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Samuel L. Volchenboum

TitleProfessor
InstitutionUniversity of Chicago
DepartmentPediatrics-Hematology and Oncology
AddressChicago IL 60637
Email
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    Dr. Sam Volchenboum is a Professor in the Department of Pediatrics and Associate Chief Research Informatics Officer for the Biological Sciences Division. He is the Associate Dean of Master’s Education and the Informatics Lead for the Institute for Translational Medicine. He is the Program Director for the Clinical Informatics Fellowship Program.His clinical specialty is pediatric hematology/oncology, caring for kids with cancer and diseases of the blood.

    In addition to his clinical practice, he directs the Data for the Common Good, a research group dedicated to liberating and democratizing data. Their largest project, the Pediatric Cancer Data Commons, is the world’s biggest publicly-available repository for data from children with cancer. Until 2019, Dr. Volchenboum directed the Center for Research Informatics, a 40-person group that supports biological research throughout the division. As director of this center, he oversaw high-performance computing, HIPAA-compliant storage and backup, application development to support clinical trials, development and maintenance of the clinical trials management system, the clinical research data warehouse, data analytics and visualization, and bioinformatics, including high-throughput genomic analyses and machine learning.

    Dr. Volchenboum has been on the UChicago faculty since 2007, and in 2009 he was named a St. Baldrick's Foundation Scholar. He received his PhD in molecular biology and MD from the Mayo Medical School. He completed his residency at Cincinnati Children’s Hospital Medical Center before going to Boston for his pediatric hematology/oncology fellowship at the Dana-Farber Cancer Institute and Boston Children’s Hospital. He also completed a fellowship in informatics and received his Master’s in biomedical informatics from the Massachusetts Institute of Technology.

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Espinoza AF, Bagatell R, McHugh K, Naranjo AH, Van Ryn C, Rojas Y, Lyons K, Guillerman RP, Kirby C, Brock P, Volchenboum S, Simon T, States L, Miller A, Krug B, Sarnacki S, Irtan S, Brisse HJ, Valteau-Couanet D, von Schweinitz D, Kammer B, Granata C, Pio L, Park JR, Nuchtern JG. A subset of image-defined risk factors predict completeness of resection in children with high-risk neuroblastoma: An international multicenter study. Pediatr Blood Cancer. 2024 Oct; 71(10):e31218. PMID: 39072986; PMCID: PMC11500268.
      Citations:    Fields:    Translation:Humans
    2. Wyatt KD, Alexander N, Hills GD, Liang WH, Kadauke S, Volchenboum SL, Mian A, Phillips CA. Making sense of artificial intelligence and large language models-including ChatGPT-in pediatric hematology/oncology. Pediatr Blood Cancer. 2024 Sep; 71(9):e31143. PMID: 38924670.
      Citations:    Fields:    Translation:Humans
    3. Wyatt KD, Minard-Colin V, Schleiermacher G, Willi M, Volchenboum SL. GDPR and data sharing: the Pediatric Cancer Data Commons experience. Lancet Oncol. 2024 Jun; 25(6):e227. PMID: 38821088.
      Citations:    Fields:    Translation:Humans
    4. Castellino SM, Pei Q, Zhou Y, Kelly KM, Wyatt KD, Birz S, Henderson TO, Lucas JT, Volchenboum SL, Furner B, Watkins M, Flerlage JE, Hodgkin Lymphoma Data Collaboration (NODAL) . Accelerating pediatric Hodgkin lymphoma research: the Hodgkin Lymphoma Data Collaboration (NODAL). J Natl Cancer Inst. 2024 May 08; 116(5):642-646. PMID: 38273668; PMCID: PMC11077302.
      Citations:    Fields:    Translation:Humans
    5. Furner B, Cheng A, Desai AV, Benedetti DJ, Friedman DL, Wyatt KD, Watkins M, Volchenboum SL, Cohn SL. Extracting Electronic Health Record Neuroblastoma Treatment Data With High Fidelity Using the REDCap Clinical Data Interoperability Services Module. JCO Clin Cancer Inform. 2024 May; 8:e2400009. PMID: 38815188; PMCID: PMC11371086.
      Citations:    Fields:    Translation:Humans
    6. Wyatt KD, Volchenboum SL. Targeted Enrollment in Pediatric Oncology Trials: A Vision for Just-in-Time Matching. JCO Oncol Pract. 2024 May; 20(5):603-606. PMID: 38386948.
      Citations:    Fields:    Translation:Humans
    7. Wyatt KD, Graglia L, Furner B, Kang B, Fitzsimons M, Grossman RL, Volchenboum SL. An open-source platform for pediatric cancer data exploration: a report from Data for the Common Good. JAMIA Open. 2024 Apr; 7(1):ooae004. PMID: 38304249; PMCID: PMC10833446.
      Citations:    
    8. Carlson B, Watkins M, Li M, Furner B, Cohen E, Volchenboum SL. Using A Standardized Nomenclature to Semantically Map Oncology-Related Concepts from Common Data Models to a Pediatric Cancer Data Model. AMIA Annu Symp Proc. 2023; 2023:874-883. PMID: 38222364; PMCID: PMC10785885.
