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overview Humans and other mammals are colonized by complex populations of microbes that constitute the microbiota. Some commensal bacteria enhance immune defenses by inducing host expression of antimicrobial factors while others secrete antimicrobial molecules that inhibit pathogens. We study interactions between pathogenic and beneficial bacteria and their mammalian hosts. Our laboratory’s research focuses on a wide range of commensal bacteria that have been characterized at the genomic, proteomic and metabolomic level and we are using gnotobiotic mice to test assembled commensal consortia for their ability to enhance resistance against pathogenic bacteria. Using these platforms, we have identified multiple novel mechanisms of antimicrobial resistance that can be exploited to reduce the risk of infection by highly antibiotic-resistant pathogens. Our laboratory has worked closely with clinical groups to investigate the role of the microbiota in clinical outcomes. We have demonstrated that loss of microbiota diversity during allogeneic hematopoietic cell transplantation adversely impacts outcomes and have investigated the impact of microbiota composition on the risk of developing colitis during checkpoint blockade cancer immunotherapy.
One or more keywords matched the following items that are connected to Pamer, Eric
Item TypeName
Concept Carboxypeptidases
Concept Carcinoma, Papillary
Concept Cell Line, Transformed
Concept Carcinoma
Concept Antigens, Differentiation, T-Lymphocyte
Concept Antigens, T-Independent
Concept Bayes Theorem
Concept Bacterial Toxins
Concept Biological Therapy
Concept Combined Modality Therapy
Concept Carrier State
Concept Diabetes Mellitus, Type 1
Concept DNA Transposable Elements
Concept Cytotoxicity Tests, Immunologic
Concept Delivery of Health Care
Concept Diphtheria Toxin
Concept Drug Therapy, Combination
Concept Immune Tolerance
Concept Histocompatibility Testing
Concept Fluorescent Antibody Technique
Concept Lymphocyte Culture Test, Mixed
Concept Mice, Transgenic
Concept Models, Theoretical
Concept Neoplasm Transplantation
Concept Nerve Tissue Proteins
Concept Mycobacterium tuberculosis
Concept Hot Temperature
Concept Kidney Function Tests
Concept Microbial Sensitivity Tests
Concept Microbiological Techniques
Concept Trypanosoma brucei brucei
Concept Respiratory Tract Infections
Concept Gene Rearrangement, beta-Chain T-Cell Antigen Receptor
Concept Carbapenems
Concept Bone Marrow Transplantation
Concept Time Factors
Concept Trichosporon
Concept Therapeutics
Concept Time
Concept Tissue Donors
Concept Interferon Type I
Concept Biomarkers, Tumor
Concept Tumor Necrosis Factor-alpha
Concept Transplantation, Heterologous
Concept Hematopoietic Stem Cell Transplantation
Concept Th1 Cells
Concept Reverse Transcriptase Polymerase Chain Reaction
Concept Tumor Cells, Cultured
Concept Kidney Transplantation
Concept Genes, Wilms Tumor
Concept Receptors, Antigen, T-Cell, gamma-delta
Concept CD4-Positive T-Lymphocytes
Concept Stem Cell Transplantation
Concept Tacrolimus
Concept Liver Transplantation
Concept T-Lymphocyte Subsets
Concept Receptors, Antigen, T-Cell, alpha-beta
Concept Treatment Outcome
Concept CD8-Positive T-Lymphocytes
Concept Transplantation Conditioning
Concept Basic-Leucine Zipper Transcription Factors
Concept Toll-Like Receptor 5
Concept Epitopes, T-Lymphocyte
Concept Toll-Like Receptor 1
Concept Toll-Like Receptor 6
Concept Fluorescent Antibody Technique, Direct
Concept Tumor Escape
Concept Adoptive Transfer
Concept Precipitin Tests
Concept Transplantation
Concept Triazoles
Concept Nitric Oxide Synthase Type II
Concept High-Throughput Nucleotide Sequencing
Concept Real-Time Polymerase Chain Reaction
Concept Tumor Necrosis Factors
