are Central Regulators of the IL-1ß-Induced Inflammatory Response in Normal and Idiopathic Pulmonary Lung Fibroblasts. Front Immunol. 2018; 9:2906. PMID: 30619270.
      View in: PubMed
    8. Loeffler HH, Bosisio S, Duarte Ramos Matos G, Suh D, Roux B, Mobley DL, Michel J. Reproducibility of Free Energy Calculations across Different Molecular Simulation Software Packages. J Chem Theory Comput. 2018 Nov 13; 14(11):5567-5582. PMID: 30289712.
      View in: PubMed
    9. Roux BT, Heward JA, Donnelly LE, Jones SW, Lindsay MA. Catalog of Differentially Expressed Long Non-Coding RNA following Activation of Human and Mouse Innate Immune Response. Front Immunol. 2017; 8:1038. PMID: 28900427.
      View in: PubMed
    10. Hamann PD, Roux BT, Heward JA, Love S, McHugh NJ, Jones SW, Lindsay MA. Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis. Sci Rep. 2017 08 14; 7(1):8024. PMID: 28808260.
      View in: PubMed
    11. Roux B. Ion channels and ion selectivity. Essays Biochem. 2017 05 09; 61(2):201-209. PMID: 28487397.
      View in: PubMed
    12. Sadati M, Ramezani-Dakhel H, Bu W, Sevgen E, Liang Z, Erol C, Rahimi M, Taheri Qazvini N, Lin B, Abbott NL, Roux BT, Schlossman ML, de Pablo JJ. Molecular Structure of Canonical Liquid Crystal Interfaces. J Am Chem Soc. 2017 03 15; 139(10):3841-3850. PMID: 28177227.
      View in: PubMed
    13. Dang B, Shen R, Kubota T, Mandal K, Bezanilla F, Roux B, Kent SB. Inversion of the Side-Chain Stereochemistry of Indvidual Thr or Ile Residues in a Protein Molecule: Impact on the Folding, Stability, and Structure of the ShK Toxin. Angew Chem Int Ed Engl. 2017 03 13; 56(12):3324-3328. PMID: 28194851.
      View in: PubMed
    14. Roux BT, Lindsay MA, Heward JA. Knockdown of Nuclear-Located Enhancer RNAs and Long ncRNAs Using Locked Nucleic Acid GapmeRs. Methods Mol Biol. 2017; 1468:11-8. PMID: 27662866.
      View in: PubMed
    15. Pearson MJ, Philp AM, Heward JA, Roux BT, Walsh DA, Davis ET, Lindsay MA, Jones SW. Long Intergenic Noncoding RNAs Mediate the Human Chondrocyte Inflammatory Response and Are Differentially Expressed in Osteoarthritis Cartilage. Arthritis Rheumatol. 2016 Apr; 68(4):845-56. PMID: 27023358.
      View in: PubMed
    16. Schrack S, Hohl C, Schwack W, Niederer M, Roux B. Determination of cholesterol oxides by gas chromatography-flame ionization detection/mass selective detection and their occurence in lanolin-containing cosmetics and ointments. Int J Cosmet Sci. 2016 Feb; 38(1):93-9. PMID: 26206071.
      View in: PubMed
    17. Ilott NE, Heward JA, Roux B, Tsitsiou E, Fenwick PS, Lenzi L, Goodhead I, Hertz-Fowler C, Heger A, Hall N, Donnelly LE, Sims D, Lindsay MA. Corrigendum: Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes. Nat Commun. 2015 Apr 09; 6:6814. PMID: 25855049.
      View in: PubMed
    18. Martin E, Knapp S, Engh RA, Moebitz H, Varin T, Roux B, Meiler J, Berdini V, Baumann A, Vieth M. Perspective on computational and structural aspects of kinase discovery from IPK2014. Biochim Biophys Acta. 2015 Oct; 1854(10 Pt B):1595-604. PMID: 25861861.
      View in: PubMed
    19. Roux BT, Lindsay MA. LincRNA signatures in human lymphocytes. Nat Immunol. 2015 Mar; 16(3):220-2. PMID: 25689433.
      View in: PubMed
    20. Gaudet R, Roux B, Minor DL. Insights into the molecular foundations of electrical excitation. J Mol Biol. 2015 Jan 16; 427(1):1-2. PMID: 25542854.
      View in: PubMed
    21. Heward JA, Roux BT, Lindsay MA. Divergent signalling pathways regulate lipopolysaccharide-induced eRNA expression in human monocytic THP1 cells. FEBS Lett. 2015 Jan 30; 589(3):396-406. PMID: 25554418.