      Citations:    Fields:    Translation:Humans
    9. Tilmon S, Nyenhuis S, Solomonides A, Barbarioli B, Bhargava A, Birz S, Bouzein K, Cardenas C, Carlson B, Cohen E, Dillon E, Furner B, Huang Z, Johnson J, Krishnan N, Lazenby K, Li K, Makhni S, Miler D, Ozik J, Santos C, Sleiman M, Solway J, Krishnan S, Volchenboum S. Sociome Data Commons: A scalable and sustainable platform for investigating the full social context and determinants of health. J Clin Transl Sci. 2023; 7(1):e255. PMID: 38229897; PMCID: PMC10789989.
      Citations: 1     
    10. Chennakesavalu M, Pudela C, Applebaum MA, Lee SM, Che Y, Naranjo A, Park JR, Volchenboum SL, Henderson TO, Cohn SL, Desai AV. Persistence of Racial and Ethnic Disparities in Risk and Survival for Patients with Neuroblastoma over Two Decades. EJC Paediatr Oncol. 2023 Dec; 2. PMID: 38213818; PMCID: PMC10783478.
      Citations: 2     
    11. Kaskovich S, Wyatt KD, Oliwa T, Graglia L, Furner B, Lee J, Mayampurath A, Volchenboum SL. Automated Matching of Patients to Clinical Trials: A Patient-Centric Natural Language Processing Approach for Pediatric Leukemia. JCO Clin Cancer Inform. 2023 07; 7:e2300009. PMID: 37428994; PMCID: PMC10857751.
      Citations: 1     Fields:    Translation:Humans
    12. Flores-Toro JA, Jagu S, Armstrong GT, Arons DF, Aune GJ, Chanock SJ, Hawkins DS, Heath A, Helman LJ, Janeway KA, Levine JE, Miller E, Penberthy L, Roberts CWM, Shalley ER, Shern JF, Smith MA, Staudt LM, Volchenboum SL, Zhang J, Zenklusen JC, Lowy DR, Sharpless NE, Guidry Auvil JM, Kerlavage AR, Widemann BC, Reaman GH, Kibbe WA, Doroshow JH, Childhood Cancer Data Initiative Working Groups. The Childhood Cancer Data Initiative: Using the Power of Data to Learn From and Improve Outcomes for Every Child and Young Adult With Pediatric Cancer. J Clin Oncol. 2023 08 20; 41(24):4045-4053. PMID: 37267580; PMCID: PMC10461939.
      Citations: 14     Fields:    Translation:Humans
    13. Fonseca A, Hazard FK, Gell J, Nicholls PK, Weiss RS, Klosterkemper L, Volchenboum SL, Nicholson JC, Frazier AL, Amatruda JF, Bagrodia A, Lockley M, Murray MJ, Lobo J. Advancing clinical and translational research in germ cell tumours (GCT): recommendations from the Malignant Germ Cell International Consortium. Br J Cancer. 2022 11; 127(9):1577-1583. PMID: 36229581; PMCID: PMC9596690.
      Citations: 3     Fields:    Translation:Humans
    14. Arshad A, Blandon C, Carey K, Verhoef P, Jani P, Volchenboum S, Churpek M, Mayampurath A. Association Between Critical Events in the PICU and Outcomes in Neighboring Patients. Crit Care Explor. 2022 Oct; 4(10):e0765. PMID: 36248315; PMCID: PMC9553377.
      Citations: 1     
    15. Mayampurath A, Ajith A, Anderson-Smits C, Chang SC, Brouwer E, Johnson J, Baltasi M, Volchenboum S, Devercelli G, Ciaccio CE. Early Diagnosis of Primary Immunodeficiency Disease Using Clinical Data and Machine Learning. J Allergy Clin Immunol Pract. 2022 11; 10(11):3002-3007.e5. PMID: 36108921.
      Citations: 6     Fields:    Translation:Humans
    16. Wyatt KD, Birz S, Hawkins DS, Minard-Colin V, Rodeberg DA, Bisogno G, De Salvo GL, Wolden SL, Xue W, Volchenboum SL, INternational Soft Tissue SaRcoma ConsorTium (INSTRuCT), Sparber-Sauer M, Koscielniak E, Ebinger M, Merks JHM. Creating a data commons: The INternational Soft Tissue SaRcoma ConsorTium (INSTRuCT). Pediatr Blood Cancer. 2022 11; 69(11):e29924. PMID: 35969120; PMCID: PMC9560864.
      Citations: 4     Fields:    Translation:Humans
    17. Hettmer S, Linardic CM, Kelsey A, Rudzinski ER, Vokuhl C, Selfe J, Ruhen O, Shern JF, Khan J, Kovach AR, Lupo PJ, Gatz SA, Volchenboum S, Hawkins DS, Bisogno G, Venkatramani R, Shipley J, Schäfer BW, Minard-Colin V, Koscielniak E, Sparber-Sauer M, Merks JHM. Molecular testing of rhabdomyosarcoma in clinical trials to improve risk stratification and outcome: A consensus view from European paediatric Soft tissue sarcoma Study Group, Children's Oncology Group and Cooperative Weichteilsarkom-Studiengruppe. Eur J Cancer. 2022 09; 172:367-386. PMID: 35839732.