Concept Tuberculosis, Pulmonary
Concept Adaptor Proteins, Signal Transducing
Concept T-Lymphocytes, Cytotoxic
Concept Temperature
Concept Toll-Like Receptor 4
Concept Thyroid Neoplasms
Concept Transfection
Concept Urinary Tract Infections
Concept Electrophoresis, Gel, Two-Dimensional
Concept Transplantation Chimera
Concept ATP-Binding Cassette Transporters
Concept Graft vs Tumor Effect
Concept Carcinoma, Pancreatic Ductal
Concept T-Lymphocytes, Regulatory
Concept Toll-Like Receptor 7
Concept Transcriptome
Concept Tumor Microenvironment
Concept Lectins, C-Type
Concept Nanotubes, Carbon
Concept Cell Line, Tumor
Concept Toll-Like Receptors
Concept Natural Cytotoxicity Triggering Receptor 1
Concept Gene Knock-In Techniques
Concept Th17 Cells
Concept Carbohydrates
Concept Carrier Proteins
Concept Clinical Trials as Topic
Concept Genetic Testing
Concept Predictive Value of Tests
Concept Receptors, Antigen, T-Cell
Concept T-Lymphocytes
Concept Thymus Gland
Concept Transplantation, Autologous
Concept Transplantation, Homologous
Concept Tuberculosis
Concept Signal Transduction
Concept Coculture Techniques
Concept Adaptor Proteins, Vesicular Transport
Concept Gastrointestinal Tract
Concept Multilocus Sequence Typing
Academic Article Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness.
Academic Article Intestinal Microbiota and Relapse After Hematopoietic-Cell Transplantation.
Academic Article Genome-Wide Screening for Enteric Colonization Factors in Carbapenem-Resistant ST258 Klebsiella pneumoniae.
Academic Article Differing roles of inflammation and antigen in T cell proliferation and memory generation.
Academic Article Familial transmission rather than defective innate immunity shapes the distinct intestinal microbiota of TLR-deficient mice.
Academic Article Early programming of T cell populations responding to bacterial infection.
Academic Article Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota.
Academic Article Rescue of CD8 T cell-mediated antimicrobial immunity with a nonspecific inflammatory stimulus.
Academic Article Vancomycin-resistant enterococci exploit antibiotic-induced innate immune deficits.
Academic Article Prevention of peritransplantation viridans streptococcal bacteremia with early vancomycin administration: a single-center observational cohort study.
Academic Article Essential role for neutrophils but not alveolar macrophages at early time points following Aspergillus fumigatus infection.
Academic Article Rapid expansion of cytomegalovirus-specific cytotoxic T lymphocytes by artificial antigen-presenting cells expressing a single HLA allele.
Academic Article Immunology. Giving credit where credit is due.
Academic Article Innate immune activation and CD4+ T cell priming during respiratory fungal infection.
Academic Article Essential yet limited role for CCR2? inflammatory monocytes during Mycobacterium tuberculosis-specific T cell priming.
Academic Article Priming of memory but not effector CD8 T cells by a killed bacterial vaccine.
Academic Article Chemokine receptor 5 is dispensable for innate and adaptive immune responses to Listeria monocytogenes infection.
Academic Article Cuffed and exposed--perp-walking bradyrhizobium.
Academic Article Quantitative studies of CD8+ T-cell responses during microbial infection.
Academic Article Radical host-specific therapies for TB.
Academic Article Promiscuity of MHC class Ib-restricted T cell responses.
Academic Article A Listeria monocytogenes pentapeptide is presented to cytolytic T lymphocytes by the H2-M3 MHC class Ib molecule.
Academic Article Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant.
Academic Article MyD88 and Type I interferon receptor-mediated chemokine induction and monocyte recruitment during Listeria monocytogenes infection.