      View in: PubMed
    22. McCammon JA, Roux B, Voth G, Yang W. Special Issue on Free Energy. J Chem Theory Comput. 2014 Jul 08; 10(7):2631. PMID: 26586502.
      View in: PubMed
    23. IIott NE, Heward JA, Roux B, Tsitsiou E, Fenwick PS, Lenzi L, Goodhead I, Hertz-Fowler C, Heger A, Hall N, Donnelly LE, Sims D, Lindsay MA. Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes. Nat Commun. 2014 Jun 09; 5:3979. PMID: 24909122.
      View in: PubMed
    24. Tempkin JO, Qi B, Saunders MG, Roux B, Dinner AR, Weare J. Using multiscale preconditioning to accelerate the convergence of iterative molecular calculations. J Chem Phys. 2014 May 14; 140(18):184114. PMID: 24832260.
      View in: PubMed
    25. Raghuraman H, Islam SM, Mukherjee S, Roux B, Perozo E. Dynamics transitions at the outer vestibule of the KcsA potassium channel during gating. Proc Natl Acad Sci U S A. 2014 Feb 04; 111(5):1831-6. PMID: 24429344.
      View in: PubMed
    26. Binkowski TA, Jiang W, Roux B, Anderson WF, Joachimiak A. Virtual high-throughput ligand screening. Methods Mol Biol. 2014; 1140:251-61. PMID: 24590723.
      View in: PubMed
    27. Roux B, Islam SM. Restrained-ensemble molecular dynamics simulations based on distance histograms from double electron-electron resonance spectroscopy. J Phys Chem B. 2013 May 02; 117(17):4733-9. PMID: 23510121.
      View in: PubMed
    28. Wojtas-Niziurski W, Meng Y, Roux B, Bernèche S. Self-Learning Adaptive Umbrella Sampling Method for the Determination of Free Energy Landscapes in Multiple Dimensions. J Chem Theory Comput. 2013 Apr 09; 9(4):1885-1895. PMID: 23814508.
      View in: PubMed
    29. Roux B, Weare J. On the statistical equivalence of restrained-ensemble simulations with the maximum entropy method. J Chem Phys. 2013 Feb 28; 138(8):084107. PMID: 23464140.
      View in: PubMed
    30. Luo Y, Jiang W, Yu H, MacKerell AD, Roux B. Simulation study of ion pairing in concentrated aqueous salt solutions with a polarizable force field. Faraday Discuss. 2013; 160:135-49; discussion 207-24. PMID: 23795497.
      View in: PubMed
    31. Hyde HC, Sandtner W, Vargas E, Dagcan AT, Robertson JL, Roux B, Correa AM, Bezanilla F. Nano-positioning system for structural analysis of functional homomeric proteins in multiple conformations. Structure. 2012 Oct 10; 20(10):1629-40. PMID: 23063010.
      View in: PubMed
    32. Robertson JL, Palmer LG, Roux B. Multi-ion distributions in the cytoplasmic domain of inward rectifier potassium channels. Biophys J. 2012 Aug 08; 103(3):434-443. PMID: 22947859.
      View in: PubMed
    33. Roux B. Ion binding sites and their representations by reduced models. J Phys Chem B. 2012 Jun 14; 116(23):6966-79. PMID: 22494321.
      View in: PubMed
    34. Rowley CN, Roux B. The Solvation Structure of Na(+) and K(+) in Liquid Water Determined from High Level ab Initio Molecular Dynamics Simulations. J Chem Theory Comput. 2012 Oct 09; 8(10):3526-35. PMID: 26593000.
      View in: PubMed
    35. Sandtner W, Egwolf B, Khalili-Araghi F, Sánchez-Rodríguez JE, Roux B, Bezanilla F, Holmgren M. Ouabain binding site in a functioning Na+/K+ ATPase. J Biol Chem. 2011 Nov 04; 286(44):38177-38183. PMID: 21911500.
      View in: PubMed
    36. Roux B. Computational electrophysiology: the molecular dynamics of ion channel permeation and selectivity in atomistic detail. Biophys J. 2011 Aug 17; 101(4):755-6. PMID: 21843464.
      View in: PubMed
    37. Gajewski C, Dagcan A, Roux B, Deutsch C. Biogenesis of the pore architecture of a voltage-gated potassium channel. Proc Natl Acad Sci U S A. 2011 Feb 22; 108(8):3240-5. PMID: 21300900.