      Citations: 16     Fields:    Translation:Humans
    18. Church AJ, Corson LB, Kao PC, Imamovic-Tuco A, Reidy D, Doan D, Kang W, Pinto N, Maese L, Laetsch TW, Kim A, Colace SI, Macy ME, Applebaum MA, Bagatell R, Sabnis AJ, Weiser DA, Glade-Bender JL, Homans AC, Hipps J, Harris H, Manning D, Al-Ibraheemi A, Li Y, Gupta H, Cherniack AD, Lo YC, Strand GR, Lee LA, Pinches RS, Lazo De La Vega L, Harden MV, Lennon NJ, Choi S, Comeau H, Harris MH, Forrest SJ, Clinton CM, Crompton BD, Kamihara J, MacConaill LE, Volchenboum SL, Lindeman NI, Van Allen E, DuBois SG, London WB, Janeway KA. Molecular profiling identifies targeted therapy opportunities in pediatric solid cancer. Nat Med. 2022 08; 28(8):1581-1589. PMID: 35739269; PMCID: PMC10953704.
      Citations: 10     Fields:    Translation:Humans
    19. Major A, Palese M, Ermis E, James A, Klussmann FA, Hessissen L, Geel J, Khan MS, Dalvi R, Sullivan M, Kearns P, Frazier AL, Pritchard-Jones K, Nakagawara A, Rodriguez-Galindo C, Volchenboum SL, Villarroel M. Mapping Pediatric Oncology Clinical Trial Collaborative Groups on the Global Stage. JCO Glob Oncol. 2022 02; 8:e2100266. PMID: 35157510; PMCID: PMC8853619.
      Citations: 3     Fields:    Translation:Humans
    20. Schienda J, Church AJ, Corson LB, Decker B, Clinton CM, Manning DK, Imamovic-Tuco A, Reidy D, Strand GR, Applebaum MA, Bagatell R, DuBois SG, Glade-Bender JL, Kang W, Kim A, Laetsch TW, Macy ME, Maese L, Pinto N, Sabnis AJ, Schiffman JD, Colace SI, Volchenboum SL, Weiser DA, Nowak JA, Lindeman NI, Janeway KA, Crompton BD, Kamihara J. Germline Sequencing Improves Tumor-Only Sequencing Interpretation in a Precision Genomic Study of Patients With Pediatric Solid Tumor. JCO Precis Oncol. 2021; 5. PMID: 34964003; PMCID: PMC8710335.
      Citations: 6     Fields:    Translation:Humans
    21. Mayampurath A, Ramesh S, Michael D, Liu L, Feinberg N, Granger M, Naranjo A, Cohn SL, Volchenboum SL, Applebaum MA. Predicting Response to Chemotherapy in Patients With Newly Diagnosed High-Risk Neuroblastoma: A Report From the International Neuroblastoma Risk Group. JCO Clin Cancer Inform. 2021 12; 5:1181-1188. PMID: 34882497; PMCID: PMC8812615.
      Citations: 4     Fields:    Translation:Humans
    22. Ramesh S, Chokkara S, Shen T, Major A, Volchenboum SL, Mayampurath A, Applebaum MA. Applications of Artificial Intelligence in Pediatric Oncology: A Systematic Review. JCO Clin Cancer Inform. 2021 12; 5:1208-1219. PMID: 34910588; PMCID: PMC8812636.
      Citations: 7     Fields:    Translation:Humans
    23. Plana A, Furner B, Palese M, Dussault N, Birz S, Graglia L, Kush M, Nicholson J, Rasche M, Bisogno G, Reinhardt D, Frazier AL, Janeway K, S Hawkins D, Kolb EA, Cohn SL, Pearson ADJ, Volchenboum SL, Hecker-Nolting S, Gaspar N, Zwaan CM, Koscielniak E. Pediatric Cancer Data Commons: Federating and Democratizing Data for Childhood Cancer Research. JCO Clin Cancer Inform. 2021 09; 5:1034-1043. PMID: 34662145.
      Citations: 15     Fields:    Translation:Humans
    24. Lipschultz E, Danahey K, Truong TM, Schierer E, Volchenboum SL, Ratain MJ, O'Donnell PH. Creation of a pharmacogenomics patient portal complementary to an existing institutional provider-facing clinical decision support system. JAMIA Open. 2021 Jul; 4(3):ooab067. PMID: 34458686; PMCID: PMC8390782.
      Citations: 3     
    25. Kerlavage AR, Kirchhoff AC, Guidry Auvil JM, Sharpless NE, Davis KL, Reilly K, Reaman G, Penberthy L, Deapen D, Hwang A, Durbin EB, Gallotto SL, Aplenc R, Volchenboum SL, Heath AP, Aronow BJ, Zhang J, Vaske O, Alonzo TA, Nathan PC, Poynter JN, Armstrong G, Hahn EE, Wernli KJ, Greene C, DiGiovanna J, Resnick AC, Shalley ER, Nadaf S, Kibbe WA. Cancer Informatics for Cancer Centers: Scientific Drivers for Informatics, Data Science, and Care in Pediatric, Adolescent, and Young Adult Cancer. JCO Clin Cancer Inform. 2021 08; 5:881-896. PMID: 34428097; PMCID: PMC8763339.