Academic Article Voriconazole inhibits fungal growth without impairing antigen presentation or T-cell activation.
Academic Article Immunodominant and subdominant CTL responses to Listeria monocytogenes infection.
Academic Article T lymphocyte dynamics during Listeria monocytogenes infection.
Academic Article Overexpression of IL-15 in vivo increases antigen-driven memory CD8+ T cells following a microbe exposure.
Academic Article Innate immune signaling in defense against intestinal microbes.
Academic Article Monocytic CCR2(+) myeloid-derived suppressor cells promote immune escape by limiting activated CD8 T-cell infiltration into the tumor microenvironment.
Academic Article H2-M3-restricted T cells in bacterial infection: rapid primary but diminished memory responses.
Academic Article T cell responses to bacterial infection.
Academic Article Monocyte trafficking to hepatic sites of bacterial infection is chemokine independent and directed by focal intercellular adhesion molecule-1 expression.
Academic Article Distinct regulation of H2-M3-restricted memory T cell responses in lymph node and spleen.
Academic Article Distinct CD4+-T-cell responses to live and heat-inactivated Aspergillus fumigatus conidia.
Academic Article Fecal microbiota transplantation: effectiveness, complexities, and lingering concerns.
Academic Article Enlisting commensal microbes to resist antibiotic-resistant pathogens.
Academic Article Bone marrow mesenchymal stem and progenitor cells induce monocyte emigration in response to circulating toll-like receptor ligands.
Academic Article Nutritional Support from the Intestinal Microbiota Improves Hematopoietic Reconstitution after Bone Marrow Transplantation in Mice.
Academic Article Antibiotics, microbiota, and immune defense.
Academic Article Ly6G+ neutrophils are dispensable for defense against systemic Listeria monocytogenes infection.
Academic Article Monocytes and infection: modulator, messenger and effector.
Academic Article Monocyte-mediated immune defense against murine Listeria monocytogenes infection.
Academic Article Gut Microbiota Predict Pulmonary Infiltrates after Allogeneic Hematopoietic Cell Transplantation.
Academic Article Distinct behavior of myelomonocytic cells and CD8 T cells underlies the hepatic response to Listeria monocytogenes.
Academic Article Antibiotic-Induced Changes in the Intestinal Microbiota and Disease.
Academic Article Distinct in vivo dendritic cell activation by live versus killed Listeria monocytogenes.
Academic Article Pathogenicity Locus, Core Genome, and Accessory Gene Contributions to Clostridium difficile Virulence.
Academic Article Dectin-1 diversifies Aspergillus fumigatus-specific T cell responses by inhibiting T helper type 1 CD4 T cell differentiation.
Academic Article Influence of Minimum Inhibitory Concentration in Clinical Outcomes of Enterococcus faecium Bacteremia Treated With Daptomycin: Is it Time to Change the Breakpoint?
Academic Article Expression and deletion analysis of the Trypanosoma brucei rhodesiense cysteine protease in Escherichia coli.
Academic Article Homeostasis of na?ve, effector and memory CD8 T cells.
Academic Article Role of the commensal microbiota in normal and pathogenic host immune responses.
Academic Article Predictors for persistent cytomegalovirus reactivation after T-cell-depleted allogeneic hematopoietic stem cell transplantation.
Academic Article IMMUNOTHERAPY. Could microbial therapy boost cancer immunotherapy?
Academic Article Gut microbiota dysbiosis and diarrhea in kidney transplant recipients.
Academic Article The selection of M3-restricted T cells is dependent on M3 expression and presentation of N-formylated peptides in the thymus.
Academic Article Mechanisms of MHC class I--restricted antigen processing.
Academic Article H-2M3 presents a Listeria monocytogenes peptide to cytotoxic T lymphocytes.
Academic Article Processing of Listeria monocytogenes antigens and the in vivo T-cell response to bacterial infection.