      View in: PubMed
    38. Dalmas O, Cuello LG, Jogini V, Cortes DM, Roux B, Perozo E. Structural dynamics of the magnesium-bound conformation of CorA in a lipid bilayer. Structure. 2010 Jul 14; 18(7):868-78. PMID: 20637423.
      View in: PubMed
    39. Roux B, Yu H. Assessing the accuracy of approximate treatments of ion hydration based on primitive quasichemical theory. J Chem Phys. 2010 Jun 21; 132(23):234101. PMID: 20572683.
      View in: PubMed
    40. Roux B. Exploring the ion selectivity properties of a large number of simplified binding site models. Biophys J. 2010 Jun 16; 98(12):2877-85. PMID: 20550900.
      View in: PubMed
    41. Roux B. Perspectives on: molecular dynamics and computational methods. J Gen Physiol. 2010 Jun; 135(6):547-8. PMID: 20513755.
      View in: PubMed
    42. Lopes PE, Roux B, Mackerell AD. Molecular modeling and dynamics studies with explicit inclusion of electronic polarizability. Theory and applications. Theor Chem Acc. 2009 Sep; 124(1-2):11-28. PMID: 20577578.
      View in: PubMed
    43. Brooks BR, Brooks CL, Mackerell AD, Nilsson L, Petrella RJ, Roux B, Won Y, Archontis G, Bartels C, Boresch S, Caflisch A, Caves L, Cui Q, Dinner AR, Feig M, Fischer S, Gao J, Hodoscek M, Im W, Kuczera K, Lazaridis T, Ma J, Ovchinnikov V, Paci E, Pastor RW, Post CB, Pu JZ, Schaefer M, Tidor B, Venable RM, Woodcock HL, Wu X, Yang W, York DM, Karplus M. CHARMM: the biomolecular simulation program. J Comput Chem. 2009 Jul 30; 30(10):1545-614. PMID: 19444816.
      View in: PubMed
    44. Numano R, Szobota S, Lau AY, Gorostiza P, Volgraf M, Roux B, Trauner D, Isacoff EY. Nanosculpting reversed wavelength sensitivity into a photoswitchable iGluR. Proc Natl Acad Sci U S A. 2009 Apr 21; 106(16):6814-9. PMID: 19342491.
      View in: PubMed
    45. Sezer D, Freed JH, Roux B. Using Markov models to simulate electron spin resonance spectra from molecular dynamics trajectories. J Phys Chem B. 2008 Sep 04; 112(35):11014-27. PMID: 18698714.
      View in: PubMed
    46. Roux B. The membrane potential and its representation by a constant electric field in computer simulations. Biophys J. 2008 Nov 01; 95(9):4205-16. PMID: 18641071.
      View in: PubMed
    47. Moulédous L, Merker S, Neasta J, Roux B, Zajac JM, Mollereau C. Neuropeptide FF-sensitive confinement of mu opioid receptor does not involve lipid rafts in SH-SY5Y cells. Biochem Biophys Res Commun. 2008 Aug 15; 373(1):80-4. PMID: 18544342.
      View in: PubMed
    48. Roux B. Lonely arginine seeks friendly environment. J Gen Physiol. 2007 Aug; 130(2):233-6. PMID: 17635960.
      View in: PubMed
    49. Roux B. Extracellular blockade of potassium channels by TEA+: the tip of the iceberg? J Gen Physiol. 2006 Dec; 128(6):635-6. PMID: 17130517.
      View in: PubMed
    50. Roux B. Dissecting the coupling between the voltage sensor and pore domains. Neuron. 2006 Nov 22; 52(4):568-9. PMID: 17114039.
      View in: PubMed
    51. Allen TW, Andersen OS, Roux B. Molecular dynamics - potential of mean force calculations as a tool for understanding ion permeation and selectivity in narrow channels. Biophys Chem. 2006 Dec 01; 124(3):251-67. PMID: 16781050.
      View in: PubMed
    52. Allen TW, Andersen OS, Roux B. Ion permeation through a narrow channel: using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields. Biophys J. 2006 May 15; 90(10):3447-68. PMID: 16500984.
      View in: PubMed
    53. Allen TW, Andersen OS, Roux B. On the importance of atomic fluctuations, protein flexibility, and solvent in ion permeation. J Gen Physiol. 2004 Dec; 124(6):679-90. PMID: 15572347.