      Citations: 2     Fields:    Translation:HumansCellsPHPublic Health
    26. Balyasny S, Lee SM, Desai AV, Volchenboum SL, Naranjo A, Park JR, London WB, Cohn SL, Applebaum MA. Association Between Participation in Clinical Trials and Overall Survival Among Children With Intermediate- or High-risk Neuroblastoma. JAMA Netw Open. 2021 07 01; 4(7):e2116248. PMID: 34236408; PMCID: PMC8267607.
      Citations: 1     Fields:    Translation:Humans
    27. Bao R, Spranger S, Hernandez K, Zha Y, Pytel P, Luke JJ, Gajewski TF, Volchenboum SL, Cohn SL, Desai AV. Immunogenomic determinants of tumor microenvironment correlate with superior survival in high-risk neuroblastoma. J Immunother Cancer. 2021 07; 9(7). PMID: 34272305; PMCID: PMC8287618.
      Citations: 18     Fields:    Translation:Humans
    28. Miller R, Coyne E, Crowgey EL, Eckrich D, Myers JC, Villanueva R, Wadman J, Jacobs-Allen S, Gresh R, Volchenboum SL, Kolb EA. Implementation of a learning healthcare system for sickle cell disease. JAMIA Open. 2020 Oct; 3(3):349-359. PMID: 33215070; PMCID: PMC7660956.
      Citations: 6     
    29. Liang WH, Federico SM, London WB, Naranjo A, Irwin MS, Volchenboum SL, Cohn SL. Tailoring Therapy for Children With Neuroblastoma on the Basis of Risk Group Classification: Past, Present, and Future. JCO Clin Cancer Inform. 2020 10; 4:895-905. PMID: 33058692; PMCID: PMC7608590.
      Citations: 38     Fields:    Translation:Humans
    30. Sokol E, Desai AV, Applebaum MA, Valteau-Couanet D, Park JR, Pearson ADJ, Schleiermacher G, Irwin MS, Hogarty M, Naranjo A, Volchenboum S, Cohn SL, London WB. Reply to K. Beiske et al. J Clin Oncol. 2020 11 01; 38(31):3720-3721. PMID: 32931402.
      Citations:    Fields:    Translation:Humans
    31. Ci B, Yang DM, Krailo M, Xia C, Yao B, Luo D, Zhou Q, Xiao G, Xu L, Skapek SX, Murray MM, Amatruda JF, Klosterkemper L, Shaikh F, Faure-Conter C, Fresneau B, Volchenboum SL, Stoneham S, Lopes LF, Nicholson J, Frazier AL, Xie Y. Development of a Data Model and Data Commons for Germ Cell Tumors. JCO Clin Cancer Inform. 2020 06; 4:555-566. PMID: 32568554; PMCID: PMC7328105.
      Citations: 2     Fields:    Translation:Humans
    32. Sokol E, Desai AV, Applebaum MA, Valteau-Couanet D, Park JR, Pearson ADJ, Schleiermacher G, Irwin MS, Hogarty M, Naranjo A, Volchenboum S, Cohn SL, London WB. Age, Diagnostic Category, Tumor Grade, and Mitosis-Karyorrhexis Index Are Independently Prognostic in Neuroblastoma: An INRG Project. J Clin Oncol. 2020 06 10; 38(17):1906-1918. PMID: 32315273; PMCID: PMC7280049.
      Citations: 35     Fields:    Translation:Humans
    33. Major A, Cox SM, Volchenboum SL. Using big data in pediatric oncology: Current applications and future directions. Semin Oncol. 2020 02; 47(1):56-64. PMID: 32229032; PMCID: PMC9036548.
      Citations: 11     Fields:    Translation:HumansPHPublic Health
    34. Hernandez W, Danahey K, Pei X, Yeo KJ, Leung E, Volchenboum SL, Ratain MJ, Meltzer DO, Stranger BE, Perera MA, O'Donnell PH. Pharmacogenomic genotypes define genetic ancestry in patients and enable population-specific genomic implementation. Pharmacogenomics J. 2020 02; 20(1):126-135. PMID: 31506565; PMCID: PMC7184888.
      Citations: 10     Fields:    Translation:Humans
    35. Oliwa T, Maron SB, Chase LM, Lomnicki S, Catenacci DVT, Furner B, Volchenboum SL. Obtaining Knowledge in Pathology Reports Through a Natural Language Processing Approach With Classification, Named-Entity Recognition, and Relation-Extraction Heuristics. JCO Clin Cancer Inform. 2019 08; 3:1-8. PMID: 31365274; PMCID: PMC6873953.
      Citations: 10     Fields:    Translation:Humans
    36. Fukushima M, Austin C, Sato N, Maruyama T, Navarro E, Rocca M, Demotes J, Haendel M, Volchenboum SL, Cowperthwaite M, Silverstein JC, Webb C, Sim I, Chase M, Speakman J, Augustine E, Ford DE, Kush R. The Global academic research organization network: Data sharing to cure diseases and enable learning health systems. Learn Health Syst. 2019 Jan; 3(1):e10073. PMID: 31245596; PMCID: PMC6508835.