Academic Article Intestinal Bile Acids Induce a Morphotype Switch in Vancomycin-Resistant Enterococcus that Facilitates Intestinal Colonization.
Academic Article Expression of cutaneous lymphocyte-associated antigen by CD8(+) T cells specific for a skin-tropic virus.
Academic Article Quantitation, selection, and functional characterization of Epstein-Barr virus-specific and alloreactive T cells detected by intracellular interferon-gamma production and growth of cytotoxic precursors.
Academic Article Immune responses to Listeria monocytogenes.
Academic Article Animal model for infection with Listeria monocytogenes.
Academic Article The oral microbiota in patients with pancreatic cancer, patients with IPMNs, and controls: a pilot study.
Academic Article Memory phenotype CD8(+) T cells in IL-15 transgenic mice are involved in early protection against a primary infection with Listeria monocytogenes.
Academic Article Third-party fecal microbiota transplantation following allo-HCT reconstitutes microbiome diversity.
Academic Article Peptide presentation by the MHC class Ib molecule, H2-M3.
Academic Article Innate Lymphocyte/Ly6C(hi) Monocyte Crosstalk Promotes Klebsiella Pneumoniae Clearance.
Academic Article MHC class I antigen processing of Listeria monocytogenes proteins: implications for dominant and subdominant CTL responses.
Academic Article CD8 T cell responses to infectious pathogens.
Academic Article Variable immunodominance hierarchies for H2-M3-restricted N-formyl peptides following bacterial infection.
Academic Article Minimal residual disease negativity in multiple myeloma is associated with intestinal microbiota composition.
Academic Article Bacterial flagellin stimulates Toll-like receptor 5-dependent defense against vancomycin-resistant Enterococcus infection.
Academic Article CTL epitope generation is tightly linked to cellular proteolysis of a Listeria monocytogenes antigen.
Academic Article Pre- and post-engraftment bloodstream infection rates and associated mortality in allogeneic hematopoietic stem cell transplant recipients.
Academic Article Toll-like receptor 4 polymorphisms and risk of gram-negative bacteremia after allogeneic stem cell transplantation. A prospective pilot study.
Academic Article The CD40-CD154 system in anti-infective host defense.
Academic Article Invasive adenoviral infections in T-cell-depleted allogeneic hematopoietic stem cell transplantation: high mortality in the era of cidofovir.
Academic Article Pathogen-specific CD8 T cell responses are directly inhibited by IL-10.
Academic Article The effects of amine-modified single-walled carbon nanotubes on the mouse microbiota.
Academic Article TLR-7 activation enhances IL-22-mediated colonization resistance against vancomycin-resistant enterococcus.
Academic Article T cell affinity maturation by selective expansion during infection.
Academic Article Immune responses to Aspergillus fumigatus infections.
Academic Article In vivo depletion of CD11c+ dendritic cells abrogates priming of CD8+ T cells by exogenous cell-associated antigens.
Academic Article Distinct Contributions of Neutrophils and CCR2+ Monocytes to Pulmonary Clearance of Different Klebsiella pneumoniae Strains.
Academic Article Intestinal domination and the risk of bacteremia in patients undergoing allogeneic hematopoietic stem cell transplantation.
Academic Article Distinct but Spatially Overlapping Intestinal Niches for Vancomycin-Resistant Enterococcus faecium and Carbapenem-Resistant Klebsiella pneumoniae.
Academic Article Remodeling specific immunity by use of MHC tetramers: demonstration in a graft-versus-host disease model.
Academic Article Microbiota Disruption Induced by Early Use of Broad-Spectrum Antibiotics Is an Independent Risk Factor of Outcome after Allogeneic Stem Cell Transplantation.
Academic Article Do nonclassical, class Ib MHC molecules present bacterial antigens to T cells?
Academic Article Risk factors for late Staphylococcus aureus bacteremia after allogeneic hematopoietic stem cell transplantation: a single-institution, nested case-controlled study.