      View in: PubMed
    54. Roux B, Schulten K. Computational studies of membrane channels. Structure. 2004 Aug; 12(8):1343-51. PMID: 15296727.
      View in: PubMed
    55. Ronzon F, Morandat S, Roux B, Bortolato M. Insertion of a glycosylphosphatidylinositol-anchored enzyme into liposomes. J Membr Biol. 2004 Feb 01; 197(3):169-77. PMID: 15042348.
      View in: PubMed
    56. Allen TW, Andersen OS, Roux B. Structure of gramicidin a in a lipid bilayer environment determined using molecular dynamics simulations and solid-state NMR data. J Am Chem Soc. 2003 Aug 13; 125(32):9868-77. PMID: 12904055.
      View in: PubMed
    57. Lainé M, Lin MC, Bannister JP, Silverman WR, Mock AF, Roux B, Papazian DM. Atomic proximity between S4 segment and pore domain in Shaker potassium channels. Neuron. 2003 Jul 31; 39(3):467-81. PMID: 12895421.
      View in: PubMed
    58. Morandat S, Bortolato M, Roux B. Role of GPI-anchored enzyme in liposome detergent-resistance. J Membr Biol. 2003 Feb 01; 191(3):215-21. PMID: 12571756.
      View in: PubMed
    59. Yang L, Beard W, Wilson S, Roux B, Broyde S, Schlick T. Local deformations revealed by dynamics simulations of DNA polymerase Beta with DNA mismatches at the primer terminus. J Mol Biol. 2002 Aug 16; 321(3):459-78. PMID: 12162959.
      View in: PubMed
    60. Simoes M, Garneau L, Klein H, Banderali U, Hobeila F, Roux B, Parent L, Sauvé R. Cysteine mutagenesis and computer modeling of the S6 region of an intermediate conductance IKCa channel. J Gen Physiol. 2002 Jul; 120(1):99-116. PMID: 12084779.
      View in: PubMed
    61. Philippsen A, Im W, Engel A, Schirmer T, Roux B, Müller DJ. Imaging the electrostatic potential of transmembrane channels: atomic probe microscopy of OmpF porin. Biophys J. 2002 Mar; 82(3):1667-76. PMID: 11867478.
      View in: PubMed
    62. Roux B. What can be deduced about the structure of Shaker from available data? Novartis Found Symp. 2002; 245:84-101; discussion 101-8, 165-8. PMID: 12027017.
      View in: PubMed
    63. Bernèche S, Roux B. Energetics of ion conduction through the K+ channel. Nature. 2001 Nov 01; 414(6859):73-7. PMID: 11689945.
      View in: PubMed
    64. Crouzy S, Bernèche S, Roux B. Extracellular blockade of K(+) channels by TEA: results from molecular dynamics simulations of the KcsA channel. J Gen Physiol. 2001 Aug; 118(2):207-18. PMID: 11479347.
      View in: PubMed
    65. Lagüe P, Zuckermann MJ, Roux B. Lipid-mediated interactions between intrinsic membrane proteins: dependence on protein size and lipid composition. Biophys J. 2001 Jul; 81(1):276-84. PMID: 11423413.
      View in: PubMed
    66. Young MA, Gonfloni S, Superti-Furga G, Roux B, Kuriyan J. Dynamic coupling between the SH2 and SH3 domains of c-Src and Hck underlies their inactivation by C-terminal tyrosine phosphorylation. Cell. 2001 Apr 06; 105(1):115-26. PMID: 11301007.
      View in: PubMed
    67. Schumaker MF, Pomès R, Roux B. Framework model for single proton conduction through gramicidin. Biophys J. 2001 Jan; 80(1):12-30. PMID: 11159380.
      View in: PubMed
    68. Lagüe P, Zuckermann MJ, Roux B. Lipid-mediated interactions between intrinsic membrane proteins: a theoretical study based on integral equations. Biophys J. 2000 Dec; 79(6):2867-79. PMID: 11106595.
      View in: PubMed
    69. Schumaker MF, Pomès R, Roux B. A combined molecular dynamics and diffusion model of single proton conduction through gramicidin. Biophys J. 2000 Dec; 79(6):2840-57. PMID: 11106593.
      View in: PubMed
    70. Roux B, Bernèche S, Im W. Ion channels, permeation, and electrostatics: insight into the function of KcsA. Biochemistry. 2000 Nov 07; 39(44):13295-306. PMID: 11063565.
      View in: PubMed
    71. Im W, Seefeld S, Roux B. A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels. Biophys J. 2000 Aug; 79(2):788-801. PMID: 10920012.