      Citations: 6     
    37. Cox SM, Lane A, Volchenboum SL. Use of Wearable, Mobile, and Sensor Technology in Cancer Clinical Trials. JCO Clin Cancer Inform. 2018 12; 2:1-11. PMID: 30652590.
      Citations: 35     Fields:    Translation:Humans
    38. Sokol EA, Engelmann R, Kang W, Pinto N, Starkey A, Lai H, Nadel H, Shulkin BL, Pu Y, Appelbaum D, Yanik GA, Cohn SL, Armato SG, Volchenboum S. Computer-assisted Curie scoring for metaiodobenzylguanidine (MIBG) scans in patients with neuroblastoma. Pediatr Blood Cancer. 2018 12; 65(12):e27417. PMID: 30198643; PMCID: PMC6317352.
      Citations: 2     Fields:    Translation:Humans
    39. Mayampurath A, Volchenboum SL, Sanchez-Pinto LN. Using photoplethysmography data to estimate heart rate variability and its association with organ dysfunction in pediatric oncology patients. NPJ Digit Med. 2018; 1:29. PMID: 31304311; PMCID: PMC6550162.
      Citations: 9     
    40. Rajkomar A, Oren E, Chen K, Dai AM, Hajaj N, Hardt M, Liu PJ, Liu X, Marcus J, Sun M, Sundberg P, Yee H, Zhang K, Zhang Y, Flores G, Duggan GE, Irvine J, Le Q, Litsch K, Mossin A, Tansuwan J, Wexler J, Wilson J, Ludwig D, Volchenboum SL, Chou K, Pearson M, Madabushi S, Shah NH, Butte AJ, Howell MD, Cui C, Corrado GS, Dean J. Scalable and accurate deep learning with electronic health records. NPJ Digit Med. 2018; 1:18. PMID: 31304302; PMCID: PMC6550175.
      Citations: 615     
    41. Kang W, Kadri S, Puranik R, Wurst MN, Patil SA, Mujacic I, Benhamed S, Niu N, Zhen CJ, Ameti B, Long BC, Galbo F, Montes D, Iracheta C, Gamboa VL, Lopez D, Yourshaw M, Lawrence CA, Aisner DL, Fitzpatrick C, McNerney ME, Wang YL, Andrade J, Volchenboum SL, Furtado LV, Ritterhouse LL, Segal JP. System for Informatics in the Molecular Pathology Laboratory: An Open-Source End-to-End Solution for Next-Generation Sequencing Clinical Data Management. J Mol Diagn. 2018 07; 20(4):522-532. PMID: 29698836; PMCID: PMC6039793.
      Citations: 4     Fields:    Translation:Humans
    42. Hungate EA, Applebaum MA, Skol AD, Vaksman Z, Diamond M, McDaniel L, Volchenboum SL, Stranger BE, Maris JM, Diskin SJ, Onel K, Cohn SL. Evaluation of Genetic Predisposition for MYCN-Amplified Neuroblastoma. J Natl Cancer Inst. 2017 10 01; 109(10). PMID: 29117357; PMCID: PMC6279278.
      Citations: 14     Fields:    Translation:Humans
    43. Danahey K, Borden BA, Furner B, Yukman P, Hussain S, Saner D, Volchenboum SL, Ratain MJ, O'Donnell PH. Simplifying the use of pharmacogenomics in clinical practice: Building the genomic prescribing system. J Biomed Inform. 2017 Nov; 75:110-121. PMID: 28963061.
      Citations: 18     Fields:    Translation:Humans
    44. O'Donnell PH, Wadhwa N, Danahey K, Borden BA, Lee SM, Hall JP, Klammer C, Hussain S, Siegler M, Sorrentino MJ, Davis AM, Sacro YA, Nanda R, Polonsky TS, Koyner JL, Burnet DL, Lipstreuer K, Rubin DT, Mulcahy C, Strek ME, Harper W, Cifu AS, Polite B, Patrick-Miller L, Yeo KT, Leung E, Volchenboum SL, Altman RB, Olopade OI, Stadler WM, Meltzer DO, Ratain MJ. Pharmacogenomics-Based Point-of-Care Clinical Decision Support Significantly Alters Drug Prescribing. Clin Pharmacol Ther. 2017 Nov; 102(5):859-869. PMID: 28398598; PMCID: PMC5636653.
      Citations: 32     Fields:    Translation:Humans
    45. Volchenboum SL, Cox SM, Heath A, Resnick A, Cohn SL, Grossman R. Data Commons to Support Pediatric Cancer Research. Am Soc Clin Oncol Educ Book. 2017; 37:746-752. PMID: 28561664.
      Citations: 21     Fields:    Translation:Humans
    46. Volchenboum SL, Mayampurath A, Edelson DP, Howell MD, Churpek MM, Göksu-Gürsoy G. Association Between In-Hospital Critical Illness Events and Outcomes in Patients on the Same Ward. JAMA. 2016 12 27; 316(24):2674-2675. PMID: 28027358; PMCID: PMC5697719.