Academic Article Two Listeria monocytogenes CTL epitopes are processed from the same antigen with different efficiencies.
Academic Article Intestinal Blautia Is Associated with Reduced Death from Graft-versus-Host Disease.
Academic Article The role of CD1-restricted T cells in infectious diseases.
Academic Article MHC class I/peptide stability: implications for immunodominance, in vitro proliferation, and diversity of responding CTL.
Academic Article Clostridium difficile colitis: pathogenesis and host defence.
Academic Article The intestinal microbiota and susceptibility to infection in immunocompromised patients.
Academic Article CD8 T cell detection of bacterial infection: sniffing for formyl peptides derived from Mycobacterium tuberculosis.
Academic Article CD8 T lymphocytes specific for the secreted p60 antigen protect against Listeria monocytogenes infection.
Academic Article Immunology. Dispensable but not irrelevant.
Academic Article Cross-recognition of N-formylmethionine peptides is a general characteristic of H2-M3-restricted CD8+ T cells.
Academic Article Inflammatory monocytes facilitate adaptive CD4 T cell responses during respiratory fungal infection.
Academic Article Commensal microbiota affects ischemic stroke outcome by regulating intestinal ?d T cells.
Academic Article Inflammatory Monocytes Promote Perineural Invasion via CCL2-Mediated Recruitment and Cathepsin B Expression.
Academic Article Gut microbial community structure and complications after kidney transplantation: a pilot study.
Academic Article The effects of intestinal tract bacterial diversity on mortality following allogeneic hematopoietic stem cell transplantation.
Academic Article Control of T cell antigen reactivity via programmed TCR downregulation.
Academic Article In vitro stimulation with WT1 peptide-loaded Epstein-Barr virus-positive B cells elicits high frequencies of WT1 peptide-specific T cells with in vitro and in vivo tumoricidal activity.
Academic Article Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology.
Academic Article Aberrant tissue localization of fungus-specific CD4+ T cells in IL-10-deficient mice.
Academic Article Role of intestinal microbiota in transplantation outcomes.
Academic Article MyD88-mediated signals induce the bactericidal lectin RegIII gamma and protect mice against intestinal Listeria monocytogenes infection.
Academic Article Nfil3 is crucial for development of innate lymphoid cells and host protection against intestinal pathogens.
Academic Article Tipping the balance in favor of protective immunity during influenza virus infection.
Academic Article Distinct responses of human monocyte subsets to Aspergillus fumigatus conidia.
Academic Article Defective CD8+ T cell peripheral tolerance in nonobese diabetic mice.
Academic Article Commensal microbes provide first line defense against Listeria monocytogenes infection.
Academic Article Bacterial pathogens: A spoonful of sugar could be the medicine.
Academic Article Coordinate regulation of complex T cell populations responding to bacterial infection.
Academic Article Breakthrough trichosporonosis in a bone marrow transplant recipient receiving caspofungin acetate.
Academic Article Listeriolysin is processed efficiently into an MHC class I-associated epitope in Listeria monocytogenes-infected cells.
Academic Article Interleukin 23 production by intestinal CD103(+)CD11b(+) dendritic cells in response to bacterial flagellin enhances mucosal innate immune defense.
Academic Article Noncompetitive expansion of cytotoxic T lymphocytes specific for different antigens during bacterial infection.
Academic Article The cellular and molecular origin of tumor-associated macrophages.
Academic Article The fate of low affinity tumor-specific CD8+ T cells in tumor-bearing mice.
Academic Article A protective Langerhans cell-keratinocyte axis that is dysfunctional in photosensitivity.
Academic Article Antigen presentation in the immune response to infectious diseases.
Academic Article A nonamer peptide derived from Listeria monocytogenes metalloprotease is presented to cytolytic T lymphocytes.
Academic Article Defective control of latent Epstein-Barr virus infection in systemic lupus erythematosus.
Academic Article Selective expansion of the monocytic lineage directed by bacterial infection.