      View in: PubMed
    72. Bernèche S, Roux B. Molecular dynamics of the KcsA K(+) channel in a bilayer membrane. Biophys J. 2000 Jun; 78(6):2900-17. PMID: 10827971.
      View in: PubMed
    73. Nina M, Bernèche S, Roux B. Anchoring of a monotopic membrane protein: the binding of prostaglandin H2 synthase-1 to the surface of a phospholipid bilayer. Eur Biophys J. 2000; 29(6):439-54. PMID: 11081405.
      View in: PubMed
    74. Roux B. Proton wires are different. Biophys J. 1999 Nov; 77(5):2331-2. PMID: 10545337.
      View in: PubMed
    75. Bortolato M, Besson F, Roux B. Role of metal ions on the secondary and quaternary structure of alkaline phosphatase from bovine intestinal mucosa. Proteins. 1999 Nov 01; 37(2):310-8. PMID: 10584076.
      View in: PubMed
    76. Roux B. Theories of ion permeation: a chaser. J Gen Physiol. 1999 Oct; 114(4):605-8. PMID: 10577028.
      View in: PubMed
    77. Bonnin S, Besson F, Gelhausen M, Chierici S, Roux B. A FTIR spectroscopy evidence of the interactions between wheat germ agglutinin and N-acetylglucosamine residues. FEBS Lett. 1999 Aug 13; 456(3):361-4. PMID: 10462044.
      View in: PubMed
    78. Roux B, MacKinnon R. The cavity and pore helices in the KcsA K+ channel: electrostatic stabilization of monovalent cations. Science. 1999 Jul 02; 285(5424):100-2. PMID: 10390357.
      View in: PubMed
    79. Roux B. Statistical mechanical equilibrium theory of selective ion channels. Biophys J. 1999 Jul; 77(1):139-53. PMID: 10388746.
      View in: PubMed
    80. Nina M, Im W, Roux B. Optimized atomic radii for protein continuum electrostatics solvation forces. Biophys Chem. 1999 Apr 05; 78(1-2):89-96. PMID: 17030305.
      View in: PubMed
    81. Roux B, Simonson T. Implicit solvent models. Biophys Chem. 1999 Apr 05; 78(1-2):1-20. PMID: 17030302.
      View in: PubMed
    82. Baudry J, Crouzy S, Roux B, Smith JC. Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin. Biophys J. 1999 Apr; 76(4):1909-17. PMID: 10096888.
      View in: PubMed
    83. Roux B, Woolf TB. The binding site of sodium in the gramicidin A channel. Novartis Found Symp. 1999; 225:113-24; discussion 124-7. PMID: 10472051.
      View in: PubMed
    84. Marchand S, Roux B. Molecular dynamics study of calbindin D9k in the apo and singly and doubly calcium-loaded states. Proteins. 1998 Nov 01; 33(2):265-84. PMID: 9779793.
      View in: PubMed
    85. Bernèche S, Nina M, Roux B. Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane. Biophys J. 1998 Oct; 75(4):1603-18. PMID: 9746504.
      View in: PubMed
    86. Pomès R, Roux B. Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules. Biophys J. 1998 Jul; 75(1):33-40. PMID: 9649365.
      View in: PubMed
    87. Roux B. Molecular dynamics simulations of ion channels: how far have we gone and where are we heading? Biophys J. 1998 Jun; 74(6):2744-5. PMID: 9635728.
      View in: PubMed
    88. MacKerell AD, Bashford D, Bellott M, Dunbrack RL, Evanseck JD, Field MJ, Fischer S, Gao J, Guo H, Ha S, Joseph-McCarthy D, Kuchnir L, Kuczera K, Lau FT, Mattos C, Michnick S, Ngo T, Nguyen DT, Prodhom B, Reiher WE, Roux B, Schlenkrich M, Smith JC, Stote R, Straub J, Watanabe M, Wiórkiewicz-Kuczera J, Yin D, Karplus M. All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B. 1998 Apr 30; 102(18):3586-616. PMID: 24889800.
      View in: PubMed
    89. Lagüe P, Zuckermann MJ, Roux B. Protein inclusion in lipid membranes: a theory based on the hypernetted chain integral equation. Faraday Discuss. 1998; (111):165-72; discussion 225-46. PMID: 10822607.
      View in: PubMed
    90. Ketchem R, Roux B, Cross T. High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints. Structure. 1997 Dec 15; 5(12):1655-69. PMID: 9438865.
      View in: PubMed
    91. Roux B. Influence of the membrane potential on the free energy of an intrinsic protein. Biophys J. 1997 Dec; 73(6):2980-9. PMID: 9414213.