      Citations: 19     Fields:    Translation:HumansPHPublic Health
    47. Applebaum MA, Vaksman Z, Lee SM, Hungate EA, Henderson TO, London WB, Pinto N, Volchenboum SL, Park JR, Naranjo A, Hero B, Pearson AD, Stranger BE, Cohn SL, Diskin SJ. Neuroblastoma survivors are at increased risk for second malignancies: A report from the International Neuroblastoma Risk Group Project. Eur J Cancer. 2017 02; 72:177-185. PMID: 28033528; PMCID: PMC5258837.
      Citations: 33     Fields:    Translation:HumansCells
    48. Eckert MA, Pan S, Hernandez KM, Loth RM, Andrade J, Volchenboum SL, Faber P, Montag A, Lastra R, Peter ME, Yamada SD, Lengyel E. Genomics of Ovarian Cancer Progression Reveals Diverse Metastatic Trajectories Including Intraepithelial Metastasis to the Fallopian Tube. Cancer Discov. 2016 12; 6(12):1342-1351. PMID: 27856443; PMCID: PMC5164915.
      Citations: 98     Fields:    Translation:HumansCells
    49. Lyon SM, Mayampurath A, Rogers MR, Wolfgeher DJ, Fisher SM, Volchenboum SL, He TC, Reid RR. A method for whole protein isolation from human cranial bone. Anal Biochem. 2016 Dec 15; 515:33-39. PMID: 27677936; PMCID: PMC5584578.
      Citations: 7     Fields:    Translation:HumansAnimals
    50. Morgenstern DA, London WB, Stephens D, Volchenboum SL, Nakagawara A, Shimada H, Matthay KK, Cohn SL, Pearson AD, Irwin MS, Simon T, Schleiermacher G. Prognostic significance of pattern and burden of metastatic disease in patients with stage 4 neuroblastoma: A study from the International Neuroblastoma Risk Group database. Eur J Cancer. 2016 09; 65:1-10. PMID: 27434878.
      Citations: 30     Fields:    Translation:Humans
    51. Villablanca JG, Volchenboum SL, Cho H, Kang MH, Cohn SL, Anderson CP, Marachelian A, Groshen S, Tsao-Wei D, Matthay KK, Maris JM, Hasenauer CE, Czarnecki S, Lai H, Goodarzian F, Shimada H, Reynolds CP. A Phase I New Approaches to Neuroblastoma Therapy Study of Buthionine Sulfoximine and Melphalan With Autologous Stem Cells for Recurrent/Refractory High-Risk Neuroblastoma. Pediatr Blood Cancer. 2016 08; 63(8):1349-56. PMID: 27092812; PMCID: PMC8992729.
      Citations: 35     Fields:    Translation:HumansCellsCTClinical Trials
    52. Bagatell R, McHugh K, Naranjo A, Van Ryn C, Kirby C, Brock P, Lyons KA, States LJ, Rojas Y, Miller A, Volchenboum SL, Simon T, Krug B, Sarnacki S, Valteau-Couanet D, von Schweinitz D, Kammer B, Granata C, Pio L, Park JR, Nuchtern J. Assessment of Primary Site Response in Children With High-Risk Neuroblastoma: An International Multicenter Study. J Clin Oncol. 2016 Mar 01; 34(7):740-6. PMID: 26755515; PMCID: PMC4872026.
      Citations: 17     Fields:    Translation:Humans
    53. Padula WV, Blackshaw L, Brindle CT, Volchenboum SL. An Approach to Acquiring, Normalizing, and Managing EHR Data From a Clinical Data Repository for Studying Pressure Ulcer Outcomes. J Wound Ostomy Continence Nurs. 2016 Jan-Feb; 43(1):39-45. PMID: 26727681.
      Citations: 5     Fields:    Translation:Humans
    54. Rosebeck S, Alonge MM, Kandarpa M, Mayampurath A, Volchenboum SL, Jasielec J, Dytfeld D, Maxwell SP, Kraftson SJ, McCauley D, Shacham S, Kauffman M, Jakubowiak AJ. Synergistic Myeloma Cell Death via Novel Intracellular Activation of Caspase-10-Dependent Apoptosis by Carfilzomib and Selinexor. Mol Cancer Ther. 2016 Jan; 15(1):60-71. PMID: 26637366.
      Citations: 29     Fields:    Translation:HumansAnimalsCells
    55. Pinto NR, Applebaum MA, Volchenboum SL, Matthay KK, London WB, Ambros PF, Nakagawara A, Berthold F, Schleiermacher G, Park JR, Valteau-Couanet D, Pearson AD, Cohn SL. Advances in Risk Classification and Treatment Strategies for Neuroblastoma. J Clin Oncol. 2015 Sep 20; 33(27):3008-17. PMID: 26304901; PMCID: PMC4567703.
      Citations: 388     Fields:    Translation:Humans
    56. Bao R, Hernandez K, Huang L, Kang W, Bartom E, Onel K, Volchenboum S, Andrade J. ExScalibur: A High-Performance Cloud-Enabled Suite for Whole Exome Germline and Somatic Mutation Identification. PLoS One. 2015; 10(8):e0135800. PMID: 26271043; PMCID: PMC4535852.