Academic Article Clinical characterization of human metapneumovirus infection among patients with cancer.
Academic Article Cell-mediated immunity: the role of bacterial protein secretion.
Academic Article High-level primary CD8(+) T-cell response to human immunodeficiency virus type 1 gag and env generated by vaccination with recombinant vesicular stomatitis viruses.
Academic Article TLR1 and TLR6 polymorphisms are associated with susceptibility to invasive aspergillosis after allogeneic stem cell transplantation.
Academic Article Harnessing microbiota to kill a pathogen: Fixing the microbiota to treat Clostridium difficile infections.
Academic Article Variable binding affinities of listeriolysin O peptides for the H-2Kd class I molecule.
Academic Article Cellular immunity to intracellular bacteria.
Academic Article A recombinant minigene vaccine containing a nonameric cytotoxic-T-lymphocyte epitope confers limited protection against Listeria monocytogenes infection.
Academic Article Absence of MHC class II on cDCs results in microbial-dependent intestinal inflammation.
Academic Article Microbial Tuning of the Mammalian Immune System.
Academic Article Genetic and pharmacological targeting of CSF-1/CSF-1R inhibits tumor-associated macrophages and impairs BRAF-induced thyroid cancer progression.
Academic Article Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis.
Academic Article Rapid development of T cell memory.
Academic Article Early Clostridium difficile infection during allogeneic hematopoietic stem cell transplantation.
Academic Article Sequential MyD88-independent and -dependent activation of innate immune responses to intracellular bacterial infection.
Academic Article Innate Immune Defenses Mediated by Two ILC Subsets Are Critical for Protection against Acute Clostridium difficile Infection.
Academic Article Decreased bacterial diversity characterizes the altered gut microbiota in patients with psoriatic arthritis, resembling dysbiosis in inflammatory bowel disease.
Academic Article Characterization of CD8+ T lymphocytes that persist after peripheral tolerance to a self antigen expressed in the pancreas.
Academic Article MHC class Jb-restricted cell responses to Listeria monocytogenes infection.
Academic Article T cell responses to Listeria monocytogenes.
Academic Article Efficiency of MHC class I antigen processing: a quantitative analysis.
Academic Article 2009 H1N1 influenza infection in cancer patients and hematopoietic stem cell transplant recipients.
Academic Article Perforin-deficient CD8+ T cells: in vivo priming and antigen-specific immunity against Listeria monocytogenes.
Academic Article Protective Factors in the Intestinal Microbiome Against Clostridium difficile Infection in Recipients of Allogeneic Hematopoietic Stem Cell Transplantation.
Academic Article Disparate in vitro and in vivo requirements for IL-2 during antigen-independent CD8 T cell expansion.
Academic Article Toll-like receptor 5 stimulation protects mice from acute Clostridium difficile colitis.
Academic Article Delayed protection by ESAT-6-specific effector CD4+ T cells after airborne M. tuberculosis infection.
Academic Article Transmission of Clostridium difficile During Hospitalization for Allogeneic Stem Cell Transplant.
Academic Article Gut microbiota and tacrolimus dosing in kidney transplantation.
Academic Article Identification of an MHC class I-restricted autoantigen in type 1 diabetes by screening an organ-specific cDNA library.
Academic Article MHC class I restricted T cell responses to Listeria monocytogenes, an intracellular bacterial pathogen.
Academic Article Quantitative assessment of T cell repertoire recovery after hematopoietic stem cell transplantation.
Academic Article Intestinal and splenic T cell responses to enteric Listeria monocytogenes infection: distinct repertoires of responding CD8 T lymphocytes.
Academic Article Coordinate regulation of tissue macrophage and dendritic cell population dynamics by CSF-1.
Academic Article TNF/iNOS-producing dendritic cells mediate innate immune defense against bacterial infection.
Academic Article Short- and long-term effects of oral vancomycin on the human intestinal microbiota.