      View in: PubMed
    92. Belohorcová K, Davis JH, Woolf TB, Roux B. Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study. Biophys J. 1997 Dec; 73(6):3039-55. PMID: 9414218.
      View in: PubMed
    93. Mohanty D, Elber R, Thirumalai D, Beglov D, Roux B. Kinetics of peptide folding: computer simulations of SYPFDV and peptide variants in water. J Mol Biol. 1997 Sep 26; 272(3):423-42. PMID: 9325101.
      View in: PubMed
    94. Nosjean O, Briolay A, Roux B. Mammalian GPI proteins: sorting, membrane residence and functions. Biochim Biophys Acta. 1997 Sep 08; 1331(2):153-86. PMID: 9325440.
      View in: PubMed
    95. Woolf TB, Roux B. The binding site of sodium in the gramicidin A channel: comparison of molecular dynamics with solid-state NMR data. Biophys J. 1997 May; 72(5):1930-45. PMID: 9129798.
      View in: PubMed
    96. Petrescu AJ, Receveur V, Calmettes P, Durand D, Desmadril M, Roux B, Smith JC. Small-angle neutron scattering by a strongly denatured protein: analysis using random polymer theory. Biophys J. 1997 Jan; 72(1):335-42. PMID: 8994618.
      View in: PubMed
    97. Roux B. Valence selectivity of the gramicidin channel: a molecular dynamics free energy perturbation study. Biophys J. 1996 Dec; 71(6):3177-85. PMID: 8968588.
      View in: PubMed
    98. Roux B. Commentary: surface tension of biomembranes. Biophys J. 1996 Sep; 71(3):1346-7. PMID: 8874008.
      View in: PubMed
    99. Roux B, Nina M, Pomès R, Smith JC. Thermodynamic stability of water molecules in the bacteriorhodopsin proton channel: a molecular dynamics free energy perturbation study. Biophys J. 1996 Aug; 71(2):670-81. PMID: 8842206.
      View in: PubMed
    100. Pomès R, Roux B. Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel. Biophys J. 1996 Jul; 71(1):19-39. PMID: 8804586.
      View in: PubMed
    101. Woolf TB, Roux B. Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer. Proteins. 1996 Jan; 24(1):92-114. PMID: 8628736.
      View in: PubMed
    102. de La Fournière L, Nosjean O, Buchet R, Roux B. Thermal and pH stabilities of alkaline phosphatase from bovine intestinal mucosa: a FTIR study. Biochim Biophys Acta. 1995 Apr 27; 1248(2):186-92. PMID: 7748901.
      View in: PubMed
    103. Roux B, Prod'hom B, Karplus M. Ion transport in the gramicidin channel: molecular dynamics study of single and double occupancy. Biophys J. 1995 Mar; 68(3):876-92. PMID: 7538804.
      View in: PubMed
    104. Nina M, Roux B, Smith JC. Functional interactions in bacteriorhodopsin: a theoretical analysis of retinal hydrogen bonding with water. Biophys J. 1995 Jan; 68(1):25-39. PMID: 7711248.
      View in: PubMed
    105. Woolf TB, Roux B. Molecular dynamics simulation of the gramicidin channel in a phospholipid bilayer. Proc Natl Acad Sci U S A. 1994 Nov 22; 91(24):11631-5. PMID: 7526400.
      View in: PubMed
    106. Crouzy S, Woolf TB, Roux B. A molecular dynamics study of gating in dioxolane-linked gramicidin A channels. Biophys J. 1994 Oct; 67(4):1370-86. PMID: 7529578.
      View in: PubMed
    107. Briolay A, Rousset B, Roux B. Nuclear proteins interacting with DNA and tubulin. Study of the interaction of the High Mobility Group protein 1 with tubulin. Biochim Biophys Acta. 1994 Sep 13; 1219(1):39-46. PMID: 8086476.
      View in: PubMed
    108. Roux B, Karplus M. Molecular dynamics simulations of the gramicidin channel. Annu Rev Biophys Biomol Struct. 1994; 23:731-61. PMID: 7522667.
      View in: PubMed
    109. Ferrand M, Zaccai G, Nina M, Smith JC, Etchebest C, Roux B. Structure and dynamics of bacteriorhodopsin. Comparison of simulation and experiment. FEBS Lett. 1993 Aug 02; 327(3):256-60. PMID: 8348952.