      Citations: 8     Fields:    Translation:Humans
    57. Pinto N, Volchenboum SL, Skol AD, Rhodes L, Doan A, Fein-Levy C, Lipton JM, Cunningham JM, Onel K. Establishing a translational genomics infrastructure in pediatric cancer: the GREAT KIDS experience. Per Med. 2015 Jun; 12(3):221-229. PMID: 29771652.
      Citations: 1     Fields:    
    58. Volchenboum SL, Andrade J, Huang L, Barkauskas DA, Krailo M, Womer RB, Ranft A, Potratz J, Dirksen U, Triche TJ, Lawlor ER. Gene Expression Profiling of Ewing Sarcoma Tumors Reveals the Prognostic Importance of Tumor-Stromal Interactions: A Report from the Children's Oncology Group. J Pathol Clin Res. 2015 Apr; 1(2):83-94. PMID: 26052443; PMCID: PMC4457396.
      Citations: 49     Fields:    
    59. Dytfeld D, Rosebeck S, Kandarpa M, Mayampurath A, Mellacheruvu D, Alonge MM, Ngoka L, Jasielec J, Richardson PG, Volchenboum S, Nesvizhskii AI, Sreekumar A, Jakubowiak AJ. Proteomic profiling of naïve multiple myeloma patient plasma cells identifies pathways associated with favourable response to bortezomib-based treatment regimens. Br J Haematol. 2015 Jul; 170(1):66-79. PMID: 25824111.
      Citations: 12     Fields:    Translation:HumansCellsCTClinical Trials
    60. Hu Y, Mayampurath A, Khan S, Cohen JK, Mechref Y, Volchenboum SL. N-linked glycan profiling in neuroblastoma cell lines. J Proteome Res. 2015 May 01; 14(5):2074-81. PMID: 25730103; PMCID: PMC4516140.
      Citations: 18     Fields:    Translation:HumansCells
    61. Truman AW, Kristjansdottir K, Wolfgeher D, Mayampurath A, Volchenboum SL, Kron SJ, Ricco N, Clotet J. The quantitative changes in the yeast Hsp70 and Hsp90 interactomes upon DNA damage. Data Brief. 2015 Mar; 2:12-5. PMID: 26217697; PMCID: PMC4459869.
      Citations: 11     
    62. Truman AW, Kristjansdottir K, Wolfgeher D, Mayampurath A, Volchenboum SL, Kron SJ, Ricco N, Clotet J. Quantitative proteomics of the yeast Hsp70/Hsp90 interactomes during DNA damage reveal chaperone-dependent regulation of ribonucleotide reductase. J Proteomics. 2015 Jan 01; 112:285-300. PMID: 25452130; PMCID: PMC4485990.
      Citations: 27     Fields:    Translation:HumansAnimalsCells
    63. Applebaum MA, Henderson TO, Lee SM, Pinto N, Volchenboum SL, Cohn SL. Second malignancies in patients with neuroblastoma: the effects of risk-based therapy. Pediatr Blood Cancer. 2015 Jan; 62(1):128-33. PMID: 25251613; PMCID: PMC4237647.
      Citations: 26     Fields:    Translation:HumansPHPublic Health
    64. Kho AN, Hynes DM, Goel S, Solomonides AE, Price R, Hota B, Sims SA, Bahroos N, Angulo F, Trick WE, Tarlov E, Rachman FD, Hamilton A, Kaleba EO, Badlani S, Volchenboum SL, Silverstein JC, Tobin JN, Schwartz MA, Levine D, Wong JB, Kennedy RH, Krishnan JA, Meltzer DO, Collins JM, Mazany T, CAPriCORN Team. CAPriCORN: Chicago Area Patient-Centered Outcomes Research Network. J Am Med Inform Assoc. 2014 Jul-Aug; 21(4):607-11. PMID: 24821736; PMCID: PMC4078298.
      Citations: 32     Fields:    Translation:Humans
    65. London WB, Stephens D, Volchenboum SL, Hero B, Di Cataldo A, Nakagawara A, Shimada H, Ambros PF, Matthay KK, Cohn SL, Pearson AD, Irwin MS, Morgenstern DA. Metastatic neuroblastoma confined to distant lymph nodes (stage 4N) predicts outcome in patients with stage 4 disease: A study from the International Neuroblastoma Risk Group Database. J Clin Oncol. 2014 Apr 20; 32(12):1228-35. PMID: 24663047; PMCID: PMC4876342.
      Citations: 18     Fields:    Translation:HumansCTClinical Trials
    66. Wilson RA, Teng L, Bachmeyer KM, Bissonnette ML, Husain AN, Parham DM, Triche TJ, Wing MR, Gastier-Foster JM, Barr FG, Hawkins DS, Anderson JR, Skapek SX, Volchenboum SL. A novel algorithm for simplification of complex gene classifiers in cancer. Cancer Res. 2013 Sep 15; 73(18):5625-32. PMID: 23913937; PMCID: PMC4233649.