Academic Article The changing epidemiology of vancomycin-resistant Enterococcus (VRE) bacteremia in allogeneic hematopoietic stem cell transplant (HSCT) recipients.
Academic Article Vancomycin-resistant Enterococcus domination of intestinal microbiota is enabled by antibiotic treatment in mice and precedes bloodstream invasion in humans.
Academic Article Caspofungin modulates inflammatory responses to Aspergillus fumigatus through stage-specific effects on fungal beta-glucan exposure.
Academic Article TLR polymorphisms and the risk of invasive fungal infections.
Academic Article Enhanced intracellular dissociation of major histocompatibility complex class I-associated peptides: a mechanism for optimizing the spectrum of cell surface-presented cytotoxic T lymphocyte epitopes.
Academic Article Effect of antigen-processing efficiency on in vivo T cell response magnitudes.
Academic Article Cutting edge: antigen-independent CD8 T cell proliferation.
Academic Article A gamma interferon independent mechanism of CD4 T cell mediated control of M. tuberculosis infection in vivo.
Academic Article Risk factors and attributable mortality of late aspergillosis after T-cell depleted hematopoietic stem cell transplantation.
Academic Article Direct assessment of MHC class I binding by seven Ly49 inhibitory NK cell receptors.
Academic Article Targeted deletion of T-cell clones using alpha-emitting suicide MHC tetramers.
Academic Article Coordinating innate immune cells to optimize microbial killing.
Academic Article Dynamic imaging of the effector immune response to listeria infection in vivo.
Academic Article Regulation of innate and adaptive immunity by the commensal microbiota.
Academic Article Evolution of a complex T cell receptor repertoire during primary and recall bacterial infection.
Academic Article Microbiota-Based Therapies for Clostridium difficile and Antibiotic-Resistant Enteric Infections.
Academic Article Rapid reconstitution of Epstein-Barr virus-specific T lymphocytes following allogeneic stem cell transplantation.
Academic Article Regulation of intestinal inflammation by microbiota following allogeneic bone marrow transplantation.
Academic Article Infection with Listeria monocytogenes impairs sialic acid addition to host cell glycoproteins.
Academic Article Feedback regulation of pathogen-specific T cell priming.
Academic Article Precise prediction of a dominant class I MHC-restricted epitope of Listeria monocytogenes.
Academic Article Increased GVHD-related mortality with broad-spectrum antibiotic use after allogeneic hematopoietic stem cell transplantation in human patients and mice.
Academic Article Aspergillus fumigatus triggers inflammatory responses by stage-specific beta-glucan display.
Academic Article Robust recall and long-term memory T-cell responses induced by prime-boost regimens with heterologous live viral vectors expressing human immunodeficiency virus type 1 Gag and Env proteins.
Academic Article Cloning and sequencing of the cysteine protease cDNA from Trypanosoma brucei rhodesiense.
Academic Article Adoptive transfer of T-cell precursors enhances T-cell reconstitution after allogeneic hematopoietic stem cell transplantation.
Academic Article H2-M3-restricted memory T cells: persistence and activation without expansion.
Academic Article Impaired recovery of Epstein-Barr virus (EBV)--specific CD8+ T lymphocytes after partially T-depleted allogeneic stem cell transplantation may identify patients at very high risk for progressive EBV reactivation and lymphoproliferative disease.
Academic Article Impact of gut colonization with butyrate-producing microbiota on respiratory viral infection following allo-HCT.
Academic Article Microbiota-derived lantibiotic restores resistance against vancomycin-resistant Enterococcus.
Academic Article Gastrointestinal pathogen colonization and the microbiome in asymptomatic kidney transplant recipients.
Academic Article Butyrate-producing gut bacteria and viral infections in kidney transplant recipients: A pilot study.
Academic Article Lactose drives Enterococcus expansion to promote graft-versus-host disease.