      View in: PubMed
    110. Thomas A, Roux B, Smith JC. Computer simulations of the flexibility of a series of synthetic cyclic peptide analogues. Biopolymers. 1993 Aug; 33(8):1249-70. PMID: 8364158.
      View in: PubMed
    111. Calmettes P, Roux B, Durand D, Desmadril M, Smith JC. Configurational distribution of denatured phosphoglycerate kinase. J Mol Biol. 1993 Jun 05; 231(3):840-8. PMID: 8515454.
      View in: PubMed
    112. Roux B, Walsh CT. p-Aminobenzoate synthesis in Escherichia coli: mutational analysis of three conserved amino acid residues of the amidotransferase PabA. Biochemistry. 1993 Apr 13; 32(14):3763-8. PMID: 8096767.
      View in: PubMed
    113. Chassot S, Lambert V, Kay A, Godinot C, Roux B, Trepo C, Cova L. Fine mapping of neutralization epitopes on duck hepatitis B virus (DHBV) pre-S protein using monoclonal antibodies and overlapping peptides. Virology. 1993 Jan; 192(1):217-23. PMID: 7685963.
      View in: PubMed
    114. Roux B, Walsh CT. p-aminobenzoate synthesis in Escherichia coli: kinetic and mechanistic characterization of the amidotransferase PabA. Biochemistry. 1992 Aug 04; 31(30):6904-10. PMID: 1637823.
      View in: PubMed
    115. Baubichon-Cortay H, Mallet L, Denoroy L, Roux B. Histone H1a subtype presents structural differences compared to other histone H1 subtypes. Evidence for a specific motif in the C-terminal domain. Biochim Biophys Acta. 1992 Jul 31; 1122(2):167-77. PMID: 1643090.
      View in: PubMed
    116. Divita G, Di Pietro A, Roux B, Gautheron DC. Differential nucleotide binding to catalytic and noncatalytic sites and related conformational changes involving alpha/beta-subunit interactions as monitored by sensitive intrinsic fluorescence in Schizosaccharomyces pombe mitochondrial F1. Biochemistry. 1992 Jun 30; 31(25):5791-8. PMID: 1319203.
      View in: PubMed
    117. Roux B, Karplus M. Ion transport in a model gramicidin channel. Structure and thermodynamics. Biophys J. 1991 May; 59(5):961-81. PMID: 1714305.
      View in: PubMed
    118. Divita G, Di Pietro A, Deléage G, Roux B, Gautheron DC. Intrinsic tryptophan fluorescence of Schizosaccharomyces pombe mitochondrial F1-ATPase. A powerful probe for phosphate and nucleotide interactions. Biochemistry. 1991 Apr 02; 30(13):3256-62. PMID: 1826214.
      View in: PubMed
    119. Roux B, Brüschweiler R, Ernst RR. The structure of gramicidin A in dimethylsulfoxide/acetone. Eur J Biochem. 1990 Nov 26; 194(1):57-60. PMID: 1701388.
      View in: PubMed
    120. Tchouatcha-Tchouassom JC, Julliard JH, Roux B. Isolation and characterisation of five histone H1 subtypes from adult rat liver. Biochim Biophys Acta. 1989 Nov 02; 1009(2):121-8. PMID: 2679880.
      View in: PubMed
    121. Godinot C, Colorio S, Cretin F, Inçaurgarat B, Deleage G, Roux B. Epitope of OSCP oligomycin sensitivity conferring protein exposed at the surface of the mitochondrial ATPase-ATPsynthase complex. Biochimie. 1989 Aug; 71(8):917-29. PMID: 2478197.
      View in: PubMed
    122. Deléage G, Clerc FF, Roux B, Gautheron DC. ANTHEPROT: a package for protein sequence analysis using a microcomputer. Comput Appl Biosci. 1988 Aug; 4(3):351-6. PMID: 3416197.
      View in: PubMed
    123. Roux B, Karplus M. The normal modes of the gramicidin-A dimer channel. Biophys J. 1988 Mar; 53(3):297-309. PMID: 2450595.
      View in: PubMed
    124. Gneno R, Azzar G, Got R, Roux B. Temperature and external electric field influence in membrane permeability of Babesia infected erythrocytes. Int J Biochem. 1987; 19(11):1069-73. PMID: 3428479.
      View in: PubMed
    125. Mithieux G, Roux B, Rousset B. Tubulin-chromatin interactions: evidence for tubulin-binding sites on chromatin and isolated oligonucleosomes. Biochim Biophys Acta. 1986 Aug 29; 888(1):49-61. PMID: 3741889.