      Citations: 3     Fields:    Translation:Humans
    67. Mandal S, Baron BW, Mischeaux M, James K, Roig J, Landers J, Volchenboum SL, Cunningham JM, Reardon B, Musa G, Richa EM. Collection of peripheral blood stem cells from a 7 month-old girl weighing 7 kg with the use of combined heparin and citrate anticoagulation. J Clin Apher. 2013 Aug; 28(4):309-10. PMID: 23881772.
      Citations:    Fields:    Translation:HumansCells
    68. Wang W, Zhong Q, Teng L, Bhatnagar N, Sharma B, Zhang X, Luther W, Haynes LP, Burgoyne RD, Vidal M, Volchenboum S, Hill DE, George RE. Mutations that disrupt PHOXB interaction with the neuronal calcium sensor HPCAL1 impede cellular differentiation in neuroblastoma. Oncogene. 2014 Jun 19; 33(25):3316-24. PMID: 23873030; PMCID: PMC4040330.
      Citations: 18     Fields:    Translation:HumansCells
    69. Kirby C, Ambros PF, Billiter D, London WB, Mendonca E, Monclair T, Pearson AD, Cohn SL, Volchenboum SL. Development of an open-source, flexible framework for complex inter-institutional disparate data sharing and collaboration. AMIA Jt Summits Transl Sci Proc. 2013; 2013:103. PMID: 24303312.
      Citations: 1     
    70. Morales La Madrid A, Volchenboum S, Gastier-Foster JM, Pyatt R, Liu D, Pytel P, Lavarino C, Rodriguez E, Cohn SL. Locoregional MYCN-amplified neuroblastoma. Pediatr Blood Cancer. 2012 Oct; 59(4):736-8. PMID: 22213566.
      Citations:    Fields:    Translation:Humans
    71. Lu Z, Cheng Z, Zhao Y, Volchenboum SL. Bioinformatic analysis and post-translational modification crosstalk prediction of lysine acetylation. PLoS One. 2011; 6(12):e28228. PMID: 22164248; PMCID: PMC3229533.
      Citations: 26     Fields:    Translation:HumansAnimalsCells
    72. McNerney ME, Baron BW, Volchenboum SL, Papari M, Keith M, Williams K, Richa E. Development of warm auto- and allo-antibodies in a 3-year old boy with sickle cell haemoglobinopathy following his first transfusion of a single unit of red blood cells. Blood Transfus. 2010 Apr; 8(2):126-8. PMID: 20383307; PMCID: PMC2851217.
      Citations: 2     Fields:    Translation:HumansPHPublic Health
    73. Volchenboum SL, Cohn SL. Are molecular neuroblastoma classifiers ready for prime time? Lancet Oncol. 2009 Jul; 10(7):641-2. PMID: 19573794.
      Citations: 1     Fields:    Translation:Humans
    74. Volchenboum SL, Li C, Li S, Attiyeh EF, Reynolds CP, Maris JM, Look AT, George RE. Comparison of primary neuroblastoma tumors and derivative early-passage cell lines using genome-wide single nucleotide polymorphism array analysis. Cancer Res. 2009 May 15; 69(10):4143-9. PMID: 19435921; PMCID: PMC2739280.
      Citations: 13     Fields:    Translation:HumansCells
    75. Volchenboum SL, Kristjansdottir K, Wolfgeher D, Kron SJ. Rapid validation of Mascot search results via stable isotope labeling, pair picking, and deconvolution of fragmentation patterns. Mol Cell Proteomics. 2009 Aug; 8(8):2011-22. PMID: 19435713; PMCID: PMC2722775.
      Citations: 5     Fields:    
    76. Volchenboum SL, Cohn SL. Progress in defining and treating high-risk neuroblastoma: lessons from the bench and bedside. J Clin Oncol. 2009 Mar 01; 27(7):1003-4. PMID: 19171702.
      Citations: 11     Fields:    Translation:Humans
    77. Hartford C, Volchenboum SL, Cohn SL. 3 + 3 not equal to (Rolling) 6. J Clin Oncol. 2008 Jan 10; 26(2):170-1. PMID: 18182656.
      Citations: 5     Fields:    Translation:Humans
    78. Volchenboum SL, Mohsen AW, Kim JJ, Vockley J. Arginine 387 of human isovaleryl-CoA dehydrogenase plays a crucial role in substrate/product binding. Mol Genet Metab. 2001 Sep-Oct; 74(1-2):226-37. PMID: 11592819.
      Citations: 2     Fields:    Translation:HumansCells
    79. Volchenboum SL, Vockley J. Mitochondrial import and processing of wild type and type III mutant isovaleryl-CoA dehydrogenase. J Biol Chem. 2000 Mar 17; 275(11):7958-63. PMID: 10713113.
      Citations: 5     Fields:    Translation:HumansCells
    80. Mohsen AW, Anderson BD, Volchenboum SL, Battaile KP, Tiffany K, Roberts D, Kim JJ, Vockley J. Characterization of molecular defects in isovaleryl-CoA dehydrogenase in patients with isovaleric acidemia. Biochemistry. 1998 Jul 14; 37(28):10325-35. PMID: 9665741.
      Citations: 22     Fields:    Translation:HumansAnimalsCells
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