Academic Article Gut uropathogen abundance is a risk factor for development of bacteriuria and urinary tract infection.
Academic Article Impact of TCR Diversity on the Development of Transplanted or Chemically Induced Tumors.
Academic Article Compositional Flux Within the Intestinal Microbiota and Risk for Bloodstream Infection With Gram-negative Bacteria.
Academic Article Microbiota as Predictor of Mortality in Allogeneic Hematopoietic-Cell Transplantation.
Academic Article Outbreaks of Typhlocolitis Caused by Hypervirulent Group ST1 Clostridioides difficile in Highly Immunocompromised Strains of Mice.
Academic Article The microbe-derived short-chain fatty acids butyrate and propionate are associated with protection from chronic GVHD.
Academic Article Enhancing mucosal immunity by transient microbiota depletion.
Academic Article Cervicovaginal bacterial communities in reproductive-aged Tanzanian women with Schistosoma mansoni, Schistosoma haematobium, or without schistosome infection.
Academic Article Fecal microbiota diversity disruption and clinical outcomes after auto-HCT: a multicenter observational study.
Academic Article Rapid transcriptional and metabolic adaptation of intestinal microbes to host immune activation.
Academic Article TAM mediates adaptation of carbapenem-resistant Klebsiella pneumoniae to antimicrobial stress during host colonization and infection.
Academic Article Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients.
Academic Article Author Correction: Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients.
Academic Article A multisite genomic epidemiology study of Clostridioides difficile infections in the USA supports differential roles of healthcare versus community spread for two common strains.
Academic Article Monocyte Reconstitution and Gut Microbiota Composition after Hematopoietic Stem Cell Transplantation.
Academic Article Microbiome-based therapeutics.
Academic Article Gut microbiome correlates of response and toxicity following anti-CD19 CAR T cell therapy.
Academic Article A compilation of fecal microbiome shotgun metagenomics from hematopoietic cell transplantation patients.
Academic Article Translating Microbiome Research From and To the Clinic.
Academic Article Metagenomic and bile acid metabolomic analysis of fecal microbiota transplantation for recurrent Clostridiodes difficile and/or inflammatory bowel diseases.
Academic Article Author Correction: Gut microbiome correlates of response and toxicity following anti-CD19 CAR T cell therapy.
Academic Article A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.
Concept Fecal Microbiota Transplantation
Concept Carbapenem-Resistant Enterobacteriaceae
Concept Time-to-Treatment
Concept Spatio-Temporal Analysis
Concept Transplant Recipients
Concept In Vitro Techniques
Grant CHARACTERIZATION OF A TRYPANSOMA BRUCEI PROTEASE
Grant Innate immune defense against clostridium Difficile Infection
Grant THE ROLE UBIQUITIN IN TRYPANOSOMAL DIFFERENTIATION
Grant Characterization of Aspergillus fumigatus specific CD4 T cell responses.
Grant CC-chemokines in Listeria infection.
Grant Innate Immune Responses to Microbial Flora
Grant Research Training in Infectious Diseases
Grant H2-M3 RESTRICTED T CELL RESPONSES
Grant CD4 T Cell Responses to M. Tuberculosis Infection
Grant Systems Biology of Microbiome-mediated Resilience to Antibiotic-resistant Pathogens
Grant CYTOTOXIC T LYMPHOCYTE RESPONSE TO BACTERIAL INFECTION
Grant Inflammation and T cell immunity to Listeria
Grant A Proposal for a Microbiome Center Conference
Academic Article Assembling symbiotic bacterial species into live therapeutic consortia that reconstitute microbiome functions.
Academic Article High-resolution analyses of associations between medications, microbiome, and mortality in cancer patients.
Academic Article The TaxUMAP atlas: Efficient display of large clinical microbiome data reveals ecological competition in protection against bacteremia.
Academic Article Corrigendum: A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.
Academic Article Fecal metabolite profiling identifies liver transplant recipients at risk for postoperative infection.
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