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Joshua Weinstein

TitleAssistant Professor
InstitutionUniversity of Chicago
DepartmentMedicine-Genetic Medicine
AddressChicago IL 60637
Email
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    Improvements in the cost and speed of DNA sequencing and synthesis over the past two decades have made the dream of a technological world powered by the information storage and processing capacities of life’s molecular constituents increasingly realizable. Our lab develops technologies that apply both these advances and others in physics and computation to pressing problems in biology and medicine.

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Weinstein J. Refining the lens of DNA microscopy. Nat Comput Sci. 2024 Feb; 4(2):94-95. PMID: 38365998.
      Citations:    Fields:    
    2. Qian N, Weinstein JA. Volumetric imaging of an intact organism by a distributed molecular network. bioRxiv. 2023 Aug 14. PMID: 37645933; PMCID: PMC10462061.
      Citations:    
    3. Weinstein JA, Regev A, Zhang F. DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction. Cell. 2019 06 27; 178(1):229-241.e16. PMID: 31230717; PMCID: PMC6697087.
      Citations: 42     Fields:    Translation:HumansCells
    4. Vollmers C, Sit RV, Weinstein JA, Dekker CL, Quake SR. Genetic measurement of memory B-cell recall using antibody repertoire sequencing. Proc Natl Acad Sci U S A. 2013 Aug 13; 110(33):13463-8. PMID: 23898164; PMCID: PMC3746854.
      Citations: 133     Fields:    Translation:HumansCells
    5. Hsu PD, Scott DA, Weinstein JA, Ran FA, Konermann S, Agarwala V, Li Y, Fine EJ, Wu X, Shalem O, Cradick TJ, Marraffini LA, Bao G, Zhang F. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat Biotechnol. 2013 Sep; 31(9):827-32. PMID: 23873081; PMCID: PMC3969858.
      Citations: 2278     Fields:    Translation:Cells
    6. Weinstein JA, Zeng X, Chien YH, Quake SR. Correlation of gene expression and genome mutation in single B-cells. PLoS One. 2013; 8(6):e67624. PMID: 23840752; PMCID: PMC3695916.
      Citations: 10     Fields:    Translation:AnimalsCells
    7. Jiang N, He J, Weinstein JA, Penland L, Sasaki S, He XS, Dekker CL, Zheng NY, Huang M, Sullivan M, Wilson PC, Greenberg HB, Davis MM, Fisher DS, Quake SR. Lineage structure of the human antibody repertoire in response to influenza vaccination. Sci Transl Med. 2013 Feb 06; 5(171):171ra19. PMID: 23390249; PMCID: PMC3699344.
      Citations: 201     Fields:    Translation:HumansPHPublic Health
    8. Jiang N, Weinstein JA, Penland L, White RA, Fisher DS, Quake SR. Determinism and stochasticity during maturation of the zebrafish antibody repertoire. Proc Natl Acad Sci U S A. 2011 Mar 29; 108(13):5348-53. PMID: 21393572; PMCID: PMC3069157.
      Citations: 59     Fields:    Translation:AnimalsCells
    9. Weinstein JA, Jiang N, White RA, Fisher DS, Quake SR. High-throughput sequencing of the zebrafish antibody repertoire. Science. 2009 May 08; 324(5928):807-10. PMID: 19423829; PMCID: PMC3086368.
      Citations: 223     Fields:    Translation:AnimalsCells
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