      View in: PubMed
    126. Vidal H, Roux B, Riou JP. Phosphorylation- and ligand-induced conformational changes of rat liver fructose-1,6-bisphosphatase. Arch Biochem Biophys. 1986 Aug 01; 248(2):604-11. PMID: 3017215.
      View in: PubMed
    127. Marion C, Martinage A, Tirard A, Roux B, Daune M, Mazen A. Histone phosphorylation in native chromatin induces local structural changes as probed by electric birefringence. J Mol Biol. 1985 Nov 20; 186(2):367-79. PMID: 4087298.
      View in: PubMed
    128. Niveleau A, Roux B, Adouard V, Dante R, Revet B, Delain E. Antibodies to Z DNA stabilized with polyarginine. FEBS Lett. 1985 Oct 21; 191(1):67-71. PMID: 4054305.
      View in: PubMed
    129. Mithieux G, Chauvin F, Roux B, Rousset B. Association states of tubulin in the presence and absence of microtubule-associated proteins. Analysis by electric birefringence. Biophys Chem. 1985 Oct; 22(4):307-16. PMID: 4063455.
      View in: PubMed
    130. Roux B, Sauvé R. A general solution to the time interval omission problem applied to single channel analysis. Biophys J. 1985 Jul; 48(1):149-58. PMID: 2410047.
      View in: PubMed
    131. Marion C, Hesse-Bezot C, Bezot P, Marion MJ, Roux B, Bernengo JC. The effect of histone H1 on the compaction of oligonucleosomes. A quasielastic light scattering study. Biophys Chem. 1985 Jun; 22(1-2):53-64. PMID: 4027333.
      View in: PubMed
    132. Mithieux G, Roux B, Marion C. Structural properties of barley nucleosomes. Biophys Chem. 1984 Aug; 20(1-2):111-9. PMID: 17005150.
      View in: PubMed
    133. Roche J, Marion C, Gorka C, Roux B, Lawrence JJ. Electric birefringence of chromatin reconstituted with various histone H1 subfractions. Biochem Biophys Res Commun. 1984 Jun 15; 121(2):530-7. PMID: 6732823.
      View in: PubMed
    134. Marion C, Roux B, Pallotta L, Coulet PR. Study of chromatin organization with trypsin immobilized on collagen membranes. Biochem Biophys Res Commun. 1983 Aug 12; 114(3):1169-75. PMID: 6615512.
      View in: PubMed
    135. Marion C, Roux B, Coulet PR. Role of histones H1 and H3 in the maintenance of chromatin in a compact conformation. Study with an immobilized enzyme. FEBS Lett. 1983 Jul 04; 157(2):317-21. PMID: 6862027.
      View in: PubMed
    136. Roux B, Cassoly R. Differences in the electric birefringence of spectrin dimers and tetramers as shown by the fast reversing electric pulse method. Biophys Chem. 1982 Nov; 16(3):193-8. PMID: 7171714.
      View in: PubMed
    137. Marion C, Pallotta L, Roux B. Effect of digestion with trypsin on chromatin structure. Biochem Biophys Res Commun. 1982 Oct 29; 108(4):1551-8. PMID: 7181905.
      View in: PubMed
    138. Marion C, Roux B. Flexibility of nucleosomal DNA. Biochem Biophys Res Commun. 1980 Jul 16; 95(1):27-33. PMID: 7417255.
      View in: PubMed
    139. Marion C, Roux B. Influence of histone H1 on chromatin structure. Biochem Biophys Res Commun. 1980 May 30; 94(2):535-41. PMID: 7396916.
      View in: PubMed
    140. Bernengo JC, Herbage D, Marion C, Roux B. Intermolecular interaction studies on native and enzyme-treated acid-soluble collagen. Biochim Biophys Acta. 1978 Feb 15; 532(2):305-14. PMID: 341988.
      View in: PubMed
    141. Brenna O, Roux B, Pietta PG, Pace M. Phenol-containing adsorbents for the affinity chromatography purification of some NAD(H)-dependent dehydrogenases. FEBS Lett. 1977 Apr 15; 76(2):246-9. PMID: 862905.
      View in: PubMed
    Roux's Networks
    Click the "See All" links for more information and interactive visualizations!
    Concepts Expand Description
    See all (430) concept(s)
    _
    Co-Authors Expand Description
    See all (12) people
    _
    Similar People Expand Description
    See all (60) people
    _
    Same Department Expand Description
    Search Department
    Physical Neighbors Expand Description
    _